Genes within 1Mb (chr1:45803954:A:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 16967 eQTL 7.73e-19 0.379 0.0419 0.0 0.0 0.0496
ENSG00000117425 PTCH2 960701 eQTL 1.05e-02 0.134 0.0523 0.00107 0.0 0.0496
ENSG00000117448 AKR1A1 253411 eQTL 2.32e-02 -0.0567 0.0249 0.0 0.0 0.0496
ENSG00000117461 PIK3R3 -329082 eQTL 3.13e-02 -0.0964 0.0447 0.0 0.0 0.0496
ENSG00000126088 UROD 793004 pQTL 5.41e-04 0.115 0.0332 0.0 0.0 0.0477
ENSG00000126088 UROD 793004 eQTL 8.30e-03 0.121 0.0459 0.0 0.0 0.0496
ENSG00000132773 TOE1 463902 eQTL 2.45e-02 -0.066 0.0293 0.0 0.0 0.0496
ENSG00000132780 NASP 220108 eQTL 6.05e-11 -0.231 0.035 0.00267 0.00266 0.0496
ENSG00000159588 CCDC17 179897 eQTL 2.93e-22 -0.298 0.03 0.0 0.0 0.0496
ENSG00000159592 GPBP1L1 115841 eQTL 5.85e-03 0.0653 0.0236 0.0 0.0 0.0496
ENSG00000162415 ZSWIM5 497745 eQTL 2.03e-02 -0.108 0.0464 0.0 0.0 0.0496
ENSG00000197429 IPP 53304 eQTL 3.45e-02 -0.0951 0.0449 0.0 0.0 0.0496
ENSG00000222009 BTBD19 995472 eQTL 9.42e-05 -0.127 0.0324 0.0 0.0 0.0496
ENSG00000232022 FAAHP1 -628175 eQTL 5.10e-03 -0.185 0.066 0.00112 0.0 0.0496
ENSG00000234329 AL604028.2 152128 eQTL 6.69e-03 -0.149 0.0548 0.0 0.0 0.0496
ENSG00000281912 LINC01144 500044 eQTL 1.28e-03 0.24 0.0742 0.0 0.0 0.0496


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 16967 0.000145 9.05e-05 1.28e-05 2.31e-05 9.39e-06 3.35e-05 9.17e-05 7.79e-06 6.68e-05 2.58e-05 8.1e-05 3.51e-05 0.000104 3.31e-05 1.24e-05 4.96e-05 4.22e-05 4.77e-05 1.38e-05 1.09e-05 2.77e-05 7.97e-05 7.94e-05 1.44e-05 8.36e-05 1.77e-05 2.97e-05 2.28e-05 7.13e-05 5.07e-05 4.44e-05 2.31e-06 4.66e-06 8.99e-06 1.9e-05 8.39e-06 4.14e-06 4.16e-06 6.91e-06 4.25e-06 1.86e-06 8.87e-05 1.1e-05 4.37e-07 5.78e-06 6.48e-06 7.19e-06 2.65e-06 1.89e-06
ENSG00000117425 PTCH2 960701 2.66e-07 1.16e-07 3.65e-08 1.7e-07 9.91e-08 9.32e-08 1.42e-07 5.29e-08 1.42e-07 4.23e-08 1.6e-07 8.03e-08 1.26e-07 6.21e-08 4.89e-08 7.87e-08 5.1e-08 1.07e-07 5.22e-08 2.88e-08 1.06e-07 1.3e-07 1.29e-07 5.01e-08 1.31e-07 1.13e-07 1.11e-07 8.45e-08 9.88e-08 1.1e-07 9.58e-08 3.41e-08 2.75e-08 8.3e-08 9.69e-08 4.19e-08 4.67e-08 8.78e-08 8.22e-08 3.8e-08 3.07e-08 1.35e-07 4.51e-08 1.11e-08 1.15e-07 1.74e-08 1.46e-07 4.96e-09 4.61e-08
ENSG00000117448 AKR1A1 253411 1.29e-06 2.49e-06 4.64e-07 1.27e-06 4.25e-07 6.25e-07 1.46e-06 2.98e-07 1.72e-06 6.94e-07 1.91e-06 1.32e-06 2.68e-06 1.36e-06 3.63e-07 9.51e-07 1.07e-06 1.32e-06 7.13e-07 6.79e-07 7.19e-07 1.97e-06 1.05e-06 6.28e-07 2.43e-06 9.84e-07 7.97e-07 1.04e-06 1.49e-06 1.31e-06 7.57e-07 2.89e-07 2.34e-07 1.25e-06 5.46e-07 5.4e-07 9.22e-07 3.5e-07 4.96e-07 1.3e-07 1.09e-07 2.63e-06 3.78e-07 1.62e-07 1.49e-07 3.31e-07 1.8e-07 5.28e-08 2.91e-07
ENSG00000126088 UROD 793004 2.61e-07 1.36e-07 3.69e-08 1.79e-07 9.02e-08 9.87e-08 1.42e-07 5.24e-08 1.4e-07 4.24e-08 1.57e-07 8.36e-08 1.41e-07 7.37e-08 5.44e-08 7.5e-08 4.94e-08 1.14e-07 5.19e-08 3.15e-08 1.04e-07 1.27e-07 1.32e-07 4.99e-08 1.37e-07 1.14e-07 1.13e-07 8.71e-08 1.05e-07 1.11e-07 9.91e-08 3.52e-08 2.74e-08 8.65e-08 9.14e-08 3.93e-08 5.05e-08 9.26e-08 8.3e-08 3.64e-08 3.46e-08 1.46e-07 3.91e-08 1.43e-08 1.12e-07 1.66e-08 1.45e-07 4.82e-09 4.61e-08
ENSG00000132780 NASP 220108 1.4e-06 4.16e-06 8.35e-07 1.76e-06 5.29e-07 7.89e-07 1.31e-06 4.04e-07 2.07e-06 9.75e-07 2.51e-06 1.53e-06 3.5e-06 2.34e-06 8.91e-07 1.18e-06 1.56e-06 2.2e-06 1.42e-06 5.9e-07 1.56e-06 3.14e-06 1.78e-06 6.79e-07 3.75e-06 1.09e-06 1.06e-06 1.75e-06 1.63e-06 1.85e-06 2.01e-06 3.44e-07 2.88e-07 1.73e-06 9.17e-07 9.27e-07 1.08e-06 4.5e-07 1.13e-06 2.44e-07 2.77e-07 3.56e-06 4.65e-07 1.51e-07 1.86e-07 3.54e-07 2.27e-07 2.42e-07 1.78e-07
ENSG00000159588 CCDC17 179897 3.53e-06 6.7e-06 1.22e-06 2.79e-06 1.59e-06 9.7e-07 2.98e-06 6.19e-07 5.06e-06 2.48e-06 4.85e-06 3.35e-06 7.1e-06 3.47e-06 1.21e-06 3.4e-06 2.94e-06 3.83e-06 1.81e-06 8.79e-07 2.67e-06 4.9e-06 3.35e-06 1.84e-06 6.48e-06 1.98e-06 1.9e-06 1.63e-06 3.76e-06 4.04e-06 2.91e-06 5.03e-07 5.65e-07 2.19e-06 2.03e-06 1.18e-06 1.78e-06 4.71e-07 9.24e-07 3.28e-07 3.58e-07 5.76e-06 8.6e-07 1.32e-07 3.12e-07 1.21e-06 7.71e-07 5.67e-07 5.81e-07
ENSG00000159592 GPBP1L1 115841 9.27e-06 1.71e-05 5.5e-06 6.54e-06 2.41e-06 3.82e-06 1.16e-05 1.59e-06 1.29e-05 6.44e-06 1.24e-05 6.5e-06 1.71e-05 7.1e-06 4.38e-06 8.93e-06 8.88e-06 1e-05 4.36e-06 2.83e-06 6.73e-06 1.25e-05 1.02e-05 3.27e-06 2.1e-05 4.5e-06 6.4e-06 5.2e-06 1.14e-05 9.19e-06 7.81e-06 1.12e-06 8.15e-07 3.54e-06 4.71e-06 2.85e-06 2.34e-06 2.12e-06 2.19e-06 1.01e-06 8.36e-07 1.48e-05 2.67e-06 3.43e-07 9.54e-07 1.76e-06 1.79e-06 9.11e-07 6.24e-07
ENSG00000173660 \N -499744 3.21e-07 6.42e-07 7.97e-08 2.44e-07 1.07e-07 1.13e-07 2.95e-07 5.2e-08 2.04e-07 8.53e-08 4.64e-07 2.28e-07 4.74e-07 1.59e-07 6.12e-08 9.11e-08 5.27e-08 2.66e-07 7.53e-08 4.04e-08 1.48e-07 2.48e-07 1.89e-07 3.03e-08 3.55e-07 1.9e-07 1.13e-07 1.52e-07 1.36e-07 1.81e-07 1.78e-07 4.09e-08 3.56e-08 1.24e-07 3.57e-08 2.68e-08 1.14e-07 8.76e-08 6.45e-08 3.8e-08 4.44e-08 4.82e-07 4.87e-08 4.11e-08 8.16e-08 1.35e-08 1.23e-07 4.09e-09 5.04e-08
ENSG00000222009 BTBD19 995472 2.66e-07 1.11e-07 3.69e-08 1.7e-07 9.91e-08 9.32e-08 1.42e-07 5.29e-08 1.37e-07 4.23e-08 1.62e-07 8.03e-08 1.27e-07 6.21e-08 4.89e-08 7.87e-08 5.12e-08 1.07e-07 5.12e-08 2.88e-08 1.03e-07 1.3e-07 1.29e-07 5.19e-08 1.29e-07 1.13e-07 1.11e-07 8.45e-08 9.97e-08 1.1e-07 9.58e-08 3.19e-08 2.75e-08 8.02e-08 9.69e-08 4.19e-08 4.51e-08 8.78e-08 8.14e-08 3.8e-08 3.18e-08 1.33e-07 4.51e-08 1.32e-08 1.15e-07 1.74e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000234329 AL604028.2 152128 4.64e-06 9.73e-06 2.5e-06 3.81e-06 1.98e-06 1.56e-06 7.49e-06 9.55e-07 6.39e-06 4.35e-06 8.01e-06 3.84e-06 1.01e-05 3.6e-06 2.11e-06 5.33e-06 4.59e-06 4.19e-06 2.66e-06 1.51e-06 4.56e-06 7.66e-06 4.84e-06 1.94e-06 1.01e-05 2.82e-06 2.79e-06 2.81e-06 5.3e-06 6.42e-06 4.1e-06 1.07e-06 7.51e-07 2.77e-06 1.95e-06 2.1e-06 1.68e-06 1.66e-06 1.38e-06 4.56e-07 2.54e-07 8.07e-06 1.49e-06 2.1e-07 5.92e-07 1.2e-06 1.04e-06 6.94e-07 4.27e-07
ENSG00000281912 LINC01144 500044 3.21e-07 6.42e-07 7.97e-08 2.44e-07 1.07e-07 1.13e-07 2.95e-07 5.2e-08 2.04e-07 8.53e-08 4.64e-07 2.28e-07 4.74e-07 1.59e-07 6.12e-08 9.11e-08 5.27e-08 2.66e-07 7.53e-08 4.04e-08 1.48e-07 2.48e-07 1.89e-07 3.03e-08 3.55e-07 1.9e-07 1.13e-07 1.52e-07 1.36e-07 1.81e-07 1.78e-07 4.09e-08 3.56e-08 1.21e-07 3.57e-08 2.68e-08 1.14e-07 8.76e-08 6.45e-08 3.8e-08 4.44e-08 4.82e-07 4.87e-08 4.11e-08 8.16e-08 1.32e-08 1.23e-07 4.09e-09 5.04e-08