Genes within 1Mb (chr1:45773171:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 282008 eQTL 1.41e-07 0.123 0.0231 0.0 0.0 0.11
ENSG00000079277 MKNK1 -843672 eQTL 2.45e-03 0.0593 0.0195 0.0 0.0 0.11
ENSG00000085998 POMGNT1 -447134 eQTL 4.72e-02 0.0328 0.0165 0.0 0.0 0.11
ENSG00000086015 MAST2 -13816 eQTL 4.86e-05 -0.125 0.0307 0.0 0.0 0.11
ENSG00000117450 PRDX1 250124 eQTL 4.94e-05 -0.0733 0.018 0.0 0.0 0.11
ENSG00000117461 PIK3R3 -359865 eQTL 3.74e-05 -0.13 0.0314 0.0 0.0 0.11
ENSG00000126088 UROD 762221 pQTL 1.20e-03 -0.0752 0.0232 0.0 0.0 0.105
ENSG00000142961 MOB3C -843720 eQTL 1.64e-02 0.071 0.0295 0.0 0.0 0.11
ENSG00000159588 CCDC17 149114 eQTL 1.95e-02 -0.052 0.0222 0.0 0.0 0.11
ENSG00000159596 TMEM69 84990 eQTL 2.73e-16 -0.277 0.0333 0.0 0.0 0.11
ENSG00000173846 PLK3 972794 eQTL 1.16e-02 -0.0451 0.0178 0.0 0.0 0.11
ENSG00000225447 RPS15AP10 126974 eQTL 4.24e-06 0.24 0.0519 0.0 0.0 0.11
ENSG00000234093 RPS15AP11 992456 eQTL 4.87e-02 -0.108 0.0547 0.0 0.0 0.11
ENSG00000234329 AL604028.2 121345 eQTL 2.92e-15 0.303 0.0377 0.0 0.0 0.11


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 282008 4.41e-06 2.55e-06 2.32e-07 1.8e-06 4.69e-07 1.35e-06 2.47e-06 3.83e-07 1.76e-06 7.2e-07 2.02e-06 1.32e-06 4.27e-06 1.39e-06 9.01e-07 1.84e-06 9.97e-07 1.92e-06 7.85e-07 1.36e-06 1.57e-06 3.17e-06 2.28e-06 9.54e-07 3.5e-06 1.22e-06 1.38e-06 1.67e-06 1.99e-06 2.49e-06 1.08e-06 4.17e-07 3.9e-07 1.35e-06 1.07e-06 8.73e-07 7.48e-07 2.74e-07 1.24e-06 3.64e-07 1.52e-07 3.26e-06 6.3e-07 1.89e-07 2.97e-07 3.5e-07 2.79e-07 5.95e-08 2.03e-07
ENSG00000079277 MKNK1 -843672 3.53e-07 1.42e-07 4.91e-08 2.43e-07 9.25e-08 1.25e-07 2.86e-07 5.43e-08 1.5e-07 5.67e-08 1.63e-07 8.68e-08 2.38e-07 8e-08 5.94e-08 7.89e-08 3.93e-08 1.56e-07 7.16e-08 5.2e-08 1.27e-07 1.56e-07 1.64e-07 2.93e-08 1.65e-07 1.22e-07 1.19e-07 1.06e-07 1.26e-07 1.1e-07 1.07e-07 3.54e-08 3.43e-08 1.02e-07 3.12e-08 3.28e-08 4.54e-08 9.26e-08 6.29e-08 7.65e-08 4.69e-08 1.52e-07 4.76e-08 7.32e-09 3.42e-08 9.65e-09 1.21e-07 4.04e-09 4.73e-08
ENSG00000086015 MAST2 -13816 7.19e-05 2.48e-05 3.89e-06 1.34e-05 4.21e-06 1.78e-05 3.63e-05 3.71e-06 2.22e-05 1.27e-05 2.68e-05 1.07e-05 3.83e-05 1.03e-05 6.59e-06 1.54e-05 1.51e-05 2.99e-05 6.56e-06 5.26e-06 1.34e-05 2.64e-05 2.89e-05 7.87e-06 3.79e-05 6.8e-06 1.06e-05 9.9e-06 2.34e-05 2.35e-05 1.3e-05 1.45e-06 1.96e-06 5.98e-06 9.3e-06 4.16e-06 2.02e-06 2.61e-06 3.71e-06 2.73e-06 1.67e-06 3.49e-05 4.86e-06 1.59e-07 2.49e-06 2.71e-06 3.59e-06 1.14e-06 1.02e-06
ENSG00000117450 PRDX1 250124 4.7e-06 3.13e-06 4.42e-07 2.73e-06 7.65e-07 1.62e-06 2.96e-06 6.05e-07 2.27e-06 1.03e-06 2.57e-06 1.31e-06 6.4e-06 1.84e-06 9.69e-07 2.37e-06 1.34e-06 2.14e-06 1.49e-06 1.07e-06 2.51e-06 3.9e-06 3.4e-06 1.42e-06 4.32e-06 1.09e-06 1.84e-06 1.72e-06 3.12e-06 3.58e-06 1.89e-06 5.93e-07 5.36e-07 1.83e-06 1.69e-06 9.75e-07 9.08e-07 3.5e-07 1.1e-06 3.98e-07 2.38e-07 3.95e-06 9.02e-07 1.85e-07 3.63e-07 3.94e-07 4.12e-07 2.23e-07 3.01e-07
ENSG00000159596 TMEM69 84990 3.86e-05 1.4e-05 1.9e-06 1.03e-05 2.4e-06 8.94e-06 2.07e-05 2.39e-06 1.29e-05 7.19e-06 1.64e-05 6.53e-06 2.36e-05 6.43e-06 4.47e-06 9.57e-06 8.11e-06 1.52e-05 3.56e-06 3.27e-06 7.43e-06 1.32e-05 1.51e-05 4.37e-06 2.75e-05 4.65e-06 7.92e-06 6.17e-06 1.44e-05 1.3e-05 7.65e-06 1.04e-06 1.23e-06 3.91e-06 6.68e-06 2.86e-06 1.87e-06 1.9e-06 2.05e-06 1.72e-06 9.58e-07 2e-05 3.38e-06 1.46e-07 1.41e-06 1.76e-06 2.03e-06 7.13e-07 4.64e-07
ENSG00000173846 PLK3 972794 2.77e-07 1.3e-07 3.71e-08 2.09e-07 8.83e-08 8.63e-08 1.9e-07 5.37e-08 1.45e-07 4.74e-08 1.62e-07 7.78e-08 1.69e-07 7.13e-08 6.04e-08 7.53e-08 3.88e-08 1.26e-07 6.07e-08 4.23e-08 1.25e-07 1.24e-07 1.44e-07 4.05e-08 1.37e-07 1.14e-07 1.07e-07 9.61e-08 1.09e-07 1.05e-07 9.7e-08 3.64e-08 3.56e-08 8.89e-08 6.67e-08 3.94e-08 5.65e-08 9.68e-08 6.58e-08 4.41e-08 3.89e-08 1.33e-07 5.22e-08 1.44e-08 5.7e-08 1.65e-08 1.23e-07 4.26e-09 4.91e-08
ENSG00000234329 AL604028.2 121345 1.86e-05 1.01e-05 1.34e-06 7.82e-06 2.38e-06 6.2e-06 1.22e-05 1.92e-06 9.51e-06 5.57e-06 1.2e-05 5.23e-06 1.6e-05 4.21e-06 3.17e-06 6.97e-06 4.94e-06 9.51e-06 2.7e-06 2.83e-06 6.26e-06 1.02e-05 9.26e-06 3.28e-06 1.93e-05 3.52e-06 6.33e-06 4.62e-06 1.02e-05 9.11e-06 4.92e-06 1.11e-06 1.02e-06 3.36e-06 5.01e-06 2.09e-06 1.55e-06 5.24e-07 2.01e-06 1.11e-06 9.9e-07 1.39e-05 2.68e-06 1.64e-07 8.04e-07 1.64e-06 1.4e-06 6.87e-07 5.98e-07