Genes within 1Mb (chr1:45666932:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 175769 eQTL 2.35e-06 0.353 0.0743 0.00303 0.00239 0.00981
ENSG00000117448 AKR1A1 116389 eQTL 1.14e-04 -0.218 0.0564 0.00285 0.00219 0.00981
ENSG00000117450 PRDX1 143885 pQTL 1.31e-02 0.206 0.0828 0.0 0.0 0.0101
ENSG00000117480 FAAH -727385 eQTL 1.35e-09 0.642 0.105 0.0 0.0 0.00981
ENSG00000117481 NSUN4 -673245 eQTL 9.79e-20 1.09 0.117 0.0 0.0 0.00981
ENSG00000126088 UROD 655982 eQTL 5.87e-03 -0.288 0.104 0.0 0.0 0.00981
ENSG00000142959 BEST4 878762 eQTL 3.46e-02 0.296 0.14 0.0 0.0 0.00981
ENSG00000159588 CCDC17 42875 eQTL 5.02e-09 -0.414 0.0702 0.0 0.0 0.00981
ENSG00000159596 TMEM69 -21249 eQTL 5.27e-03 -0.308 0.11 0.0 0.0 0.00981
ENSG00000198520 ARMH1 992219 eQTL 7.17e-03 0.24 0.089 0.0016 0.0 0.00981
ENSG00000234329 AL604028.2 15106 eQTL 4.26e-02 0.253 0.125 0.0 0.0 0.00981
ENSG00000281912 LINC01144 363022 eQTL 4.84e-02 0.334 0.169 0.0 0.0 0.00981


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 175769 2.78e-06 3.13e-06 4.51e-07 2.07e-06 4.74e-07 7.7e-07 2.22e-06 5.61e-07 1.85e-06 1.03e-06 2.48e-06 1.45e-06 3.66e-06 1.29e-06 1e-06 1.54e-06 1.04e-06 2.24e-06 8.58e-07 7.22e-07 8.12e-07 3.15e-06 1.75e-06 1.01e-06 3.45e-06 1.37e-06 1.47e-06 1.42e-06 1.84e-06 1.86e-06 1.89e-06 2.83e-07 3.95e-07 8e-07 1.26e-06 7.09e-07 7.76e-07 3.34e-07 9.37e-07 2.57e-07 2.93e-07 3.71e-06 6.52e-07 1.6e-07 3.5e-07 3.47e-07 5.48e-07 2.49e-07 1.59e-07
ENSG00000117448 AKR1A1 116389 7.08e-06 8.81e-06 8.29e-07 3.67e-06 1.57e-06 1.53e-06 8.6e-06 1.04e-06 4.65e-06 3.29e-06 7.41e-06 2.82e-06 9.98e-06 2.13e-06 1.7e-06 3.9e-06 1.97e-06 3.78e-06 1.43e-06 1.15e-06 2.89e-06 7.38e-06 4.6e-06 1.49e-06 8.48e-06 2.08e-06 3.53e-06 1.71e-06 5.1e-06 4.93e-06 3.38e-06 4.17e-07 5.21e-07 1.6e-06 1.93e-06 1.06e-06 1.07e-06 4.24e-07 9.06e-07 5.01e-07 2.8e-07 8.1e-06 8.89e-07 1.51e-07 7.87e-07 1.32e-06 1.17e-06 7.43e-07 6.17e-07
ENSG00000117480 FAAH -727385 2.66e-07 1.01e-07 3.35e-08 1.78e-07 9.65e-08 9.3e-08 1.42e-07 5.35e-08 1.37e-07 4.24e-08 1.62e-07 7.75e-08 1.26e-07 6.21e-08 5.53e-08 7.89e-08 5.1e-08 1.1e-07 5.2e-08 3.29e-08 1.06e-07 1.3e-07 1.29e-07 4.98e-08 1.29e-07 1.15e-07 1.1e-07 8.71e-08 9.97e-08 1.1e-07 9.58e-08 3.82e-08 2.74e-08 8.25e-08 9.07e-08 3.93e-08 4.51e-08 9.2e-08 8.3e-08 3.34e-08 3.55e-08 1.36e-07 4.12e-08 1.56e-08 8.16e-08 1.72e-08 1.34e-07 3.99e-09 4.77e-08
ENSG00000117481 NSUN4 -673245 2.66e-07 1.1e-07 3.69e-08 1.78e-07 9.65e-08 9.57e-08 1.41e-07 5.49e-08 1.42e-07 4.38e-08 1.6e-07 8.14e-08 1.26e-07 6.21e-08 5.84e-08 7.5e-08 4.94e-08 1.1e-07 5.19e-08 3.29e-08 1.05e-07 1.28e-07 1.29e-07 4.82e-08 1.31e-07 1.19e-07 1.12e-07 8.71e-08 9.97e-08 1.09e-07 9.58e-08 3.76e-08 2.74e-08 8.21e-08 8.87e-08 3.87e-08 4.79e-08 9.35e-08 7.92e-08 3.09e-08 3.35e-08 1.37e-07 3.98e-08 1.7e-08 8.03e-08 1.69e-08 1.26e-07 3.92e-09 4.91e-08
ENSG00000126088 UROD 655982 2.66e-07 1.1e-07 3.65e-08 1.79e-07 9.02e-08 9.57e-08 1.41e-07 5.49e-08 1.41e-07 4.38e-08 1.59e-07 8.36e-08 1.3e-07 6.21e-08 6e-08 7.5e-08 4.94e-08 1.14e-07 5.19e-08 3.59e-08 1.05e-07 1.27e-07 1.29e-07 4.67e-08 1.31e-07 1.19e-07 1.12e-07 8.7e-08 9.88e-08 1.1e-07 9.58e-08 3.95e-08 2.74e-08 8.68e-08 8.82e-08 4.02e-08 4.75e-08 9.35e-08 7.63e-08 3.09e-08 3.25e-08 1.35e-07 3.91e-08 1.75e-08 7.91e-08 1.69e-08 1.26e-07 3.89e-09 5.04e-08
ENSG00000159588 CCDC17 42875 2.73e-05 2.26e-05 2.52e-06 9.8e-06 2.42e-06 6.55e-06 2.32e-05 2.25e-06 1.67e-05 8.22e-06 1.99e-05 7.45e-06 2.86e-05 6.43e-06 5.19e-06 9.51e-06 8.03e-06 1.47e-05 3.63e-06 3.61e-06 7.26e-06 1.78e-05 1.4e-05 4.21e-06 2.49e-05 5.25e-06 8.02e-06 7.23e-06 1.66e-05 1.2e-05 1.16e-05 1.01e-06 1.4e-06 3.69e-06 6.37e-06 2.8e-06 1.71e-06 2.09e-06 2.99e-06 1.89e-06 9.63e-07 2.21e-05 2.64e-06 2.27e-07 1.35e-06 2.08e-06 2.13e-06 7.33e-07 8.3e-07
ENSG00000159596 TMEM69 -21249 3.59e-05 2.96e-05 4.32e-06 1.32e-05 4.03e-06 1.1e-05 3.63e-05 3.72e-06 2.41e-05 1.2e-05 3.05e-05 1.19e-05 3.91e-05 1.07e-05 6.24e-06 1.37e-05 1.24e-05 2.1e-05 6.02e-06 5.26e-06 1.11e-05 2.66e-05 2.41e-05 6.56e-06 3.46e-05 6.43e-06 1.09e-05 9.9e-06 2.54e-05 1.88e-05 1.61e-05 1.66e-06 2.11e-06 5.21e-06 9.3e-06 4.49e-06 2.4e-06 2.79e-06 3.99e-06 2.85e-06 1.63e-06 3.18e-05 3.07e-06 3.18e-07 2.08e-06 2.75e-06 3.35e-06 1.5e-06 1.4e-06