Genes within 1Mb (chr1:45609628:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 118465 eQTL 2.93e-02 0.0665 0.0304 0.0 0.0 0.0608
ENSG00000086015 MAST2 -177359 eQTL 5.72e-19 0.351 0.0386 0.0 0.0 0.0608
ENSG00000117425 PTCH2 766375 eQTL 2.50e-02 0.108 0.0483 0.0 0.0 0.0608
ENSG00000117448 AKR1A1 59085 eQTL 8.90e-05 -0.09 0.0229 0.00145 0.00273 0.0608
ENSG00000117461 PIK3R3 -523408 eQTL 4.60e-02 -0.0824 0.0412 0.0 0.0 0.0608
ENSG00000117480 FAAH -784689 eQTL 5.14e-03 0.121 0.0432 0.0 0.0 0.0608
ENSG00000117481 NSUN4 -730549 eQTL 1.47e-03 0.158 0.0495 0.0 0.0 0.0608
ENSG00000126088 UROD 598678 pQTL 6.21e-03 0.0824 0.0301 0.0 0.0 0.0603
ENSG00000126106 TMEM53 935147 eQTL 4.66e-02 0.105 0.0527 0.0 0.0 0.0608
ENSG00000132773 TOE1 269576 eQTL 6.69e-03 -0.0734 0.027 0.0 0.0 0.0608
ENSG00000132780 NASP 25782 eQTL 8.39e-11 -0.212 0.0323 0.00213 0.00197 0.0608
ENSG00000159588 CCDC17 -14429 eQTL 7.05e-34 -0.339 0.0269 0.0767 0.0797 0.0608
ENSG00000159592 GPBP1L1 -78485 eQTL 7.88e-03 0.058 0.0218 0.0 0.0 0.0608
ENSG00000197429 IPP -141022 eQTL 4.20e-03 -0.119 0.0414 0.0 0.0 0.0608
ENSG00000222009 BTBD19 801146 eQTL 2.65e-03 -0.0902 0.03 0.0 0.0 0.0608
ENSG00000225447 RPS15AP10 -36569 eQTL 6.75e-03 -0.185 0.0681 0.0 0.0 0.0608
ENSG00000230896 AL604028.1 -87447 eQTL 3.58e-02 -0.162 0.0772 0.0 0.0 0.0608
ENSG00000232022 FAAHP1 -822501 eQTL 3.23e-02 -0.131 0.061 0.0 0.0 0.0608
ENSG00000234329 AL604028.2 -42198 eQTL 2.05e-02 -0.117 0.0506 0.0 0.0 0.0608
ENSG00000281912 LINC01144 305718 eQTL 3.85e-05 0.282 0.0682 0.0149 0.0143 0.0608


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 118465 3.12e-05 3.69e-05 7.58e-06 1.88e-05 9.44e-06 1.81e-05 5.07e-05 8.42e-06 4.72e-05 2.67e-05 5.4e-05 2.52e-05 7.22e-05 1.72e-05 9.84e-06 3.15e-05 2.39e-05 3.49e-05 1.26e-05 1.25e-05 2.59e-05 5.39e-05 3.98e-05 1.13e-05 5.87e-05 1.55e-05 2.48e-05 2.26e-05 4.58e-05 2.17e-05 2.65e-05 3.36e-06 5.75e-06 1.11e-05 1.49e-05 8.12e-06 4.88e-06 5.53e-06 6.79e-06 4.37e-06 2.16e-06 4.56e-05 4.31e-06 7.74e-07 4.6e-06 8.04e-06 7.62e-06 3.78e-06 2.78e-06
ENSG00000086015 MAST2 -177359 1.48e-05 2.22e-05 5.07e-06 1.39e-05 6.73e-06 9.68e-06 2.8e-05 5.69e-06 2.53e-05 1.49e-05 2.99e-05 1.38e-05 4.26e-05 9.29e-06 5.97e-06 1.64e-05 1.3e-05 1.96e-05 7.62e-06 8e-06 1.4e-05 2.99e-05 2.45e-05 7.31e-06 3.39e-05 7.7e-06 1.6e-05 1.28e-05 2.67e-05 1.38e-05 1.33e-05 1.86e-06 2.95e-06 7.85e-06 9.6e-06 5.68e-06 3.52e-06 3.25e-06 3.98e-06 3.56e-06 1.87e-06 2.81e-05 2.72e-06 5.95e-07 2.84e-06 5.19e-06 4.55e-06 2.19e-06 1.52e-06
ENSG00000117425 PTCH2 766375 1.31e-06 9.19e-07 3.2e-07 1.14e-06 5.1e-07 4.77e-07 1.09e-06 3.44e-07 1.15e-06 3.83e-07 1.39e-06 5.73e-07 2e-06 2.68e-07 4.41e-07 7.13e-07 8.3e-07 5.5e-07 8.15e-07 5.15e-07 7.54e-07 1.36e-06 8.6e-07 6.25e-07 1.7e-06 3.17e-07 8.98e-07 7.24e-07 9.15e-07 1.1e-06 5.39e-07 2.7e-07 1.99e-07 6.68e-07 4.17e-07 4.9e-07 7.4e-07 3.5e-07 2.56e-07 2.45e-07 1.47e-07 1.19e-06 1.94e-07 1.9e-07 3.89e-07 2.74e-07 2.37e-07 5.35e-08 1.91e-07
ENSG00000117448 AKR1A1 59085 5.89e-05 6.18e-05 1.44e-05 2.87e-05 1.74e-05 3.04e-05 8.32e-05 1.77e-05 7.66e-05 4.95e-05 9.15e-05 4.13e-05 0.000117 3.17e-05 1.83e-05 5.63e-05 4.11e-05 6.33e-05 2.13e-05 1.98e-05 4.22e-05 8.36e-05 7.05e-05 1.93e-05 9.94e-05 2.79e-05 4.02e-05 4.14e-05 7.87e-05 3.61e-05 4.76e-05 5.74e-06 9.78e-06 1.96e-05 2.28e-05 1.4e-05 7.79e-06 1.05e-05 1.1e-05 8e-06 3.78e-06 6.58e-05 6.31e-06 1.38e-06 7.02e-06 1.4e-05 1.32e-05 6.62e-06 5.52e-06
ENSG00000117481 NSUN4 -730549 1.25e-06 9.48e-07 3.21e-07 1.26e-06 4.41e-07 5.4e-07 1.26e-06 3.63e-07 1.35e-06 4.44e-07 1.76e-06 6.02e-07 2.12e-06 2.9e-07 4.31e-07 8.25e-07 8.95e-07 6.5e-07 6.6e-07 4.63e-07 6.27e-07 1.72e-06 9.01e-07 6.44e-07 1.92e-06 3.91e-07 9.55e-07 9.43e-07 1.12e-06 1.22e-06 5.67e-07 3.27e-07 2.57e-07 6.95e-07 4.91e-07 5.42e-07 7.26e-07 3.3e-07 3.25e-07 2.93e-07 1.95e-07 1.43e-06 3.5e-07 1.96e-07 3.99e-07 3.12e-07 2.28e-07 4.88e-08 2.75e-07
ENSG00000126088 UROD 598678 1.28e-06 1.84e-06 2.31e-07 1.7e-06 8.67e-07 6.95e-07 1.26e-06 5.79e-07 1.71e-06 7.65e-07 1.83e-06 1.15e-06 2.98e-06 4.89e-07 3.98e-07 1.06e-06 9.51e-07 1.3e-06 1.08e-06 1.37e-06 1.4e-06 2.34e-06 1.6e-06 9.28e-07 2.46e-06 9.19e-07 1.18e-06 1.46e-06 1.7e-06 1.39e-06 7.86e-07 5.4e-07 4.15e-07 9.68e-07 7.59e-07 1.03e-06 7.48e-07 3.79e-07 5.47e-07 2.57e-07 2.81e-07 1.93e-06 5.93e-07 1.62e-07 4.01e-07 3.7e-07 4.63e-07 2.4e-07 1.74e-07
ENSG00000132773 TOE1 269576 7.84e-06 1.04e-05 2.45e-06 7.63e-06 3.08e-06 4.42e-06 1.12e-05 2.62e-06 1.07e-05 6.58e-06 1.4e-05 6.14e-06 1.91e-05 3.56e-06 3.46e-06 8.14e-06 5.99e-06 8.13e-06 3.68e-06 4.29e-06 7.03e-06 1.28e-05 1.01e-05 3.47e-06 1.52e-05 4.33e-06 7.6e-06 6.04e-06 1.21e-05 7.95e-06 5.96e-06 1.58e-06 1.47e-06 3.93e-06 4.96e-06 3.28e-06 1.76e-06 2.39e-06 2.11e-06 1.65e-06 1.28e-06 1.31e-05 1.61e-06 4.31e-07 1.95e-06 2.85e-06 2.6e-06 1.26e-06 1.04e-06
ENSG00000132780 NASP 25782 7.74e-05 7.84e-05 2.42e-05 4.19e-05 2.68e-05 4.3e-05 0.000113 2.48e-05 9.98e-05 7.33e-05 0.000124 5.73e-05 0.000142 4.37e-05 2.81e-05 7.79e-05 5.58e-05 9.51e-05 3.05e-05 2.59e-05 6.56e-05 0.000111 9.67e-05 3.07e-05 0.000138 3.93e-05 5.97e-05 5.53e-05 0.000104 5.11e-05 6.85e-05 8.82e-06 1.48e-05 2.88e-05 3.3e-05 2e-05 1.27e-05 1.58e-05 1.69e-05 1.16e-05 7.89e-06 8.23e-05 1.08e-05 2.35e-06 1.13e-05 1.87e-05 1.86e-05 1.32e-05 9.23e-06
ENSG00000159588 CCDC17 -14429 8.92e-05 8.73e-05 3.17e-05 5.33e-05 3.49e-05 4.93e-05 0.000132 3.22e-05 0.000122 9.31e-05 0.00015 6.79e-05 0.000163 5.08e-05 3.36e-05 9.27e-05 6.53e-05 0.00011 3.73e-05 3.46e-05 8.57e-05 0.000129 0.000113 3.82e-05 0.000155 4.87e-05 7.04e-05 6.66e-05 0.000115 6.45e-05 8.39e-05 1.27e-05 2.2e-05 3.8e-05 4.29e-05 2.56e-05 2.05e-05 2.25e-05 2.28e-05 1.47e-05 1.32e-05 9.11e-05 1.39e-05 2.96e-06 1.42e-05 2.63e-05 2.32e-05 1.67e-05 1.26e-05
ENSG00000159592 GPBP1L1 -78485 5.04e-05 5.32e-05 1.17e-05 2.48e-05 1.37e-05 2.49e-05 7.11e-05 1.41e-05 6.63e-05 3.98e-05 7.93e-05 3.61e-05 0.000101 2.56e-05 1.45e-05 4.6e-05 3.53e-05 5.21e-05 1.71e-05 1.76e-05 3.47e-05 7.39e-05 5.88e-05 1.51e-05 8.28e-05 2.26e-05 3.48e-05 3.56e-05 6.7e-05 3.09e-05 4.06e-05 4.83e-06 8.02e-06 1.69e-05 1.91e-05 1.09e-05 6.56e-06 8.22e-06 9.02e-06 6.18e-06 2.81e-06 5.91e-05 5.36e-06 1.12e-06 6.36e-06 1.14e-05 1.08e-05 5.82e-06 4.1e-06
ENSG00000222009 BTBD19 801146 1.11e-06 9.37e-07 2.88e-07 9.36e-07 4.25e-07 4.51e-07 8.96e-07 3.38e-07 1.11e-06 3.8e-07 1.37e-06 5.5e-07 1.62e-06 2.29e-07 4.17e-07 5.81e-07 8.26e-07 5.48e-07 8.35e-07 6.33e-07 8.11e-07 1.17e-06 7.79e-07 5.4e-07 1.52e-06 2.8e-07 7.55e-07 7.59e-07 7.61e-07 1.01e-06 4.59e-07 2.6e-07 2.16e-07 5.45e-07 3.54e-07 4.6e-07 6.1e-07 3.18e-07 1.49e-07 9.07e-08 1.18e-07 9.76e-07 1.24e-07 1.99e-07 3.3e-07 2.18e-07 1.9e-07 8.87e-08 1.56e-07
ENSG00000230896 AL604028.1 -87447 4.62e-05 4.91e-05 1.07e-05 2.29e-05 1.24e-05 2.3e-05 6.51e-05 1.25e-05 6.17e-05 3.63e-05 7.48e-05 3.32e-05 9.35e-05 2.34e-05 1.32e-05 4.28e-05 3.23e-05 4.69e-05 1.56e-05 1.63e-05 3.2e-05 6.97e-05 5.41e-05 1.42e-05 7.53e-05 2.09e-05 3.24e-05 3.19e-05 6.16e-05 2.88e-05 3.73e-05 4.37e-06 7.25e-06 1.51e-05 1.81e-05 1.06e-05 6.12e-06 7.29e-06 8.56e-06 5.5e-06 2.65e-06 5.65e-05 4.96e-06 1.11e-06 6.1e-06 1.08e-05 1.03e-05 5.14e-06 3.89e-06
ENSG00000234329 AL604028.2 -42198 6.76e-05 6.9e-05 1.91e-05 3.32e-05 2.11e-05 3.58e-05 9.74e-05 2.03e-05 8.68e-05 6.01e-05 0.000105 4.78e-05 0.000127 3.7e-05 2.24e-05 6.51e-05 4.75e-05 7.72e-05 2.56e-05 2.22e-05 5.22e-05 9.59e-05 8.08e-05 2.38e-05 0.000116 3.38e-05 4.84e-05 4.68e-05 8.87e-05 4.22e-05 5.73e-05 6.71e-06 1.15e-05 2.3e-05 2.62e-05 1.63e-05 9.36e-06 1.32e-05 1.36e-05 9.39e-06 4.64e-06 7.27e-05 7.7e-06 1.72e-06 8.76e-06 1.58e-05 1.59e-05 9.11e-06 7.35e-06
ENSG00000281912 LINC01144 305718 5.93e-06 9.31e-06 1.56e-06 6.13e-06 2.42e-06 3.93e-06 9.48e-06 2.12e-06 9.16e-06 5.34e-06 1.11e-05 4.99e-06 1.4e-05 4e-06 2.37e-06 6.54e-06 4.16e-06 6.21e-06 2.99e-06 3.25e-06 6.46e-06 1.04e-05 7.14e-06 3.36e-06 1.18e-05 3.72e-06 6.34e-06 4.83e-06 8.33e-06 7.18e-06 4.46e-06 1.23e-06 1.22e-06 3.44e-06 3.69e-06 2.79e-06 1.77e-06 2.06e-06 1.6e-06 9.85e-07 9.63e-07 1.01e-05 1.48e-06 3.99e-07 1.58e-06 2.52e-06 1.93e-06 7.23e-07 6.66e-07