Genes within 1Mb (chr1:45866967:T:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 79980 eQTL 9.88e-10 0.366 0.0593 0.0 0.0 0.026
ENSG00000126088 UROD 856017 pQTL 1.43e-04 0.187 0.049 0.0 0.0 0.022
ENSG00000126088 UROD 856017 eQTL 4.94e-03 0.179 0.0636 0.0 0.0 0.026
ENSG00000132773 TOE1 526915 eQTL 2.12e-02 -0.0937 0.0406 0.0 0.0 0.026
ENSG00000132780 NASP 283121 eQTL 1.23e-10 -0.315 0.0485 0.00172 0.00315 0.026
ENSG00000159588 CCDC17 242910 eQTL 1.44e-12 -0.305 0.0425 0.0 0.0 0.026
ENSG00000159592 GPBP1L1 178854 eQTL 9.58e-03 0.085 0.0327 0.0 0.0 0.026
ENSG00000159658 EFCAB14 -852147 eQTL 2.32e-03 -0.178 0.0584 0.0 0.0 0.026
ENSG00000162415 ZSWIM5 560758 eQTL 6.23e-03 -0.176 0.0642 0.0 0.0 0.026
ENSG00000232022 FAAHP1 -565162 eQTL 2.53e-02 -0.205 0.0916 0.0 0.0 0.026
ENSG00000281912 LINC01144 563057 eQTL 3.39e-02 0.219 0.103 0.0 0.0 0.026


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000085999 \N -380721 1.31e-06 9.07e-07 3.27e-07 3.96e-07 9.72e-08 3.36e-07 7.32e-07 1.38e-07 8.39e-07 2.67e-07 1.04e-06 5.22e-07 1.48e-06 2.68e-07 4.32e-07 5.29e-07 3.75e-07 5.2e-07 4e-07 1.86e-07 2.5e-07 5.69e-07 5.41e-07 1.91e-07 1.64e-06 2.55e-07 6.16e-07 4.4e-07 6.47e-07 7.42e-07 4.26e-07 5.77e-08 5.86e-08 2.33e-07 3.66e-07 1.66e-07 1.4e-07 1.09e-07 1.13e-07 4.12e-08 1.04e-07 1.05e-06 6.53e-08 1.29e-08 1.58e-07 7.29e-08 1.54e-07 8.49e-08 5.43e-08
ENSG00000086015 MAST2 79980 9.98e-06 9.98e-06 1.32e-06 5.03e-06 1.73e-06 3.9e-06 9.8e-06 1.5e-06 7.74e-06 4.75e-06 1.09e-05 4.46e-06 1.3e-05 3.85e-06 2.24e-06 6.35e-06 3.75e-06 5.77e-06 2.26e-06 2.27e-06 4.38e-06 7.98e-06 6.87e-06 1.97e-06 1.25e-05 2.79e-06 4.8e-06 3.29e-06 8.01e-06 7.69e-06 4.54e-06 5.57e-07 6.91e-07 2.71e-06 3.56e-06 1.71e-06 1.19e-06 6.18e-07 1.57e-06 1.02e-06 7.37e-07 1.28e-05 1.39e-06 1.53e-07 7.72e-07 1.07e-06 9.67e-07 6.58e-07 6.04e-07
ENSG00000117448 \N 316424 1.44e-06 9.28e-07 2.43e-07 1.11e-06 9.9e-08 4.79e-07 1.33e-06 2.66e-07 1.28e-06 4.36e-07 1.38e-06 6.02e-07 2.01e-06 2.89e-07 5.37e-07 8.25e-07 7.62e-07 6.45e-07 7.25e-07 4.32e-07 3.5e-07 1.17e-06 8.6e-07 4.22e-07 2.16e-06 4.32e-07 8.99e-07 7.26e-07 1.17e-06 1.03e-06 5.79e-07 3.87e-08 1.49e-07 5.18e-07 5.85e-07 3.35e-07 3.81e-07 1.36e-07 3.33e-07 3.02e-07 1.98e-07 1.51e-06 1.09e-07 4.19e-08 1.82e-07 1.26e-07 1.87e-07 6.95e-08 5.47e-08
ENSG00000126088 UROD 856017 3.07e-07 1.3e-07 6.55e-08 1.9e-07 8.83e-08 9.91e-08 1.6e-07 5.33e-08 1.45e-07 5.67e-08 1.57e-07 8.55e-08 1.69e-07 7.64e-08 5.82e-08 7.5e-08 3.94e-08 1.4e-07 6.32e-08 4.04e-08 1.13e-07 1.27e-07 1.44e-07 3.68e-08 1.55e-07 1.25e-07 1.13e-07 9.74e-08 1.16e-07 1.07e-07 9.92e-08 3.65e-08 3.35e-08 8.11e-08 4.84e-08 3.6e-08 5.11e-08 9.22e-08 6.86e-08 4.19e-08 5.13e-08 1.33e-07 5.2e-08 1.12e-08 3.84e-08 1.77e-08 1.18e-07 1.88e-09 5.09e-08
ENSG00000126107 \N 855643 3.07e-07 1.3e-07 6.55e-08 1.89e-07 8.83e-08 9.91e-08 1.6e-07 5.33e-08 1.45e-07 5.67e-08 1.57e-07 8.55e-08 1.69e-07 7.64e-08 5.82e-08 7.5e-08 3.94e-08 1.4e-07 6.32e-08 4.04e-08 1.13e-07 1.27e-07 1.44e-07 3.68e-08 1.55e-07 1.25e-07 1.13e-07 9.74e-08 1.16e-07 1.07e-07 9.92e-08 3.65e-08 3.35e-08 8.11e-08 4.84e-08 3.6e-08 5.11e-08 9.22e-08 6.86e-08 4.19e-08 5.13e-08 1.33e-07 5.2e-08 1.12e-08 3.84e-08 1.77e-08 1.18e-07 1.88e-09 5.09e-08
ENSG00000132780 NASP 283121 1.73e-06 1.13e-06 2.16e-07 1.26e-06 1.96e-07 5.83e-07 1.53e-06 3.33e-07 1.38e-06 6.24e-07 1.79e-06 6.45e-07 2.51e-06 4.19e-07 4.37e-07 9.51e-07 7.91e-07 9.1e-07 8.15e-07 6.72e-07 5.8e-07 1.63e-06 8.92e-07 5.6e-07 2.25e-06 6.58e-07 1.02e-06 8.37e-07 1.38e-06 1.26e-06 6.68e-07 1.55e-07 2.14e-07 6.95e-07 5.15e-07 4.47e-07 5.32e-07 1.25e-07 4.97e-07 2.94e-07 2.84e-07 1.58e-06 3.01e-07 6.55e-08 1.93e-07 2.13e-07 2.36e-07 5.98e-08 8.28e-08
ENSG00000159588 CCDC17 242910 2.66e-06 2.14e-06 2.46e-07 1.53e-06 3.4e-07 6.47e-07 1.26e-06 3.69e-07 1.7e-06 6.94e-07 2.06e-06 1.01e-06 2.67e-06 9.33e-07 5.01e-07 1.06e-06 8.85e-07 1.29e-06 5.56e-07 5.27e-07 7.54e-07 1.97e-06 1.38e-06 5.43e-07 2.5e-06 9.13e-07 1.16e-06 1.01e-06 1.7e-06 1.23e-06 8.43e-07 2.89e-07 2.9e-07 5.48e-07 8.75e-07 4.3e-07 6.97e-07 2.42e-07 5.37e-07 2.33e-07 2.88e-07 2.5e-06 4.13e-07 1.38e-07 1.79e-07 3.43e-07 2.28e-07 2.11e-07 1.36e-07
ENSG00000159592 GPBP1L1 178854 4.18e-06 3.74e-06 6.03e-07 2.02e-06 4.59e-07 7.56e-07 2.45e-06 5.89e-07 2.36e-06 1.4e-06 2.77e-06 1.44e-06 4.84e-06 1.37e-06 1.07e-06 2e-06 1.1e-06 2.11e-06 1.42e-06 1.15e-06 1.19e-06 3.14e-06 2.62e-06 1.04e-06 4.27e-06 1.02e-06 1.8e-06 1.77e-06 2.69e-06 1.79e-06 2.03e-06 3.41e-07 6.43e-07 1.25e-06 1.72e-06 8.7e-07 8.03e-07 4.1e-07 1.18e-06 3.28e-07 3.05e-07 4.17e-06 4.64e-07 2.07e-07 3.75e-07 3.73e-07 7.57e-07 2.02e-07 2.14e-07
ENSG00000162415 ZSWIM5 560758 8.25e-07 2.5e-07 1.14e-07 2.87e-07 9.82e-08 1.32e-07 3.44e-07 5.68e-08 2.26e-07 1.46e-07 2.18e-07 1.62e-07 4.88e-07 1.07e-07 1.51e-07 1.49e-07 4.63e-08 2.93e-07 1.27e-07 6.29e-08 1.33e-07 2.07e-07 2.04e-07 4.17e-08 3.98e-07 2.01e-07 1.85e-07 1.7e-07 1.58e-07 1.59e-07 1.59e-07 4.43e-08 4.16e-08 1.02e-07 1.83e-07 3.5e-08 6.14e-08 7.63e-08 4.72e-08 7.39e-08 5.04e-08 2.6e-07 2.94e-08 1.8e-08 5.32e-08 1.37e-08 9.12e-08 2.85e-09 4.85e-08
ENSG00000281912 LINC01144 563057 8.43e-07 2.5e-07 1.12e-07 2.92e-07 9.82e-08 1.32e-07 3.44e-07 5.56e-08 2.26e-07 1.46e-07 2.18e-07 1.62e-07 4.74e-07 1.07e-07 1.51e-07 1.46e-07 4.63e-08 2.9e-07 1.13e-07 6.29e-08 1.33e-07 2.07e-07 2.04e-07 4.07e-08 3.98e-07 2.01e-07 1.85e-07 1.68e-07 1.58e-07 1.59e-07 1.52e-07 4.43e-08 3.8e-08 1.02e-07 1.76e-07 3.5e-08 6.14e-08 7.63e-08 4.99e-08 7.39e-08 5.04e-08 2.6e-07 2.94e-08 1.8e-08 4.99e-08 1.35e-08 9.12e-08 2.8e-09 4.85e-08