Genes within 1Mb (chr1:45756275:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -30712 eQTL 1.02e-19 0.381 0.041 0.0072 0.00738 0.052
ENSG00000117425 PTCH2 913022 eQTL 1.07e-02 0.131 0.0513 0.00105 0.0 0.052
ENSG00000117448 AKR1A1 205732 eQTL 1.46e-02 -0.0598 0.0244 0.0 0.0 0.052
ENSG00000117461 PIK3R3 -376761 eQTL 2.86e-02 -0.096 0.0438 0.0 0.0 0.052
ENSG00000126088 UROD 745325 pQTL 1.91e-04 0.121 0.0324 0.0 0.0 0.0509
ENSG00000126088 UROD 745325 eQTL 5.27e-03 0.126 0.045 0.0 0.0 0.052
ENSG00000132773 TOE1 416223 eQTL 1.79e-02 -0.0681 0.0287 0.0 0.0 0.052
ENSG00000132780 NASP 172429 eQTL 2.70e-11 -0.231 0.0343 0.00535 0.00565 0.052
ENSG00000159588 CCDC17 132218 eQTL 9.82e-25 -0.308 0.0292 0.0 0.0 0.052
ENSG00000159592 GPBP1L1 68162 eQTL 5.46e-03 0.0645 0.0232 0.0 0.0 0.052
ENSG00000162415 ZSWIM5 450066 eQTL 3.74e-02 -0.0949 0.0455 0.0 0.0 0.052
ENSG00000197429 IPP 5625 eQTL 1.04e-02 -0.113 0.044 0.0 0.0 0.052
ENSG00000222009 BTBD19 947793 eQTL 1.20e-04 -0.123 0.0317 0.0 0.0 0.052
ENSG00000225447 RPS15AP10 110078 eQTL 4.21e-02 -0.148 0.0725 0.0 0.0 0.052
ENSG00000232022 FAAHP1 -675854 eQTL 4.40e-03 -0.185 0.0647 0.00131 0.0 0.052
ENSG00000234329 AL604028.2 104449 eQTL 1.46e-03 -0.171 0.0537 0.0 0.0 0.052
ENSG00000281912 LINC01144 452365 eQTL 5.30e-04 0.253 0.0727 0.0 0.0 0.052


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -30712 1.36e-05 1.31e-05 2.47e-06 8.32e-06 2.79e-06 6.44e-06 1.93e-05 2.46e-06 1.32e-05 6.72e-06 1.74e-05 6.83e-06 2.39e-05 5.19e-06 4.41e-06 9.01e-06 7.73e-06 1.22e-05 4.25e-06 4.17e-06 7.26e-06 1.3e-05 1.39e-05 5.03e-06 2.35e-05 5.01e-06 7.6e-06 6.04e-06 1.59e-05 1.52e-05 8.68e-06 1.12e-06 1.51e-06 4.4e-06 6.01e-06 3.76e-06 1.85e-06 2.41e-06 3.01e-06 2.01e-06 1.69e-06 1.73e-05 2.22e-06 3.24e-07 1.88e-06 2.36e-06 2.6e-06 1.18e-06 1.01e-06
ENSG00000117425 PTCH2 913022 2.74e-07 1.3e-07 4.91e-08 1.82e-07 9.24e-08 9.8e-08 1.53e-07 5.4e-08 1.45e-07 4.94e-08 1.54e-07 9e-08 1.45e-07 6.76e-08 6.04e-08 7.36e-08 3.93e-08 1.27e-07 5.75e-08 4.04e-08 1.13e-07 1.27e-07 1.44e-07 3.23e-08 1.46e-07 1.14e-07 1.07e-07 9.61e-08 1.16e-07 1.02e-07 9.92e-08 3.87e-08 3.56e-08 8.44e-08 7.51e-08 3.6e-08 5.02e-08 9.23e-08 6.56e-08 3.87e-08 5.13e-08 1.36e-07 5.24e-08 1.91e-08 4.7e-08 1.83e-08 1.22e-07 3.86e-09 4.9e-08
ENSG00000117448 AKR1A1 205732 1.81e-06 1.95e-06 2.74e-07 1.18e-06 4.83e-07 6.48e-07 1.2e-06 3.93e-07 1.72e-06 7.25e-07 1.84e-06 1.27e-06 2.64e-06 5.23e-07 3.35e-07 1.1e-06 1.12e-06 1.3e-06 5.55e-07 6.02e-07 6.64e-07 1.96e-06 1.64e-06 8.48e-07 2.42e-06 9.3e-07 1.06e-06 1.05e-06 1.66e-06 1.4e-06 7.6e-07 2.78e-07 3.55e-07 6.25e-07 6.88e-07 6.24e-07 7.36e-07 3.58e-07 5.39e-07 2.22e-07 2.87e-07 2.35e-06 3.49e-07 1.31e-07 3.6e-07 2.88e-07 3.7e-07 1.43e-07 2.91e-07
ENSG00000126088 UROD 745325 2.95e-07 1.33e-07 6.04e-08 2.01e-07 1.03e-07 8.45e-08 1.81e-07 5.75e-08 1.5e-07 6.75e-08 1.59e-07 1.19e-07 1.71e-07 7.64e-08 5.94e-08 7.89e-08 4.31e-08 1.56e-07 6.92e-08 4.8e-08 1.25e-07 1.31e-07 1.58e-07 2.83e-08 1.68e-07 1.23e-07 1.17e-07 1.04e-07 1.31e-07 1e-07 1.07e-07 2.96e-08 3.43e-08 8.89e-08 3.52e-08 2.99e-08 5.59e-08 8.61e-08 6.71e-08 3.67e-08 5.54e-08 1.46e-07 5.08e-08 1.55e-08 2.82e-08 1.77e-08 1e-07 1.88e-09 4.8e-08
ENSG00000132780 NASP 172429 2.7e-06 2.55e-06 3.32e-07 1.7e-06 4.79e-07 8.14e-07 1.83e-06 6.41e-07 1.8e-06 8.46e-07 2.39e-06 1.28e-06 3.49e-06 1.24e-06 8.54e-07 1.52e-06 1.06e-06 2.2e-06 7.93e-07 1.13e-06 9.86e-07 2.77e-06 2.22e-06 1.07e-06 3.36e-06 1.33e-06 1.26e-06 1.42e-06 2.07e-06 1.81e-06 1.49e-06 2.49e-07 5.85e-07 1.26e-06 9.17e-07 8.73e-07 7.68e-07 4.57e-07 9.49e-07 3.33e-07 1.51e-07 3.35e-06 4.81e-07 1.99e-07 2.73e-07 3.08e-07 6.93e-07 2.31e-07 1.89e-07
ENSG00000159588 CCDC17 132218 4.26e-06 3.99e-06 6.89e-07 1.9e-06 1.12e-06 9.66e-07 2.69e-06 9.98e-07 3.03e-06 1.6e-06 3.71e-06 2.48e-06 5.67e-06 1.37e-06 1.2e-06 2.34e-06 1.75e-06 2.4e-06 1.45e-06 9.54e-07 1.99e-06 3.73e-06 3.45e-06 1.87e-06 4.69e-06 1.24e-06 1.88e-06 1.49e-06 4.1e-06 3.1e-06 2.02e-06 4.71e-07 7.33e-07 1.82e-06 1.87e-06 8.84e-07 9.08e-07 4.67e-07 1.34e-06 3.64e-07 4.42e-07 4.38e-06 4.77e-07 1.6e-07 3.58e-07 3.52e-07 6.64e-07 2.08e-07 3.35e-07
ENSG00000159592 GPBP1L1 68162 7.08e-06 7.92e-06 1.04e-06 3.85e-06 2.27e-06 3.11e-06 9.71e-06 1.52e-06 5.68e-06 4.14e-06 8.8e-06 3.89e-06 1.11e-05 3.34e-06 1.69e-06 5.43e-06 3.71e-06 4.73e-06 2.3e-06 2.52e-06 3.72e-06 7.72e-06 6.55e-06 2.82e-06 1.03e-05 2.77e-06 4.04e-06 2.51e-06 7.52e-06 7.58e-06 3.88e-06 5.91e-07 9.22e-07 2.83e-06 2.54e-06 2.09e-06 1.39e-06 1.32e-06 1.42e-06 9.06e-07 1.02e-06 8.25e-06 9.01e-07 1.5e-07 6.84e-07 1.06e-06 1.06e-06 7.01e-07 4.77e-07
ENSG00000173660 \N -547423 4.89e-07 2.4e-07 7.92e-08 2.49e-07 1.05e-07 1.19e-07 3.33e-07 7.52e-08 2.26e-07 1.37e-07 2.68e-07 1.96e-07 3.6e-07 8.42e-08 9.12e-08 1.26e-07 8.42e-08 2.83e-07 8.68e-08 8.52e-08 1.33e-07 2.24e-07 2.04e-07 4.91e-08 3.14e-07 1.86e-07 1.72e-07 1.54e-07 1.76e-07 1.85e-07 1.59e-07 4.58e-08 4.97e-08 9.9e-08 9.25e-08 4.68e-08 5.26e-08 7.1e-08 5.59e-08 7.92e-08 4.07e-08 2.5e-07 3.4e-08 1.07e-08 6.59e-08 1.01e-08 9.12e-08 0.0 4.61e-08
ENSG00000222009 BTBD19 947793 2.74e-07 1.25e-07 4.69e-08 1.84e-07 9.25e-08 1e-07 1.49e-07 5.37e-08 1.45e-07 4.94e-08 1.57e-07 8.68e-08 1.41e-07 6.56e-08 6.02e-08 7.53e-08 3.87e-08 1.27e-07 5.82e-08 4e-08 1.08e-07 1.28e-07 1.39e-07 3.49e-08 1.4e-07 1.14e-07 1.07e-07 9.65e-08 1.12e-07 1.07e-07 9.7e-08 4.09e-08 3.35e-08 8.55e-08 8.21e-08 3.95e-08 5.01e-08 9.22e-08 6.78e-08 3.98e-08 5.14e-08 1.33e-07 5.08e-08 3.23e-08 4.92e-08 1.99e-08 1.19e-07 3.89e-09 4.94e-08
ENSG00000234329 AL604028.2 104449 4.64e-06 4.89e-06 8.35e-07 2.73e-06 1.61e-06 1.7e-06 5.01e-06 1.04e-06 5.16e-06 2.47e-06 5.33e-06 3.49e-06 7.06e-06 2.31e-06 1.31e-06 3.81e-06 1.78e-06 3.71e-06 1.5e-06 1.14e-06 3.12e-06 4.95e-06 4.59e-06 1.49e-06 6.54e-06 1.95e-06 2.42e-06 1.85e-06 4.46e-06 4.25e-06 2.7e-06 5.25e-07 5.23e-07 1.62e-06 2.19e-06 1.07e-06 9.56e-07 4.24e-07 8.69e-07 4.23e-07 7.14e-07 5.55e-06 4.02e-07 1.63e-07 7.28e-07 7.78e-07 1.06e-06 4.28e-07 4.23e-07
ENSG00000281912 LINC01144 452365 8.21e-07 4.78e-07 9.89e-08 3.58e-07 9.26e-08 1.71e-07 5.01e-07 1.09e-07 3.66e-07 2.14e-07 5.58e-07 3.5e-07 6.08e-07 1.1e-07 1.78e-07 2.14e-07 2.25e-07 3.79e-07 1.7e-07 1.15e-07 1.89e-07 3.34e-07 3.04e-07 1.29e-07 6.18e-07 2.4e-07 2.58e-07 2.19e-07 3.58e-07 4.1e-07 2.55e-07 8.48e-08 5.48e-08 1.19e-07 2.61e-07 6.73e-08 7.97e-08 6.78e-08 5.54e-08 6.05e-08 7.96e-08 4.04e-07 2.16e-08 2.07e-08 1.14e-07 1.78e-08 8.01e-08 2.99e-09 5.05e-08