Genes within 1Mb (chr1:45731542:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -55445 eQTL 5.55e-20 0.384 0.041 0.0102 0.0108 0.0515
ENSG00000117425 PTCH2 888289 eQTL 9.85e-03 0.133 0.0513 0.00108 0.0 0.0515
ENSG00000117448 AKR1A1 180999 eQTL 1.76e-02 -0.0582 0.0245 0.0 0.0 0.0515
ENSG00000117461 PIK3R3 -401494 eQTL 3.42e-02 -0.0931 0.0439 0.0 0.0 0.0515
ENSG00000126088 UROD 720592 pQTL 1.57e-04 0.123 0.0324 0.0 0.0 0.0506
ENSG00000126088 UROD 720592 eQTL 6.77e-03 0.122 0.0451 0.0 0.0 0.0515
ENSG00000132773 TOE1 391490 eQTL 1.86e-02 -0.0678 0.0288 0.0 0.0 0.0515
ENSG00000132780 NASP 147696 eQTL 2.19e-11 -0.232 0.0343 0.00673 0.00696 0.0515
ENSG00000159588 CCDC17 107485 eQTL 8.47e-25 -0.309 0.0292 0.0 0.0 0.0515
ENSG00000159592 GPBP1L1 43429 eQTL 5.28e-03 0.0648 0.0232 0.0 0.0 0.0515
ENSG00000162415 ZSWIM5 425333 eQTL 3.48e-02 -0.0963 0.0456 0.0 0.0 0.0515
ENSG00000197429 IPP -19108 eQTL 1.06e-02 -0.113 0.0441 0.0 0.0 0.0515
ENSG00000222009 BTBD19 923060 eQTL 9.36e-05 -0.125 0.0318 0.0 0.0 0.0515
ENSG00000225447 RPS15AP10 85345 eQTL 3.68e-02 -0.152 0.0726 0.0 0.0 0.0515
ENSG00000232022 FAAHP1 -700587 eQTL 4.92e-03 -0.183 0.0648 0.00125 0.0 0.0515
ENSG00000234329 AL604028.2 79716 eQTL 1.27e-03 -0.174 0.0538 0.0 0.0 0.0515
ENSG00000281912 LINC01144 427632 eQTL 4.05e-04 0.258 0.0728 0.0 0.0 0.0515


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -55445 9.43e-06 1.18e-05 1.89e-06 7.03e-06 2.58e-06 5.12e-06 1.22e-05 2.46e-06 1.09e-05 5.5e-06 1.4e-05 6.53e-06 1.66e-05 3.95e-06 3.41e-06 6.58e-06 5.45e-06 9.52e-06 2.82e-06 3.15e-06 6.14e-06 1.04e-05 8.88e-06 3.3e-06 1.65e-05 4.33e-06 6.4e-06 5e-06 1.24e-05 8.46e-06 7e-06 1.08e-06 1.2e-06 3.52e-06 5.46e-06 2.86e-06 1.87e-06 2e-06 2.11e-06 9.42e-07 9.45e-07 1.28e-05 1.61e-06 3.18e-07 9.19e-07 1.71e-06 1.87e-06 7.25e-07 5.37e-07
ENSG00000117425 PTCH2 888289 2.66e-07 1.01e-07 3.65e-08 1.79e-07 9.02e-08 9.3e-08 1.41e-07 5.33e-08 1.41e-07 4.38e-08 1.62e-07 7.75e-08 1.26e-07 6.21e-08 5.4e-08 7.89e-08 4.63e-08 1.14e-07 5.19e-08 4.03e-08 1.04e-07 1.28e-07 1.3e-07 4.26e-08 1.31e-07 1.19e-07 1.12e-07 8.71e-08 9.88e-08 1.09e-07 9.58e-08 3.96e-08 3.09e-08 8.21e-08 9.24e-08 3.99e-08 4.84e-08 9.62e-08 7.58e-08 3.05e-08 4.27e-08 1.36e-07 4.19e-08 1.61e-08 7.26e-08 1.69e-08 1.22e-07 3.89e-09 4.79e-08
ENSG00000117448 AKR1A1 180999 1.61e-06 2.46e-06 2.51e-07 1.69e-06 4.74e-07 7.77e-07 1.33e-06 6.39e-07 1.74e-06 8.34e-07 1.97e-06 1.26e-06 2.84e-06 8.7e-07 4.8e-07 1.23e-06 1.03e-06 1.54e-06 5.3e-07 1.05e-06 8.29e-07 2.17e-06 1.68e-06 1e-06 2.65e-06 1.2e-06 1.17e-06 1.46e-06 1.67e-06 1.56e-06 1.21e-06 3.22e-07 4.59e-07 8.37e-07 9.14e-07 6.6e-07 7.01e-07 4.2e-07 6.93e-07 2.33e-07 3.45e-07 2.22e-06 5.58e-07 1.74e-07 3.5e-07 3.09e-07 7.75e-07 1.98e-07 1.76e-07
ENSG00000126088 UROD 720592 2.64e-07 1.19e-07 3.71e-08 1.84e-07 8.83e-08 9.61e-08 1.44e-07 5.37e-08 1.41e-07 4.74e-08 1.62e-07 8.59e-08 1.33e-07 6.38e-08 6e-08 7.17e-08 3.9e-08 1.18e-07 5.39e-08 4.45e-08 1.08e-07 1.23e-07 1.34e-07 3.42e-08 1.32e-07 1.16e-07 1.08e-07 9.36e-08 1.05e-07 1.12e-07 9.91e-08 3.66e-08 3.56e-08 8.65e-08 8.96e-08 3.94e-08 4.99e-08 8.93e-08 6.55e-08 3.55e-08 3.98e-08 1.35e-07 5.21e-08 1.22e-08 5.7e-08 1.83e-08 1.21e-07 1.88e-09 4.99e-08
ENSG00000132780 NASP 147696 2.91e-06 3.5e-06 5.82e-07 2.02e-06 6.17e-07 8.19e-07 2.48e-06 9.07e-07 2.73e-06 1.46e-06 3.13e-06 2.5e-06 3.93e-06 1.44e-06 8.88e-07 2.03e-06 1.57e-06 2.12e-06 1.51e-06 1.2e-06 1.53e-06 3.35e-06 2.71e-06 1.62e-06 4.02e-06 1.17e-06 1.57e-06 1.43e-06 3.06e-06 2.23e-06 2.04e-06 5.43e-07 6.46e-07 1.33e-06 1.73e-06 9.75e-07 9.25e-07 4.72e-07 1.23e-06 4.17e-07 2.11e-07 3.4e-06 3.78e-07 1.59e-07 3.64e-07 3.52e-07 7.12e-07 3.35e-07 3.73e-07
ENSG00000159588 CCDC17 107485 4.57e-06 5.24e-06 6.07e-07 3.42e-06 1.62e-06 1.52e-06 5.71e-06 1.19e-06 4.83e-06 2.85e-06 6.12e-06 2.9e-06 7.37e-06 1.92e-06 1.21e-06 3.75e-06 1.97e-06 3.96e-06 1.55e-06 1.44e-06 2.77e-06 4.88e-06 4.66e-06 1.48e-06 7.58e-06 2.19e-06 2.22e-06 1.78e-06 4.42e-06 4.23e-06 2.69e-06 4.59e-07 5.37e-07 1.69e-06 1.96e-06 1.16e-06 1.02e-06 4.82e-07 8.39e-07 4.88e-07 6.06e-07 5.74e-06 6.6e-07 1.44e-07 7.43e-07 1.21e-06 9.99e-07 7.1e-07 5.92e-07
ENSG00000159592 GPBP1L1 43429 1.16e-05 1.38e-05 2.53e-06 8.87e-06 2.42e-06 6.19e-06 1.87e-05 3.34e-06 1.5e-05 6.72e-06 1.79e-05 7.33e-06 2.24e-05 5.17e-06 4.27e-06 8.68e-06 7.38e-06 1.18e-05 3.64e-06 4.22e-06 6.77e-06 1.28e-05 1.19e-05 4.21e-06 2.26e-05 5.19e-06 7.68e-06 6.24e-06 1.5e-05 1.12e-05 9.55e-06 1.18e-06 1.43e-06 4.02e-06 6.68e-06 3e-06 1.78e-06 2.38e-06 2.65e-06 1.54e-06 1.21e-06 1.54e-05 2.36e-06 3.62e-07 1.33e-06 2.35e-06 2.48e-06 1.17e-06 8.61e-07
ENSG00000173660 \N -572156 2.74e-07 1.35e-07 5.03e-08 2.05e-07 9.79e-08 9.05e-08 1.67e-07 5.85e-08 1.45e-07 6.4e-08 1.57e-07 1.11e-07 1.52e-07 7.37e-08 6.25e-08 7.5e-08 4.01e-08 1.44e-07 6.75e-08 4.8e-08 1.27e-07 1.26e-07 1.5e-07 2.68e-08 1.63e-07 1.22e-07 1.13e-07 1.01e-07 1.23e-07 1e-07 1.08e-07 3.78e-08 3.13e-08 8.23e-08 4.84e-08 2.69e-08 4.49e-08 8.17e-08 6.76e-08 4.47e-08 5.03e-08 1.33e-07 4.83e-08 7.23e-09 3.41e-08 1.8e-08 8.74e-08 2.13e-09 4.83e-08
ENSG00000222009 BTBD19 923060 2.66e-07 1.01e-07 3.65e-08 1.78e-07 9.65e-08 9.3e-08 1.41e-07 5.33e-08 1.42e-07 4.38e-08 1.62e-07 7.88e-08 1.27e-07 6.21e-08 5.44e-08 7.89e-08 4.94e-08 1.1e-07 5.19e-08 4.03e-08 1.04e-07 1.3e-07 1.3e-07 4.26e-08 1.31e-07 1.15e-07 1.12e-07 8.7e-08 9.88e-08 1.09e-07 9.58e-08 4.22e-08 2.92e-08 8.25e-08 9.13e-08 4.02e-08 4.89e-08 9.65e-08 7.63e-08 3.07e-08 4.45e-08 1.37e-07 3.99e-08 1.91e-08 7.79e-08 1.69e-08 1.23e-07 3.92e-09 4.81e-08
ENSG00000234329 AL604028.2 79716 6.16e-06 9.1e-06 1.32e-06 4.36e-06 1.82e-06 3.43e-06 9.71e-06 2.03e-06 7.68e-06 4.28e-06 9.71e-06 4.97e-06 1.12e-05 3.74e-06 1.69e-06 5.6e-06 3.79e-06 5e-06 2.18e-06 2.63e-06 3.71e-06 7.51e-06 5.61e-06 2.32e-06 1.07e-05 3.09e-06 4.33e-06 3.19e-06 7.12e-06 7.05e-06 4.35e-06 8.89e-07 8.87e-07 2.79e-06 3.58e-06 2.04e-06 1.33e-06 1.81e-06 1.37e-06 8.9e-07 8.61e-07 8.1e-06 1.26e-06 2.2e-07 7.38e-07 1.32e-06 1.26e-06 8.28e-07 4.32e-07
ENSG00000281912 LINC01144 427632 3.53e-07 2.5e-07 6.99e-08 2.58e-07 1.08e-07 1.28e-07 3.33e-07 7.98e-08 2.04e-07 1.46e-07 2.47e-07 2.09e-07 2.94e-07 8.42e-08 7.98e-08 1.14e-07 6.63e-08 2.66e-07 9.19e-08 8.1e-08 1.59e-07 2.15e-07 2e-07 6.65e-08 2.99e-07 1.9e-07 1.39e-07 1.61e-07 1.47e-07 1.8e-07 1.76e-07 8.25e-08 4.93e-08 9.98e-08 1.01e-07 5.23e-08 8.07e-08 7.75e-08 4.72e-08 7.92e-08 4.89e-08 1.63e-07 1.7e-08 1.05e-08 6.21e-08 8.76e-09 9.52e-08 1.11e-08 6.03e-08