Genes within 1Mb (chr1:45673136:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -113851 eQTL 1.67e-09 0.358 0.0588 0.0 0.0 0.0265
ENSG00000117425 PTCH2 829883 eQTL 1.99e-02 0.167 0.0718 0.0 0.0 0.0265
ENSG00000117481 NSUN4 -667041 eQTL 4.48e-02 0.149 0.0739 0.0 0.0 0.0265
ENSG00000126088 UROD 662186 pQTL 1.13e-04 0.188 0.0486 0.0 0.0 0.0224
ENSG00000126088 UROD 662186 eQTL 4.11e-03 0.181 0.063 0.0 0.0 0.0265
ENSG00000132773 TOE1 333084 eQTL 1.68e-02 -0.0963 0.0402 0.0 0.0 0.0265
ENSG00000132780 NASP 89290 eQTL 6.93e-11 -0.317 0.048 0.00311 0.00471 0.0265
ENSG00000159588 CCDC17 49079 eQTL 7.12e-13 -0.306 0.042 0.0 0.0 0.0265
ENSG00000159592 GPBP1L1 -14977 eQTL 1.33e-02 0.0805 0.0324 0.0 0.0 0.0265
ENSG00000162415 ZSWIM5 366927 eQTL 9.62e-03 -0.165 0.0636 0.0 0.0 0.0265
ENSG00000222009 BTBD19 864654 eQTL 1.86e-02 -0.105 0.0446 0.0 0.0 0.0265
ENSG00000232022 FAAHP1 -758993 eQTL 3.60e-02 -0.191 0.0908 0.0 0.0 0.0265
ENSG00000281912 LINC01144 369226 eQTL 3.88e-02 0.211 0.102 0.0 0.0 0.0265


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000085999 \N -574552 1.28e-06 1.29e-06 2.43e-07 1.42e-06 4.65e-07 6.64e-07 1.51e-06 3.86e-07 1.42e-06 6.05e-07 1.97e-06 1.15e-06 2.53e-06 4.19e-07 4.98e-07 9.13e-07 9.81e-07 9.65e-07 5.36e-07 7.68e-07 7.74e-07 1.89e-06 8.89e-07 5.3e-07 2.42e-06 4.28e-07 1.03e-06 8.69e-07 1.44e-06 1.22e-06 7.84e-07 3.04e-07 3e-07 5.72e-07 9.55e-07 5.24e-07 6.55e-07 4.39e-07 5.08e-07 3.34e-07 3.05e-07 1.66e-06 4.26e-07 1.63e-07 3.04e-07 3.05e-07 2.74e-07 2.11e-07 1.85e-07
ENSG00000086015 MAST2 -113851 1.41e-05 1.78e-05 2.55e-06 1.04e-05 3.2e-06 7.78e-06 2.08e-05 3.51e-06 1.7e-05 9.85e-06 2.18e-05 9.68e-06 2.89e-05 7.61e-06 5.14e-06 9.28e-06 8.74e-06 1.22e-05 4.64e-06 4.29e-06 7.96e-06 1.66e-05 1.37e-05 4.69e-06 2.71e-05 5.05e-06 8.05e-06 7.72e-06 1.59e-05 1.18e-05 1.09e-05 1.18e-06 1.55e-06 4.1e-06 9.3e-06 3.58e-06 2.12e-06 2.81e-06 2.95e-06 2.93e-06 1.76e-06 1.97e-05 2.39e-06 4.31e-07 1.04e-06 2.7e-06 3.42e-06 1.23e-06 7.82e-07
ENSG00000117425 PTCH2 829883 9.83e-07 8.36e-07 1.87e-07 5.17e-07 2.33e-07 4.02e-07 6.72e-07 2.68e-07 5.88e-07 3.1e-07 1.15e-06 5.48e-07 1.07e-06 2.14e-07 3.12e-07 2.55e-07 6.07e-07 4.4e-07 3.95e-07 6.07e-07 2.57e-07 5.49e-07 4.08e-07 3.06e-07 1.28e-06 2.49e-07 4.83e-07 4.11e-07 5.03e-07 7.6e-07 4.32e-07 2.06e-07 1.27e-07 2.98e-07 5.34e-07 3.05e-07 4.16e-07 2.38e-07 1.13e-07 3.2e-07 2.98e-07 7.54e-07 5.29e-08 1.41e-07 1.84e-07 7.16e-08 1.41e-07 8.66e-08 5.47e-08
ENSG00000117448 \N 122593 1.31e-05 1.6e-05 2.53e-06 9.71e-06 3.06e-06 7.21e-06 1.95e-05 3.4e-06 1.6e-05 8.86e-06 2.04e-05 9.08e-06 2.69e-05 7.03e-06 4.71e-06 9.02e-06 8.09e-06 1.18e-05 4.21e-06 4.11e-06 7.43e-06 1.47e-05 1.29e-05 4.25e-06 2.54e-05 4.58e-06 8.02e-06 6.92e-06 1.48e-05 1.1e-05 1.03e-05 1.05e-06 1.38e-06 4.08e-06 8.83e-06 3.09e-06 1.91e-06 2.77e-06 2.73e-06 2.79e-06 1.72e-06 1.86e-05 2.25e-06 4.41e-07 9.39e-07 2.79e-06 3.21e-06 1.02e-06 6.37e-07
ENSG00000126088 UROD 662186 1.29e-06 9.53e-07 3.21e-07 1.27e-06 3.69e-07 5.87e-07 1.38e-06 4.01e-07 1.16e-06 4.11e-07 1.89e-06 6.63e-07 2.02e-06 3e-07 4.77e-07 6e-07 8.37e-07 6.1e-07 8.36e-07 4.74e-07 6.81e-07 1.28e-06 8.1e-07 6.23e-07 1.95e-06 2.8e-07 8.68e-07 7.08e-07 1.11e-06 1.21e-06 6.14e-07 2.81e-07 1.99e-07 6.78e-07 6.88e-07 4.42e-07 6.81e-07 3.47e-07 3.79e-07 2.09e-07 3.67e-07 1.62e-06 1.94e-07 1.89e-07 2.11e-07 1.46e-07 2.28e-07 5.98e-08 1.09e-07
ENSG00000126107 \N 661812 1.29e-06 9.53e-07 3.21e-07 1.27e-06 3.69e-07 5.87e-07 1.38e-06 4.01e-07 1.16e-06 4.24e-07 1.89e-06 6.63e-07 2.02e-06 3e-07 4.77e-07 6e-07 8.37e-07 6.1e-07 8.36e-07 4.74e-07 6.81e-07 1.33e-06 8.1e-07 6.23e-07 1.95e-06 2.8e-07 8.68e-07 7.08e-07 1.11e-06 1.21e-06 6.14e-07 2.81e-07 1.99e-07 6.69e-07 6.88e-07 4.42e-07 6.81e-07 3.47e-07 3.79e-07 2.09e-07 3.67e-07 1.62e-06 1.94e-07 1.89e-07 2.11e-07 1.46e-07 2.28e-07 5.98e-08 1.09e-07
ENSG00000132780 NASP 89290 1.77e-05 2.32e-05 3.38e-06 1.3e-05 4.43e-06 1.09e-05 2.62e-05 4.2e-06 2.13e-05 1.33e-05 2.83e-05 1.42e-05 3.66e-05 1.05e-05 5.6e-06 1.14e-05 1.14e-05 1.64e-05 6.32e-06 5.37e-06 9.78e-06 2.31e-05 1.85e-05 5.74e-06 3.29e-05 5.31e-06 1.06e-05 9.09e-06 2.01e-05 1.5e-05 1.31e-05 1.58e-06 2.21e-06 5.41e-06 1.15e-05 4.4e-06 2.83e-06 3.19e-06 3.63e-06 3.51e-06 1.78e-06 2.57e-05 2.67e-06 4.6e-07 1.87e-06 3.51e-06 3.97e-06 1.4e-06 1.3e-06
ENSG00000159588 CCDC17 49079 3.98e-05 3.73e-05 6.78e-06 1.84e-05 8e-06 1.86e-05 5.03e-05 7.56e-06 4.21e-05 2.58e-05 5.14e-05 2.53e-05 6.26e-05 1.8e-05 9.71e-06 2.6e-05 2.22e-05 3.08e-05 1.07e-05 8.88e-06 2.19e-05 4.67e-05 3.55e-05 1.07e-05 5.79e-05 1.06e-05 2.07e-05 1.75e-05 3.76e-05 2.5e-05 2.74e-05 2.22e-06 4.69e-06 8.55e-06 1.69e-05 7.67e-06 4.63e-06 5.03e-06 6.54e-06 4.44e-06 2.02e-06 4.33e-05 4.04e-06 5.65e-07 2.89e-06 6.13e-06 6.76e-06 2.74e-06 1.79e-06
ENSG00000159592 GPBP1L1 -14977 8.36e-05 8.25e-05 2.5e-05 4.62e-05 2.64e-05 4.62e-05 0.000121 3.16e-05 0.000108 8.79e-05 0.00014 6.35e-05 0.000149 4.57e-05 3.01e-05 8.74e-05 5.76e-05 9.79e-05 3.11e-05 2.76e-05 7.68e-05 0.00012 0.0001 3.55e-05 0.000153 4.03e-05 6.79e-05 5.68e-05 0.000106 5.91e-05 7.81e-05 1.07e-05 1.99e-05 3.25e-05 4.17e-05 2.19e-05 1.8e-05 1.8e-05 1.85e-05 1.42e-05 9.6e-06 9.01e-05 1.2e-05 2.48e-06 1.17e-05 2.17e-05 2.19e-05 1.58e-05 1.02e-05
ENSG00000162415 ZSWIM5 366927 3.91e-06 4.7e-06 8.49e-07 2.64e-06 1.32e-06 1.39e-06 2.84e-06 9.94e-07 3.17e-06 1.99e-06 4.9e-06 3.37e-06 6.49e-06 2.17e-06 1.2e-06 2.01e-06 2.02e-06 2.38e-06 1.41e-06 1.09e-06 2.35e-06 4.07e-06 3.44e-06 1.84e-06 4.75e-06 1.13e-06 2.39e-06 1.67e-06 3.79e-06 2.87e-06 2.01e-06 4.38e-07 7.75e-07 1.74e-06 2.04e-06 9.23e-07 9.21e-07 4.5e-07 1.25e-06 5.93e-07 7.37e-07 4.74e-06 3.64e-07 1.38e-07 3.62e-07 5.86e-07 9.33e-07 3.34e-07 1.78e-07
ENSG00000281912 LINC01144 369226 3.75e-06 4.63e-06 7.66e-07 2.63e-06 1.32e-06 1.39e-06 2.77e-06 9.93e-07 3.18e-06 1.98e-06 4.84e-06 3.56e-06 6.48e-06 2.16e-06 1.14e-06 1.99e-06 2.04e-06 2.38e-06 1.35e-06 1.04e-06 2.28e-06 3.9e-06 3.4e-06 1.8e-06 4.83e-06 1.09e-06 2.43e-06 1.55e-06 3.79e-06 2.94e-06 1.89e-06 4.38e-07 7.75e-07 1.8e-06 2e-06 8.67e-07 9.06e-07 4.51e-07 1.28e-06 5.61e-07 7.54e-07 4.58e-06 4.01e-07 1.38e-07 3.47e-07 5.34e-07 8.86e-07 3.19e-07 1.78e-07