Genes within 1Mb (chr1:45796623:T:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 305460 eQTL 2.08e-02 0.0711 0.0307 0.0 0.0 0.0608
ENSG00000086015 MAST2 9636 eQTL 3.74e-18 0.346 0.039 0.0 0.0 0.0608
ENSG00000117425 PTCH2 953370 eQTL 2.32e-02 0.111 0.0486 0.0 0.0 0.0608
ENSG00000117448 AKR1A1 246080 eQTL 1.48e-04 -0.0879 0.0231 0.00109 0.0016 0.0608
ENSG00000117461 PIK3R3 -336413 eQTL 4.50e-02 -0.0834 0.0416 0.0 0.0 0.0608
ENSG00000117480 FAAH -597694 eQTL 2.32e-03 0.133 0.0435 0.0 0.0 0.0608
ENSG00000117481 NSUN4 -543554 eQTL 3.97e-04 0.177 0.0499 0.0 0.0 0.0608
ENSG00000126088 UROD 785673 pQTL 1.72e-02 0.073 0.0306 0.0 0.0 0.0592
ENSG00000132773 TOE1 456571 eQTL 4.89e-03 -0.0768 0.0272 0.0 0.0 0.0608
ENSG00000132780 NASP 212777 eQTL 1.33e-10 -0.211 0.0325 0.00156 0.0014 0.0608
ENSG00000159588 CCDC17 172566 eQTL 2.59e-31 -0.329 0.0272 0.0 0.0 0.0608
ENSG00000159592 GPBP1L1 108510 eQTL 1.16e-02 0.0556 0.022 0.0 0.0 0.0608
ENSG00000197429 IPP 45973 eQTL 1.71e-02 -0.0997 0.0417 0.0 0.0 0.0608
ENSG00000222009 BTBD19 988141 eQTL 4.30e-03 -0.0865 0.0302 0.0 0.0 0.0608
ENSG00000225447 RPS15AP10 150426 eQTL 9.70e-03 -0.178 0.0687 0.0 0.0 0.0608
ENSG00000230896 AL604028.1 99548 eQTL 4.33e-02 -0.157 0.0778 0.0 0.0 0.0608
ENSG00000232022 FAAHP1 -635506 eQTL 1.86e-02 -0.145 0.0615 0.0 0.0 0.0608
ENSG00000281912 LINC01144 492713 eQTL 2.33e-04 0.254 0.0689 0.0011 0.00117 0.0608


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 305460 1.29e-06 1.91e-06 2.62e-07 1.27e-06 2.58e-07 4.43e-07 1.6e-06 4.01e-07 1.39e-06 3.24e-07 1.85e-06 5.79e-07 1.99e-06 3.03e-07 5.06e-07 8.12e-07 7.88e-07 6.58e-07 7.22e-07 6.16e-07 3.39e-07 1.63e-06 8.61e-07 6.54e-07 2.23e-06 4.32e-07 7.06e-07 7.25e-07 1.01e-06 1.23e-06 5.88e-07 4.94e-08 2.29e-07 6.95e-07 4.66e-07 4.49e-07 6.91e-07 8.15e-08 2.21e-07 2.99e-07 9.99e-08 1.5e-06 3.34e-07 1.55e-07 1.84e-07 1.37e-07 1.8e-07 8.87e-08 5.4e-08
ENSG00000086015 MAST2 9636 3.98e-05 3.89e-05 6.97e-06 1.72e-05 6.77e-06 1.7e-05 4.97e-05 6.25e-06 4.13e-05 2.01e-05 5.04e-05 2.18e-05 6.54e-05 1.63e-05 8.05e-06 2.5e-05 1.86e-05 3.03e-05 8.46e-06 8.3e-06 1.97e-05 4.22e-05 3.46e-05 1.12e-05 5.6e-05 1.04e-05 1.75e-05 1.66e-05 3.79e-05 2.57e-05 2.44e-05 1.95e-06 2.68e-06 7.83e-06 1.4e-05 7.56e-06 3.58e-06 3.67e-06 5.92e-06 3.85e-06 1.92e-06 4.6e-05 4.1e-06 4.6e-07 3.11e-06 5.23e-06 4.86e-06 2.48e-06 1.62e-06
ENSG00000117425 PTCH2 953370 2.66e-07 1.11e-07 3.39e-08 1.79e-07 9.02e-08 9.32e-08 1.41e-07 5.49e-08 1.41e-07 4.24e-08 1.59e-07 8.03e-08 1.26e-07 6.21e-08 5.53e-08 7.89e-08 4.94e-08 1.14e-07 5.39e-08 4.03e-08 1.05e-07 1.28e-07 1.3e-07 4.54e-08 1.31e-07 1.15e-07 1.12e-07 8.71e-08 9.88e-08 1.12e-07 9.58e-08 3.89e-08 2.74e-08 8.68e-08 9.27e-08 3.87e-08 5.03e-08 8.91e-08 8.19e-08 3.18e-08 3.66e-08 1.36e-07 5.08e-08 1.08e-08 9.21e-08 1.72e-08 1.34e-07 4.26e-09 4.91e-08
ENSG00000117448 AKR1A1 246080 1.31e-06 2.44e-06 3.14e-07 1.76e-06 3.73e-07 6.02e-07 1.25e-06 4.45e-07 1.72e-06 4.82e-07 1.83e-06 9.11e-07 2.64e-06 4.66e-07 4.72e-07 1.02e-06 9.64e-07 1.16e-06 5.54e-07 7.4e-07 7.72e-07 1.95e-06 1.64e-06 6.22e-07 2.5e-06 7.58e-07 1.03e-06 8.64e-07 1.5e-06 1.5e-06 8.43e-07 2.98e-07 3e-07 5.48e-07 6.17e-07 5.24e-07 6.87e-07 1.32e-07 4.73e-07 2.15e-07 2.71e-07 1.77e-06 4.58e-07 1.66e-07 1.52e-07 3.24e-07 2.29e-07 1.49e-07 9.42e-08
ENSG00000117481 NSUN4 -543554 3.1e-07 4.97e-07 5.35e-08 3.57e-07 1.07e-07 8.4e-08 3.33e-07 7.52e-08 2.01e-07 9.72e-08 3.66e-07 1.52e-07 3.04e-07 9.15e-08 1.26e-07 1.06e-07 6.63e-08 2.66e-07 1.81e-07 7.4e-08 1.23e-07 2.24e-07 2.2e-07 4.81e-08 3.27e-07 1.76e-07 1.29e-07 1.26e-07 1.34e-07 2.39e-07 1.27e-07 4.32e-08 4.74e-08 1.02e-07 5.65e-08 3.94e-08 8.35e-08 8.63e-08 5.95e-08 5.54e-08 4.39e-08 1.55e-07 4.59e-08 1.41e-07 3.29e-08 1.03e-08 1e-07 0.0 4.67e-08
ENSG00000132773 TOE1 456571 5.74e-07 9.07e-07 6.72e-08 4.14e-07 1.13e-07 1.57e-07 5.31e-07 1.4e-07 3.94e-07 1.5e-07 9.07e-07 2.98e-07 6.08e-07 1.48e-07 3.13e-07 2e-07 2.25e-07 3.73e-07 3.26e-07 1.67e-07 1.57e-07 3.87e-07 3.69e-07 1.44e-07 7.72e-07 2.42e-07 2.22e-07 1.88e-07 2.4e-07 6.27e-07 2.19e-07 6.68e-08 5.68e-08 1.57e-07 2.43e-07 6.94e-08 2.59e-07 8.25e-08 5.28e-08 8.36e-09 5.54e-08 3.26e-07 6.58e-08 1.81e-07 6.21e-08 1.22e-08 9.23e-08 3.35e-09 4.82e-08
ENSG00000132780 NASP 212777 1.6e-06 3.13e-06 2.91e-07 1.86e-06 4.27e-07 6.4e-07 1.52e-06 6.41e-07 1.63e-06 6.65e-07 2.49e-06 1.32e-06 2.94e-06 9.45e-07 8.13e-07 1.15e-06 1.07e-06 1.68e-06 8.58e-07 1.21e-06 7.69e-07 2.44e-06 2.16e-06 9.74e-07 3.36e-06 1.11e-06 1e-06 1.17e-06 1.79e-06 1.8e-06 9.62e-07 2.83e-07 3.75e-07 8.88e-07 9.17e-07 6.23e-07 8.29e-07 1.36e-07 4.82e-07 3.53e-07 2.84e-07 2.62e-06 5.97e-07 1.64e-07 3.1e-07 3.21e-07 2.28e-07 2.71e-07 1.14e-07
ENSG00000159588 CCDC17 172566 2.61e-06 4.65e-06 2.73e-07 2.79e-06 4.38e-07 8.14e-07 2.48e-06 1.03e-06 2.37e-06 7.73e-07 3.49e-06 1.44e-06 3.71e-06 1.43e-06 8.94e-07 1.66e-06 1.09e-06 2.17e-06 1.61e-06 8.98e-07 8.12e-07 3.23e-06 3.37e-06 1.24e-06 4.36e-06 1.06e-06 1.26e-06 1.79e-06 1.95e-06 2.79e-06 2.02e-06 4.52e-07 5.66e-07 1.27e-06 1.43e-06 9.09e-07 9.08e-07 2.95e-07 1.11e-06 3.28e-07 2.88e-07 3.4e-06 3.97e-07 1.58e-07 3.97e-07 3.43e-07 4.63e-07 2e-07 2.46e-07
ENSG00000159592 GPBP1L1 108510 4.46e-06 7.1e-06 6.25e-07 4.37e-06 1.64e-06 1.6e-06 7.23e-06 1.29e-06 4.55e-06 2.5e-06 7.42e-06 2.83e-06 8.28e-06 1.98e-06 1.02e-06 3.85e-06 1.97e-06 3.74e-06 1.43e-06 2.41e-06 2.91e-06 4.9e-06 4.79e-06 1.87e-06 9.01e-06 2.13e-06 2.35e-06 1.69e-06 4.73e-06 5.37e-06 2.59e-06 7.89e-07 4.86e-07 2.16e-06 2.07e-06 1.84e-06 1.24e-06 4.2e-07 9.5e-07 8.7e-07 6.39e-07 7.41e-06 6.72e-07 1.88e-07 3.74e-07 1.25e-06 1.02e-06 7.1e-07 3.75e-07
ENSG00000222009 BTBD19 988141 2.66e-07 1.1e-07 3.44e-08 1.78e-07 9.65e-08 9.36e-08 1.41e-07 5.49e-08 1.42e-07 4.24e-08 1.6e-07 8.02e-08 1.27e-07 6.21e-08 5.55e-08 8.01e-08 4.94e-08 1.14e-07 5.36e-08 3.88e-08 1.05e-07 1.3e-07 1.3e-07 4.53e-08 1.31e-07 1.13e-07 1.1e-07 8.71e-08 9.97e-08 1.1e-07 9.75e-08 3.95e-08 2.74e-08 8.21e-08 9.41e-08 3.9e-08 5.01e-08 9.06e-08 8.3e-08 3.01e-08 3.77e-08 1.37e-07 4.52e-08 1.43e-08 9.88e-08 1.72e-08 1.35e-07 4.33e-09 4.91e-08
ENSG00000230896 AL604028.1 99548 4.46e-06 8.15e-06 6.31e-07 4.85e-06 1.63e-06 1.55e-06 8.17e-06 1.44e-06 5.22e-06 2.82e-06 8.3e-06 3.52e-06 9.94e-06 2.5e-06 1.03e-06 3.91e-06 2.36e-06 3.78e-06 1.56e-06 2.65e-06 3.11e-06 5.62e-06 5.12e-06 2.02e-06 9.55e-06 2.4e-06 2.51e-06 2.11e-06 5.92e-06 6.66e-06 3.18e-06 9.81e-07 6.32e-07 2.34e-06 2.12e-06 2.04e-06 1.39e-06 5.11e-07 9.82e-07 1.03e-06 7.2e-07 8.25e-06 8.16e-07 1.95e-07 5.95e-07 1.06e-06 1.14e-06 6.46e-07 4.68e-07
ENSG00000234329 \N 144797 3.63e-06 4.93e-06 5.8e-07 3.6e-06 7.47e-07 7.64e-07 3.07e-06 9.6e-07 3.98e-06 1.27e-06 4.9e-06 2.74e-06 6.46e-06 1.9e-06 1.38e-06 2.01e-06 1.55e-06 2.74e-06 1.36e-06 1.21e-06 1.41e-06 3.9e-06 3.51e-06 1.81e-06 5.12e-06 1.35e-06 1.73e-06 1.67e-06 3.79e-06 3.95e-06 2.04e-06 5.58e-07 6.49e-07 1.73e-06 2.01e-06 9.03e-07 9.99e-07 3.81e-07 1.34e-06 4.26e-07 2.11e-07 4.71e-06 3.47e-07 1.52e-07 3.22e-07 3.41e-07 8.95e-07 3.18e-07 1.98e-07
ENSG00000281912 LINC01144 492713 4.21e-07 6.81e-07 6.41e-08 4.08e-07 1.05e-07 1.25e-07 4.42e-07 9.78e-08 2.75e-07 1.21e-07 6.28e-07 2.04e-07 4.54e-07 1.1e-07 2.26e-07 1.49e-07 1.18e-07 3.04e-07 2.57e-07 1.31e-07 1.35e-07 2.86e-07 3.02e-07 1.13e-07 5.15e-07 2.13e-07 1.74e-07 1.54e-07 1.6e-07 4.3e-07 1.78e-07 4.78e-08 5.41e-08 1.16e-07 1.29e-07 5.32e-08 1.83e-07 9.03e-08 4.72e-08 2.83e-08 5e-08 2.41e-07 6.44e-08 2.07e-07 3.71e-08 1.32e-08 7.61e-08 2.8e-09 4.54e-08