Genes within 1Mb (chr1:45794136:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 7149 eQTL 7.98e-19 0.379 0.0419 0.0 0.0 0.05
ENSG00000117425 PTCH2 950883 eQTL 1.06e-02 0.134 0.0523 0.00107 0.0 0.05
ENSG00000117448 AKR1A1 243593 eQTL 2.31e-02 -0.0567 0.0249 0.0 0.0 0.05
ENSG00000117461 PIK3R3 -338900 eQTL 3.13e-02 -0.0963 0.0447 0.0 0.0 0.05
ENSG00000126088 UROD 783186 pQTL 5.41e-04 0.115 0.0332 0.0 0.0 0.048
ENSG00000126088 UROD 783186 eQTL 8.25e-03 0.122 0.0459 0.0 0.0 0.05
ENSG00000132773 TOE1 454084 eQTL 2.45e-02 -0.066 0.0293 0.0 0.0 0.05
ENSG00000132780 NASP 210290 eQTL 6.10e-11 -0.231 0.035 0.00265 0.00264 0.05
ENSG00000159588 CCDC17 170079 eQTL 3.00e-22 -0.298 0.0299 0.0 0.0 0.05
ENSG00000159592 GPBP1L1 106023 eQTL 5.83e-03 0.0653 0.0236 0.0 0.0 0.05
ENSG00000162415 ZSWIM5 487927 eQTL 2.02e-02 -0.108 0.0464 0.0 0.0 0.05
ENSG00000197429 IPP 43486 eQTL 3.46e-02 -0.095 0.0449 0.0 0.0 0.05
ENSG00000222009 BTBD19 985654 eQTL 9.42e-05 -0.127 0.0324 0.0 0.0 0.05
ENSG00000232022 FAAHP1 -637993 eQTL 5.09e-03 -0.185 0.066 0.00112 0.0 0.05
ENSG00000234329 AL604028.2 142310 eQTL 6.71e-03 -0.149 0.0548 0.0 0.0 0.05
ENSG00000281912 LINC01144 490226 eQTL 1.29e-03 0.239 0.0742 0.0 0.0 0.05


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 7149 8.53e-05 6.95e-05 7.1e-06 2.48e-05 7.93e-06 2.15e-05 6.56e-05 6.24e-06 5.54e-05 2.67e-05 6.22e-05 2.78e-05 7.69e-05 2.41e-05 1.21e-05 3.42e-05 2.66e-05 4.47e-05 1.07e-05 9.02e-06 2.44e-05 6.44e-05 4.04e-05 1.44e-05 6.61e-05 1.37e-05 2.36e-05 2.26e-05 4.39e-05 3.25e-05 3.18e-05 2.93e-06 4.99e-06 9.73e-06 1.54e-05 6.81e-06 5.36e-06 4.06e-06 7.72e-06 4e-06 1.85e-06 6.17e-05 4.92e-06 5.28e-07 3.62e-06 5.22e-06 5.97e-06 1.93e-06 1.5e-06
ENSG00000117425 PTCH2 950883 1.26e-06 7.85e-06 2.72e-07 1.72e-06 9.61e-08 4.92e-07 1.26e-06 7.65e-08 1.71e-06 3.95e-07 1.86e-06 1.25e-06 2.73e-06 2.34e-06 9.27e-07 9.85e-07 1.11e-06 6.21e-07 3.79e-07 1.39e-07 3.35e-07 1.92e-06 7.96e-07 2.39e-07 1.97e-06 4.28e-07 5.76e-07 5.44e-07 6.62e-07 8.4e-07 7.54e-07 3.08e-08 3.8e-08 3.78e-07 8.29e-07 3.5e-08 9.77e-08 7.53e-08 1.41e-07 2.83e-08 5.44e-08 1.55e-06 2.28e-08 1.22e-08 9.79e-08 7.16e-08 1.9e-07 2.89e-09 4.91e-08
ENSG00000117448 AKR1A1 243593 1.08e-05 8.91e-05 9.81e-07 9.47e-06 1.5e-06 3.83e-06 1.11e-05 1.03e-06 1.02e-05 3.25e-06 1.6e-05 7.7e-06 1.53e-05 1.2e-05 3.49e-06 6.74e-06 8.19e-06 7.91e-06 1.43e-06 1.2e-06 4.49e-06 9.61e-06 6.85e-06 1.68e-06 1.25e-05 4.03e-06 3.64e-06 1.8e-06 6.54e-06 5.18e-06 8.34e-06 2.7e-07 6.43e-07 2.63e-06 6.9e-06 9.34e-07 7.42e-07 4.24e-07 8.53e-07 4.28e-07 3.55e-07 1.2e-05 4.01e-07 9e-08 4.06e-07 3.75e-07 1.06e-06 2.19e-07 2.22e-07
ENSG00000126088 UROD 783186 1.5e-06 1.13e-05 5.55e-07 1.95e-06 2.71e-07 6.45e-07 1.41e-06 1.45e-07 1.95e-06 5.86e-07 2.57e-06 1.39e-06 3.49e-06 2.79e-06 1.43e-06 1.15e-06 1.56e-06 1.13e-06 7.25e-07 3.11e-07 7.54e-07 2.25e-06 1.05e-06 5.36e-07 2.36e-06 8.9e-07 9.05e-07 7.51e-07 1.25e-06 1.11e-06 1.81e-06 3.84e-08 6.08e-08 6.86e-07 1.67e-06 6.33e-08 1.11e-07 1.59e-07 3.73e-07 1.79e-08 5.96e-08 2.23e-06 5.03e-08 2.62e-08 2.03e-07 1.19e-07 2.42e-07 3.05e-08 5.16e-08
ENSG00000132780 NASP 210290 1.24e-05 0.000104 1.26e-06 1.03e-05 1.82e-06 4e-06 1.28e-05 1.07e-06 1.14e-05 4.01e-06 1.82e-05 9.22e-06 1.8e-05 1.33e-05 3.66e-06 7.31e-06 9.14e-06 9.67e-06 1.65e-06 1.4e-06 4.98e-06 1.06e-05 7.56e-06 1.86e-06 1.39e-05 4.39e-06 4.35e-06 1.9e-06 7.13e-06 6.6e-06 1.06e-05 2.31e-07 5.91e-07 2.77e-06 7.46e-06 9.36e-07 7.88e-07 4.4e-07 9.49e-07 5e-07 2.88e-07 1.3e-05 6.3e-07 9e-08 6.11e-07 4.3e-07 1.35e-06 2.25e-07 2.06e-07
ENSG00000159588 CCDC17 170079 1.46e-05 0.000119 1.23e-06 1.17e-05 2.1e-06 4.19e-06 1.73e-05 1.15e-06 1.32e-05 4.28e-06 2.04e-05 1.2e-05 2.01e-05 1.49e-05 4.19e-06 9e-06 1.06e-05 1.11e-05 2.19e-06 1.71e-06 5.94e-06 1.22e-05 9.05e-06 2.01e-06 1.72e-05 4.73e-06 4.87e-06 2.43e-06 8.26e-06 7.69e-06 1.18e-05 2.6e-07 5.88e-07 2.94e-06 8.27e-06 9.44e-07 7.36e-07 4.36e-07 1.29e-06 6.24e-07 1.82e-07 1.45e-05 7.84e-07 1.06e-07 6.22e-07 6.92e-07 1.74e-06 2.21e-07 1.58e-07
ENSG00000159592 GPBP1L1 106023 2.55e-05 0.00014 1.3e-06 1.32e-05 2.42e-06 5.65e-06 2.37e-05 1.54e-06 1.66e-05 4.99e-06 2.39e-05 1.79e-05 2.52e-05 1.7e-05 5.1e-06 1.02e-05 1.29e-05 1.39e-05 2.63e-06 2.69e-06 6.73e-06 1.91e-05 1.24e-05 3.36e-06 2.14e-05 4.5e-06 6.28e-06 3.44e-06 1.24e-05 7.94e-06 1.36e-05 4.17e-07 5.51e-07 3.59e-06 9.85e-06 1.18e-06 9.22e-07 8.19e-07 1.63e-06 8.89e-07 4.16e-07 1.8e-05 1.26e-06 1.3e-07 7.82e-07 1.14e-06 2.1e-06 2.11e-07 3.21e-07
ENSG00000173660 \N -509562 4.26e-06 3.01e-05 8.13e-07 4.01e-06 4.86e-07 1.19e-06 2.77e-06 3.9e-07 5.17e-06 1.18e-06 6.52e-06 3.37e-06 7.01e-06 4.25e-06 1.05e-06 2.98e-06 2.84e-06 2.7e-06 7.31e-07 4.77e-07 1.39e-06 4.47e-06 3.2e-06 9.76e-07 4.53e-06 1.39e-06 1.28e-06 1.54e-06 1.91e-06 1.64e-06 2.8e-06 7.03e-08 1.79e-07 1.22e-06 3.3e-06 3.92e-07 4.79e-07 3.86e-07 9.27e-07 2.64e-07 9.91e-08 4.74e-06 2.46e-07 6.53e-08 3.17e-07 3.47e-07 8.3e-07 2.77e-08 9.13e-08
ENSG00000222009 BTBD19 985654 1.25e-06 6.84e-06 2.31e-07 1.57e-06 1.05e-07 4.82e-07 1.13e-06 7.56e-08 1.73e-06 3.66e-07 1.89e-06 1.25e-06 2.51e-06 2.04e-06 8.86e-07 9.27e-07 1.15e-06 5.47e-07 3.51e-07 1.17e-07 2.89e-07 1.69e-06 7.08e-07 1.94e-07 1.98e-06 3.75e-07 5.24e-07 4.98e-07 5.7e-07 7.42e-07 8.46e-07 3.68e-08 3.65e-08 3.28e-07 6.8e-07 3.24e-08 7.97e-08 7.62e-08 1.1e-07 2.68e-08 5e-08 1.43e-06 3.09e-08 5.93e-09 8.59e-08 6.01e-08 1.76e-07 0.0 4.82e-08
ENSG00000234329 AL604028.2 142310 1.65e-05 0.000127 1.21e-06 1.24e-05 2.17e-06 4.75e-06 2.01e-05 1.19e-06 1.48e-05 4.75e-06 2.15e-05 1.47e-05 2.24e-05 1.57e-05 4.38e-06 9.28e-06 1.17e-05 1.2e-05 2.34e-06 2.27e-06 6.52e-06 1.37e-05 1.03e-05 2.76e-06 1.93e-05 4.58e-06 5.04e-06 2.96e-06 9.94e-06 7.69e-06 1.28e-05 2.87e-07 8.14e-07 3.14e-06 8.76e-06 8.84e-07 8.57e-07 5.14e-07 1.32e-06 7.55e-07 2.25e-07 1.57e-05 9.29e-07 1.06e-07 7.57e-07 9.83e-07 1.8e-06 2.02e-07 1.63e-07
ENSG00000281912 LINC01144 490226 4.74e-06 3.25e-05 7.11e-07 4.15e-06 4.76e-07 1.33e-06 2.96e-06 4.04e-07 5.13e-06 1.28e-06 6.99e-06 3.37e-06 7.53e-06 4.54e-06 1.06e-06 3.32e-06 3e-06 2.94e-06 9.07e-07 4.63e-07 1.39e-06 4.77e-06 3.38e-06 1.02e-06 4.68e-06 1.67e-06 1.39e-06 1.74e-06 2.2e-06 1.66e-06 2.59e-06 6.2e-08 2.29e-07 1.18e-06 3.56e-06 4.15e-07 5.17e-07 4.57e-07 9.94e-07 3.02e-07 1.04e-07 4.71e-06 3.34e-07 7.3e-08 3.65e-07 2.95e-07 7.24e-07 3.8e-08 8.37e-08