Genes within 1Mb (chr1:45607925:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 116762 eQTL 3.10e-02 0.065 0.0301 0.0 0.0 0.0628
ENSG00000086015 MAST2 -179062 eQTL 5.18e-18 0.338 0.0383 0.0 0.0 0.0628
ENSG00000117425 PTCH2 764672 eQTL 1.75e-02 0.113 0.0477 0.0 0.0 0.0628
ENSG00000117448 AKR1A1 57382 eQTL 1.14e-04 -0.0876 0.0226 0.00143 0.00247 0.0628
ENSG00000117461 PIK3R3 -525111 eQTL 1.86e-02 -0.0959 0.0407 0.0 0.0 0.0628
ENSG00000117480 FAAH -786392 eQTL 7.28e-03 0.115 0.0427 0.0 0.0 0.0628
ENSG00000117481 NSUN4 -732252 eQTL 1.24e-03 0.158 0.0489 0.0 0.0 0.0628
ENSG00000126088 UROD 596975 pQTL 6.29e-03 0.0811 0.0296 0.0 0.0 0.0625
ENSG00000126106 TMEM53 933444 eQTL 1.60e-02 0.125 0.052 0.0 0.0 0.0628
ENSG00000132773 TOE1 267873 eQTL 1.50e-02 -0.0651 0.0267 0.0 0.0 0.0628
ENSG00000132780 NASP 24079 eQTL 1.70e-10 -0.206 0.0319 0.0011 0.0 0.0628
ENSG00000159588 CCDC17 -16132 eQTL 2.68e-32 -0.327 0.0266 0.00176 0.00172 0.0628
ENSG00000159592 GPBP1L1 -80188 eQTL 9.14e-03 0.0563 0.0215 0.0 0.0 0.0628
ENSG00000197429 IPP -142725 eQTL 2.53e-03 -0.124 0.0408 0.0 0.0 0.0628
ENSG00000222009 BTBD19 799443 eQTL 9.76e-03 -0.0767 0.0296 0.0 0.0 0.0628
ENSG00000225447 RPS15AP10 -38272 eQTL 1.65e-02 -0.162 0.0673 0.0 0.0 0.0628
ENSG00000230896 AL604028.1 -89150 eQTL 1.10e-02 -0.194 0.0762 0.00135 0.0 0.0628
ENSG00000232022 FAAHP1 -824204 eQTL 3.59e-02 -0.127 0.0603 0.0 0.0 0.0628
ENSG00000234329 AL604028.2 -43901 eQTL 4.41e-02 -0.101 0.0501 0.0 0.0 0.0628
ENSG00000281912 LINC01144 304015 eQTL 9.44e-05 0.264 0.0674 0.00703 0.00655 0.0628


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -179062 2.75e-06 4.19e-06 6.91e-07 2.02e-06 9.66e-07 7.73e-07 6.05e-06 6.85e-07 2.28e-06 8.28e-07 3.36e-06 1.39e-06 4.6e-06 1.36e-06 9.21e-07 1.53e-06 1.84e-06 2.08e-06 9.83e-07 1.25e-06 1.11e-06 3.09e-06 4.59e-06 1.06e-06 5.3e-06 1.21e-06 1.8e-06 1.35e-06 4.46e-06 3.62e-06 2.06e-06 2.48e-07 3e-07 1.25e-06 1.98e-06 6.14e-07 6.72e-07 4.19e-07 3.25e-07 3.15e-07 2.8e-07 3.28e-06 4.16e-07 1.62e-07 3.63e-07 3.24e-07 4.17e-07 1.15e-07 1.98e-07
ENSG00000117425 PTCH2 764672 2.66e-07 1.3e-07 3.71e-08 1.82e-07 9.02e-08 9.87e-08 1.6e-07 5.35e-08 1.4e-07 4.24e-08 1.56e-07 8.03e-08 1.33e-07 6.38e-08 5.53e-08 8.01e-08 4.18e-08 1.14e-07 5.19e-08 3.88e-08 1.04e-07 1.28e-07 1.34e-07 4.53e-08 1.4e-07 1.16e-07 1.08e-07 8.7e-08 1.05e-07 1.12e-07 9.91e-08 3.76e-08 2.74e-08 8.82e-08 8.94e-08 4.07e-08 4.79e-08 9.56e-08 8.55e-08 3.12e-08 3.66e-08 1.36e-07 4.1e-08 1.79e-08 5.75e-08 1.72e-08 1.3e-07 4.7e-09 4.61e-08
ENSG00000117448 AKR1A1 57382 9.86e-06 1.33e-05 2.55e-06 7.29e-06 2.5e-06 4.28e-06 2.5e-05 2.25e-06 1.18e-05 6.2e-06 1.69e-05 6.27e-06 2.18e-05 3.99e-06 3.49e-06 8.06e-06 6.5e-06 1.11e-05 3.29e-06 3.14e-06 6.81e-06 1.21e-05 2.11e-05 3.7e-06 2.67e-05 4.48e-06 7.41e-06 4.71e-06 2.03e-05 1.2e-05 7.65e-06 1.02e-06 1.12e-06 3.37e-06 5.76e-06 2.56e-06 1.71e-06 1.99e-06 1.46e-06 1.01e-06 1.01e-06 1.48e-05 1.37e-06 1.96e-07 1.02e-06 1.73e-06 1.75e-06 6.92e-07 6.07e-07
ENSG00000117481 NSUN4 -732252 2.66e-07 1.27e-07 3.88e-08 1.81e-07 8.92e-08 9.61e-08 1.73e-07 5.35e-08 1.41e-07 4.24e-08 1.62e-07 7.88e-08 1.41e-07 6.56e-08 5.84e-08 7.89e-08 4.18e-08 1.18e-07 5.19e-08 4.03e-08 1.08e-07 1.27e-07 1.39e-07 4.54e-08 1.5e-07 1.16e-07 1.06e-07 8.7e-08 1.08e-07 1.1e-07 9.64e-08 3.95e-08 2.74e-08 8.65e-08 8.38e-08 4.02e-08 4.72e-08 9.49e-08 8.55e-08 3.09e-08 3.55e-08 1.36e-07 3.99e-08 1.88e-08 5.43e-08 1.7e-08 1.26e-07 4.6e-09 4.74e-08
ENSG00000132780 NASP 24079 2.02e-05 2.56e-05 4.32e-06 1.29e-05 4.07e-06 9.05e-06 3.78e-05 3.67e-06 2.19e-05 1.11e-05 2.93e-05 1.08e-05 3.74e-05 9.56e-06 5.31e-06 1.39e-05 1.14e-05 1.93e-05 6.31e-06 4.92e-06 9.78e-06 2.36e-05 2.73e-05 6.73e-06 3.96e-05 5.73e-06 1.05e-05 8.71e-06 2.71e-05 1.93e-05 1.44e-05 1.65e-06 1.61e-06 5.15e-06 9.3e-06 4.22e-06 1.87e-06 2.81e-06 3.21e-06 2.37e-06 1.55e-06 2.81e-05 2.66e-06 3.6e-07 2.03e-06 2.68e-06 3.43e-06 1.35e-06 1.36e-06
ENSG00000159588 CCDC17 -16132 2.89e-05 2.96e-05 5.6e-06 1.44e-05 5.23e-06 1.23e-05 4.22e-05 4.07e-06 2.7e-05 1.36e-05 3.44e-05 1.46e-05 4.29e-05 1.23e-05 6.08e-06 1.67e-05 1.47e-05 2.26e-05 7.51e-06 5.66e-06 1.29e-05 2.83e-05 2.99e-05 8.06e-06 4.33e-05 6.74e-06 1.27e-05 1.09e-05 3.01e-05 2.23e-05 1.74e-05 1.61e-06 2.25e-06 6.33e-06 1.06e-05 4.81e-06 2.62e-06 3.05e-06 3.75e-06 2.9e-06 1.64e-06 3.4e-05 2.99e-06 3.62e-07 2.18e-06 3.29e-06 3.79e-06 1.44e-06 1.56e-06
ENSG00000159592 GPBP1L1 -80188 7.7e-06 1.09e-05 2.45e-06 5.02e-06 2.38e-06 2.96e-06 1.98e-05 2.03e-06 9.21e-06 4.89e-06 1.23e-05 5.25e-06 1.48e-05 4.03e-06 2.44e-06 6.52e-06 4.99e-06 7.72e-06 2.63e-06 2.83e-06 4.94e-06 9.52e-06 1.67e-05 3.21e-06 2.07e-05 3.55e-06 5.26e-06 3.1e-06 1.66e-05 9.24e-06 5.07e-06 9.54e-07 7.31e-07 2.78e-06 4.6e-06 1.7e-06 1.14e-06 2.07e-06 8.51e-07 7.21e-07 7.41e-07 1.16e-05 8.87e-07 1.9e-07 7.98e-07 9.55e-07 1.16e-06 7.14e-07 4.14e-07
ENSG00000230896 AL604028.1 -89150 6.7e-06 9.73e-06 2.25e-06 4.47e-06 2.58e-06 2.14e-06 1.73e-05 1.84e-06 7.74e-06 4.22e-06 1.11e-05 4.74e-06 1.31e-05 3.61e-06 2.13e-06 6.09e-06 4.52e-06 6.85e-06 2.56e-06 2.79e-06 4.57e-06 8.06e-06 1.47e-05 2.87e-06 1.8e-05 3.09e-06 4.68e-06 2.41e-06 1.53e-05 8.32e-06 4.49e-06 8.06e-07 4.63e-07 2.63e-06 3.88e-06 1.32e-06 1.07e-06 1.86e-06 9.42e-07 5.91e-07 6.45e-07 9.56e-06 8.05e-07 1.88e-07 7.7e-07 1.08e-06 9.07e-07 6.58e-07 5.22e-07
ENSG00000281912 LINC01144 304015 1.26e-06 1.07e-06 2.59e-07 1.19e-06 2.19e-07 4.51e-07 1.25e-06 1.91e-07 1.12e-06 2.87e-07 1.39e-06 5.75e-07 1.83e-06 2.55e-07 4.43e-07 3.96e-07 1.13e-06 6.1e-07 3.5e-07 3.54e-07 2.97e-07 7.73e-07 9.11e-07 3.96e-07 2.25e-06 3.28e-07 7.97e-07 3.51e-07 1.44e-06 1.31e-06 5.67e-07 7.33e-08 5.19e-08 2.72e-07 5.85e-07 7.92e-08 1.08e-07 1.06e-07 4.75e-08 5.54e-08 6.21e-08 1.05e-06 5.03e-08 1.65e-07 1.81e-07 1.55e-08 1.29e-07 2.23e-09 4.72e-08