Genes within 1Mb (chr1:45838367:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 347204 eQTL 2.01e-02 0.0718 0.0308 0.0 0.0 0.0594
ENSG00000086015 MAST2 51380 eQTL 8.21e-18 0.344 0.0392 0.0 0.0 0.0594
ENSG00000117425 PTCH2 995114 eQTL 3.17e-02 0.105 0.0489 0.0 0.0 0.0594
ENSG00000117448 AKR1A1 287824 eQTL 2.11e-04 -0.0862 0.0232 0.0 0.00104 0.0594
ENSG00000117461 PIK3R3 -294669 eQTL 3.62e-02 -0.0875 0.0417 0.0 0.0 0.0594
ENSG00000117480 FAAH -555950 eQTL 1.77e-03 0.137 0.0437 0.0 0.0 0.0594
ENSG00000117481 NSUN4 -501810 eQTL 2.77e-04 0.183 0.05 0.0 0.0 0.0594
ENSG00000126088 UROD 827417 pQTL 1.63e-02 0.0739 0.0307 0.0 0.0 0.0578
ENSG00000132773 TOE1 498315 eQTL 6.68e-03 -0.0743 0.0273 0.0 0.0 0.0594
ENSG00000132780 NASP 254521 eQTL 2.79e-10 -0.209 0.0327 0.0 0.0 0.0594
ENSG00000159588 CCDC17 214310 eQTL 2.65e-31 -0.33 0.0274 0.0 0.0 0.0594
ENSG00000159592 GPBP1L1 150254 eQTL 1.05e-02 0.0566 0.0221 0.0 0.0 0.0594
ENSG00000162415 ZSWIM5 532158 eQTL 4.68e-02 -0.0863 0.0433 0.0 0.0 0.0594
ENSG00000197429 IPP 87717 eQTL 1.43e-02 -0.103 0.0419 0.0 0.0 0.0594
ENSG00000225447 RPS15AP10 192170 eQTL 1.33e-02 -0.171 0.069 0.0 0.0 0.0594
ENSG00000230896 AL604028.1 141292 eQTL 2.78e-02 -0.172 0.0781 0.0 0.0 0.0594
ENSG00000232022 FAAHP1 -593762 eQTL 3.58e-02 -0.13 0.0618 0.0 0.0 0.0594
ENSG00000281912 LINC01144 534457 eQTL 1.31e-04 0.265 0.0691 0.00194 0.00201 0.0594


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 347204 1.28e-06 9.07e-07 3.27e-07 5.88e-07 2.58e-07 4.59e-07 1.16e-06 3.31e-07 1.14e-06 3.82e-07 1.35e-06 5.97e-07 1.75e-06 2.68e-07 4.35e-07 7.13e-07 8.28e-07 5.63e-07 5.26e-07 6.97e-07 3.99e-07 1.17e-06 8.1e-07 5.82e-07 1.94e-06 3.63e-07 6.7e-07 6.51e-07 1.05e-06 1.09e-06 5.3e-07 1.58e-07 2.36e-07 5.18e-07 4.4e-07 4.15e-07 4.92e-07 1.54e-07 3.2e-07 1.16e-07 2.88e-07 1.44e-06 5.37e-08 4.2e-08 1.81e-07 7.91e-08 2.21e-07 8.87e-08 8.28e-08
ENSG00000086015 MAST2 51380 1e-05 1.08e-05 1.87e-06 6.41e-06 2.36e-06 5.16e-06 1.18e-05 2.12e-06 1e-05 5.36e-06 1.3e-05 5.78e-06 1.7e-05 3.5e-06 3.18e-06 6.74e-06 4.97e-06 8.43e-06 3.09e-06 2.92e-06 6.11e-06 1.04e-05 9.78e-06 3.47e-06 1.61e-05 4.45e-06 5.62e-06 4.61e-06 1.21e-05 1e-05 6.24e-06 9.67e-07 1.22e-06 3.72e-06 4.88e-06 2.68e-06 1.79e-06 2.06e-06 2.01e-06 1.1e-06 1.11e-06 1.3e-05 1.44e-06 2.52e-07 9.55e-07 1.7e-06 1.8e-06 6.45e-07 4.51e-07
ENSG00000117425 PTCH2 995114 2.74e-07 1.3e-07 4.91e-08 1.86e-07 9.25e-08 9.9e-08 1.61e-07 5.43e-08 1.45e-07 4.94e-08 1.54e-07 9e-08 1.47e-07 6.76e-08 5.91e-08 7.36e-08 4.17e-08 1.27e-07 5.82e-08 4.23e-08 1.19e-07 1.24e-07 1.44e-07 3.03e-08 1.46e-07 1.21e-07 1.07e-07 9.61e-08 1.12e-07 1.03e-07 9.7e-08 3.08e-08 3.66e-08 8e-08 6.67e-08 3.49e-08 5.04e-08 8.71e-08 6.59e-08 3.76e-08 4.92e-08 1.36e-07 5.21e-08 1.88e-08 4.7e-08 1.84e-08 1.21e-07 1.88e-09 4.9e-08
ENSG00000117448 AKR1A1 287824 1.28e-06 1.07e-06 2.74e-07 1.13e-06 3.71e-07 5.98e-07 1.48e-06 3.81e-07 1.44e-06 6.18e-07 1.88e-06 7.85e-07 2.5e-06 2.74e-07 5.01e-07 9.37e-07 9.23e-07 7.94e-07 8.59e-07 5.27e-07 8.02e-07 1.78e-06 9.91e-07 5.41e-07 2.31e-06 6.68e-07 9.3e-07 9.36e-07 1.48e-06 1.21e-06 7.47e-07 2.7e-07 3.01e-07 6.27e-07 5.31e-07 4.74e-07 7.15e-07 2.97e-07 4.41e-07 2.99e-07 3.35e-07 1.62e-06 1.24e-07 1.3e-07 3.07e-07 1.35e-07 2.46e-07 8.15e-08 1.58e-07
ENSG00000117481 NSUN4 -501810 7.87e-07 4.97e-07 1.12e-07 3.57e-07 9.45e-08 2.09e-07 5.31e-07 1.31e-07 4.19e-07 2.28e-07 5.73e-07 3.61e-07 7.36e-07 1.1e-07 2.14e-07 2.18e-07 2.77e-07 3.79e-07 1.89e-07 1.53e-07 1.97e-07 3.71e-07 3.3e-07 1.61e-07 6.87e-07 2.4e-07 2.56e-07 2.68e-07 3.58e-07 4.9e-07 2.54e-07 6.7e-08 4.28e-08 1.42e-07 3.08e-07 7.68e-08 1.09e-07 1.09e-07 6.72e-08 2.53e-08 1.23e-07 4.68e-07 2.88e-08 1.04e-08 1.25e-07 1.59e-08 1.21e-07 1.77e-08 5.65e-08
ENSG00000132773 TOE1 498315 7.87e-07 5.18e-07 1.14e-07 3.61e-07 9.29e-08 2.08e-07 5.31e-07 1.38e-07 4.18e-07 2.28e-07 5.93e-07 3.68e-07 7.53e-07 1.17e-07 2.18e-07 2.1e-07 2.98e-07 3.79e-07 1.89e-07 1.55e-07 1.97e-07 3.87e-07 3.45e-07 1.63e-07 7.01e-07 2.4e-07 2.62e-07 2.65e-07 3.83e-07 5.17e-07 2.54e-07 6.77e-08 4.35e-08 1.49e-07 3.36e-07 8.32e-08 1.11e-07 1.11e-07 6.81e-08 2.56e-08 1.16e-07 4.82e-07 2.92e-08 1.05e-08 1.27e-07 1.61e-08 1.18e-07 1.79e-08 5.43e-08
ENSG00000132780 NASP 254521 1.32e-06 1.47e-06 2.52e-07 1.28e-06 4.22e-07 6.48e-07 1.21e-06 4.33e-07 1.73e-06 6.9e-07 2.07e-06 1.12e-06 2.56e-06 3.58e-07 3.98e-07 9.77e-07 9.94e-07 1.1e-06 5.84e-07 5.44e-07 6.67e-07 1.92e-06 1.38e-06 6.91e-07 2.34e-06 8.38e-07 9.78e-07 9.36e-07 1.64e-06 1.3e-06 8.3e-07 2.81e-07 3.45e-07 6.34e-07 7.04e-07 5.24e-07 7.21e-07 3.46e-07 4.94e-07 2.06e-07 3.03e-07 2.01e-06 2.92e-07 1.74e-07 3.73e-07 2.29e-07 3.64e-07 1.96e-07 2.59e-07
ENSG00000159588 CCDC17 214310 1.99e-06 2.43e-06 3.08e-07 1.63e-06 4.82e-07 8.03e-07 1.41e-06 5.78e-07 1.67e-06 7.7e-07 1.92e-06 1.48e-06 3.42e-06 9.52e-07 5.68e-07 1.19e-06 1.01e-06 1.62e-06 6.34e-07 1.13e-06 9e-07 2.34e-06 2e-06 9.56e-07 2.73e-06 1.2e-06 1.19e-06 1.38e-06 1.85e-06 1.63e-06 1.08e-06 3.21e-07 4.3e-07 1.24e-06 9.21e-07 7.27e-07 8.6e-07 4.24e-07 9.94e-07 3.32e-07 1.96e-07 2.84e-06 4.13e-07 2.15e-07 3.42e-07 2.99e-07 6.27e-07 2.23e-07 2.41e-07
ENSG00000159592 GPBP1L1 150254 4.19e-06 4.23e-06 7.63e-07 2.1e-06 1.08e-06 1.09e-06 2.91e-06 9.27e-07 3.13e-06 1.73e-06 4e-06 2.55e-06 6.49e-06 1.34e-06 1.2e-06 2.42e-06 1.8e-06 2.66e-06 1.46e-06 9.53e-07 1.99e-06 3.92e-06 3.46e-06 1.71e-06 4.77e-06 1.32e-06 1.9e-06 1.4e-06 4.2e-06 3.38e-06 1.93e-06 5.42e-07 7.94e-07 1.92e-06 1.97e-06 8.71e-07 8.96e-07 4.93e-07 1.05e-06 3.45e-07 4.96e-07 5.01e-06 4.62e-07 1.79e-07 4.2e-07 3.22e-07 8.07e-07 2.72e-07 3.21e-07
ENSG00000230896 AL604028.1 141292 4.25e-06 4.65e-06 8.3e-07 2.43e-06 1.2e-06 1.27e-06 3.38e-06 9.54e-07 3.82e-06 1.99e-06 4.14e-06 3.21e-06 7.2e-06 1.9e-06 1.42e-06 2.63e-06 1.99e-06 2.74e-06 1.33e-06 9.49e-07 2.65e-06 4.23e-06 3.51e-06 1.62e-06 4.97e-06 1.54e-06 2.43e-06 1.77e-06 4.3e-06 3.82e-06 1.93e-06 4.91e-07 7.52e-07 1.71e-06 2.1e-06 1.02e-06 9.36e-07 4.26e-07 9.49e-07 3.22e-07 6.18e-07 4.86e-06 3.78e-07 1.66e-07 4.54e-07 3.94e-07 8.71e-07 4.41e-07 3.41e-07
ENSG00000234329 \N 186541 2.64e-06 2.63e-06 4.65e-07 2.01e-06 6.04e-07 8.08e-07 2.18e-06 7.58e-07 1.98e-06 1.1e-06 2.49e-06 1.46e-06 3.69e-06 1.35e-06 9.11e-07 1.7e-06 1.27e-06 2.31e-06 1.22e-06 1.44e-06 1.38e-06 3.02e-06 2.68e-06 1.24e-06 3.8e-06 1.06e-06 1.42e-06 1.85e-06 2.61e-06 1.98e-06 1.89e-06 4.17e-07 5.91e-07 1.35e-06 1.47e-06 9.87e-07 8.71e-07 4.22e-07 1.35e-06 4.35e-07 2.66e-07 3.49e-06 5.2e-07 1.87e-07 3.52e-07 3.13e-07 8.94e-07 1.99e-07 1.54e-07
ENSG00000281912 LINC01144 534457 6.97e-07 3.77e-07 1.08e-07 3.57e-07 1.07e-07 1.71e-07 4.93e-07 9.91e-08 3.17e-07 2.01e-07 4.39e-07 3.21e-07 6.08e-07 1.07e-07 1.57e-07 1.92e-07 2.07e-07 3.3e-07 1.55e-07 1.24e-07 1.89e-07 3.1e-07 3.03e-07 1.25e-07 5.75e-07 2.36e-07 2.24e-07 2.13e-07 2.84e-07 3.71e-07 2e-07 7.12e-08 5.58e-08 1.25e-07 2.82e-07 6.94e-08 1.03e-07 7.64e-08 4.44e-08 5.61e-08 8.75e-08 3.73e-07 1.7e-08 1.94e-08 1.1e-07 1.75e-08 8.84e-08 1.15e-08 5.54e-08