Genes within 1Mb (chr1:45589105:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 97942 eQTL 2.29e-02 0.0698 0.0306 0.0 0.0 0.0608
ENSG00000086015 MAST2 -197882 eQTL 1.31e-18 0.35 0.0389 0.0 0.0 0.0608
ENSG00000117425 PTCH2 745852 eQTL 2.77e-02 0.107 0.0486 0.0 0.0 0.0608
ENSG00000117448 AKR1A1 38562 eQTL 6.54e-05 -0.0923 0.023 0.00177 0.00369 0.0608
ENSG00000117480 FAAH -805212 eQTL 5.56e-03 0.121 0.0435 0.0 0.0 0.0608
ENSG00000117481 NSUN4 -751072 eQTL 1.33e-03 0.16 0.0498 0.0 0.0 0.0608
ENSG00000126088 UROD 578155 pQTL 5.55e-03 0.0837 0.0301 0.0 0.0 0.0603
ENSG00000126106 TMEM53 914624 eQTL 4.13e-02 0.108 0.053 0.0 0.0 0.0608
ENSG00000132773 TOE1 249053 eQTL 6.26e-03 -0.0745 0.0272 0.0 0.0 0.0608
ENSG00000132780 NASP 5259 eQTL 1.27e-10 -0.211 0.0325 0.00143 0.00127 0.0608
ENSG00000159588 CCDC17 -34952 eQTL 1.50e-33 -0.34 0.0271 0.0423 0.0412 0.0608
ENSG00000159592 GPBP1L1 -99008 eQTL 7.50e-03 0.0588 0.0219 0.0 0.0 0.0608
ENSG00000197429 IPP -161545 eQTL 4.70e-03 -0.118 0.0416 0.0 0.0 0.0608
ENSG00000222009 BTBD19 780623 eQTL 1.98e-03 -0.0935 0.0301 0.0 0.0 0.0608
ENSG00000225447 RPS15AP10 -57092 eQTL 6.36e-03 -0.187 0.0685 0.0 0.0 0.0608
ENSG00000230896 AL604028.1 -107970 eQTL 3.56e-02 -0.163 0.0777 0.0 0.0 0.0608
ENSG00000232022 FAAHP1 -843024 eQTL 3.32e-02 -0.131 0.0614 0.0 0.0 0.0608
ENSG00000234329 AL604028.2 -62721 eQTL 2.19e-02 -0.117 0.051 0.0 0.0 0.0608
ENSG00000281912 LINC01144 285195 eQTL 2.70e-05 0.289 0.0686 0.0239 0.0228 0.0608


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 97942 9.14e-06 1.25e-05 1.56e-06 7.63e-06 2.39e-06 4.35e-06 1.19e-05 2.12e-06 1.02e-05 5.36e-06 1.36e-05 5.73e-06 1.81e-05 3.99e-06 4.13e-06 7.09e-06 5.34e-06 7.6e-06 2.72e-06 3.12e-06 5.46e-06 1.09e-05 9.94e-06 3.38e-06 1.53e-05 3.74e-06 6.66e-06 4.83e-06 1.23e-05 8.64e-06 6.53e-06 1.05e-06 1.15e-06 3.31e-06 4.87e-06 2.77e-06 1.76e-06 1.9e-06 1.79e-06 1.42e-06 9.82e-07 1.48e-05 1.48e-06 1.67e-07 8.47e-07 2.34e-06 1.82e-06 7.39e-07 5.4e-07
ENSG00000086015 MAST2 -197882 5.07e-06 7.87e-06 6.25e-07 3.85e-06 1.71e-06 1.51e-06 7.48e-06 1.1e-06 4.54e-06 2.81e-06 7.16e-06 3.37e-06 9.48e-06 2.13e-06 1.69e-06 4.19e-06 2.24e-06 3.85e-06 1.45e-06 2.51e-06 2.77e-06 6.84e-06 4.66e-06 1.94e-06 8.19e-06 1.93e-06 3.41e-06 1.75e-06 5.95e-06 5.02e-06 2.72e-06 5.23e-07 7.9e-07 1.83e-06 1.96e-06 1.33e-06 1.05e-06 5.43e-07 8.12e-07 9.64e-07 4.69e-07 8.15e-06 6.62e-07 1.64e-07 8.03e-07 1.57e-06 9.85e-07 6.92e-07 5.24e-07
ENSG00000117425 PTCH2 745852 1.17e-06 9.37e-07 1.5e-07 3.65e-07 2.66e-07 4.39e-07 7.99e-07 2.04e-07 8.36e-07 3.12e-07 1.07e-06 5.28e-07 1.48e-06 2.1e-07 4.26e-07 3.96e-07 5.92e-07 5.05e-07 4.06e-07 4.81e-07 2.54e-07 7.58e-07 6.33e-07 3.21e-07 1.47e-06 2.57e-07 6.38e-07 5.67e-07 7.61e-07 9.11e-07 4.54e-07 1.85e-07 1.82e-07 3.55e-07 3.24e-07 3.47e-07 5.22e-07 1.54e-07 1.6e-07 2.29e-07 1.67e-07 9.76e-07 5.77e-08 5.67e-08 1.69e-07 1.97e-07 1.62e-07 5.28e-08 1.12e-07
ENSG00000117448 AKR1A1 38562 1.77e-05 2.45e-05 3.83e-06 1.28e-05 3.23e-06 8.67e-06 2.99e-05 3.5e-06 1.97e-05 1.02e-05 2.68e-05 9.37e-06 3.72e-05 9.29e-06 5.8e-06 1.21e-05 1.04e-05 1.57e-05 5.87e-06 4.89e-06 9.31e-06 2.19e-05 2.15e-05 6.06e-06 3.04e-05 5.42e-06 9.03e-06 8.92e-06 2.28e-05 1.7e-05 1.3e-05 1.33e-06 1.88e-06 4.95e-06 8.27e-06 4.5e-06 1.86e-06 2.74e-06 3.21e-06 2.66e-06 1.14e-06 2.9e-05 2.66e-06 2.22e-07 1.85e-06 3.2e-06 3.46e-06 1.22e-06 1.32e-06
ENSG00000117481 NSUN4 -751072 1.13e-06 9.27e-07 1.48e-07 3.6e-07 2.71e-07 4.39e-07 7.96e-07 2.04e-07 8.32e-07 3.22e-07 1.09e-06 5.22e-07 1.49e-06 2.12e-07 4.4e-07 3.79e-07 5.64e-07 5.16e-07 3.95e-07 5.21e-07 2.62e-07 7.06e-07 6.26e-07 3.09e-07 1.46e-06 2.57e-07 6.23e-07 5.63e-07 7.45e-07 9.08e-07 4.48e-07 1.73e-07 1.81e-07 3.51e-07 3.29e-07 3.16e-07 5.17e-07 1.61e-07 1.41e-07 1.67e-07 1.45e-07 9.5e-07 5.73e-08 4.22e-08 1.74e-07 1.85e-07 1.67e-07 7e-08 1.11e-07
ENSG00000126088 UROD 578155 1.26e-06 1.07e-06 3.08e-07 1.16e-06 3.81e-07 6.02e-07 1.63e-06 3.49e-07 1.41e-06 4.24e-07 1.67e-06 6.02e-07 2.27e-06 3.03e-07 4.92e-07 7.95e-07 8e-07 6.45e-07 8.36e-07 1.05e-06 6.12e-07 1.63e-06 9.11e-07 6.37e-07 2.06e-06 3.17e-07 9.55e-07 9.43e-07 1.37e-06 1.29e-06 6.73e-07 2.45e-07 2.64e-07 6.89e-07 5.87e-07 4.45e-07 7.34e-07 3.63e-07 3.95e-07 2.01e-07 2.8e-07 1.49e-06 2.92e-07 1.32e-07 2.62e-07 3.3e-07 2.37e-07 2.1e-07 2.61e-07
ENSG00000132773 TOE1 249053 4.33e-06 5.24e-06 8.49e-07 3.2e-06 1.32e-06 1.68e-06 4.23e-06 9.52e-07 4.99e-06 2.08e-06 4.89e-06 3.46e-06 7.09e-06 2.39e-06 9.98e-07 3.58e-06 2e-06 2.72e-06 1.41e-06 1.6e-06 2.49e-06 4.86e-06 4.37e-06 1.56e-06 5.12e-06 1.21e-06 2.35e-06 1.81e-06 4.5e-06 4.17e-06 2.72e-06 4.2e-07 4.68e-07 1.87e-06 2.19e-06 9.89e-07 9.83e-07 4.57e-07 1.23e-06 6.99e-07 2.79e-07 5.62e-06 3.65e-07 1.82e-07 4.86e-07 9.43e-07 9.78e-07 7.5e-07 6.13e-07
ENSG00000132780 NASP 5259 4.47e-05 4.06e-05 6.99e-06 1.75e-05 7.36e-06 1.77e-05 5.44e-05 6.25e-06 4.13e-05 2.13e-05 5.1e-05 2.18e-05 6.43e-05 1.83e-05 8.96e-06 2.71e-05 2.17e-05 3.23e-05 1.04e-05 8.77e-06 2.09e-05 4.41e-05 3.71e-05 1.14e-05 5.65e-05 1.11e-05 1.99e-05 1.66e-05 4.02e-05 3.09e-05 2.64e-05 1.93e-06 3.49e-06 8.44e-06 1.36e-05 7.67e-06 3.81e-06 3.76e-06 6.34e-06 4.01e-06 1.83e-06 4.74e-05 4.47e-06 4.49e-07 3.14e-06 5.22e-06 5.11e-06 2.19e-06 1.51e-06
ENSG00000159588 CCDC17 -34952 1.95e-05 2.58e-05 4.17e-06 1.31e-05 3.44e-06 9.27e-06 3.18e-05 3.67e-06 2.05e-05 1.1e-05 2.86e-05 9.68e-06 3.85e-05 9.88e-06 5.99e-06 1.27e-05 1.1e-05 1.66e-05 6.06e-06 5.18e-06 9.65e-06 2.31e-05 2.29e-05 6.42e-06 3.21e-05 5.34e-06 9.65e-06 8.93e-06 2.39e-05 1.81e-05 1.36e-05 1.38e-06 1.96e-06 5.34e-06 8.6e-06 4.51e-06 2.05e-06 2.81e-06 3.2e-06 2.69e-06 1.21e-06 3.06e-05 2.68e-06 2.5e-07 1.9e-06 3.32e-06 3.33e-06 1.24e-06 1.38e-06
ENSG00000159592 GPBP1L1 -99008 9.21e-06 1.24e-05 1.58e-06 7.6e-06 2.36e-06 4.37e-06 1.19e-05 2.15e-06 1.03e-05 5.35e-06 1.33e-05 5.74e-06 1.8e-05 3.95e-06 4.14e-06 6.93e-06 5.17e-06 7.55e-06 2.64e-06 3.14e-06 5.26e-06 1.1e-05 9.89e-06 3.27e-06 1.52e-05 3.61e-06 6.59e-06 4.83e-06 1.21e-05 8.58e-06 6.4e-06 1.07e-06 1.1e-06 3.29e-06 4.81e-06 2.68e-06 1.78e-06 1.95e-06 1.72e-06 1.38e-06 9.74e-07 1.48e-05 1.49e-06 1.79e-07 7.98e-07 2.36e-06 1.82e-06 7.53e-07 5.41e-07
ENSG00000222009 BTBD19 780623 1.04e-06 8.81e-07 1.24e-07 3.43e-07 2.48e-07 4.06e-07 7.25e-07 1.78e-07 7.08e-07 3.04e-07 1.1e-06 5.01e-07 1.3e-06 1.97e-07 4.53e-07 3.35e-07 5.34e-07 4.52e-07 3.98e-07 5.97e-07 2.39e-07 5.86e-07 5.81e-07 2.92e-07 1.35e-06 2.74e-07 5.49e-07 5.29e-07 6.91e-07 8.59e-07 4.48e-07 1.55e-07 1.7e-07 2.98e-07 3.28e-07 3.1e-07 4.52e-07 1.36e-07 1.1e-07 9.13e-08 1.39e-07 8.03e-07 5.45e-08 4.13e-08 1.82e-07 1.23e-07 1.45e-07 8.25e-08 9.59e-08
ENSG00000230896 AL604028.1 -107970 8.57e-06 1.22e-05 1.26e-06 7.07e-06 2.36e-06 4.24e-06 1.14e-05 2.04e-06 9.91e-06 5.11e-06 1.23e-05 5.44e-06 1.62e-05 3.56e-06 3.87e-06 6.66e-06 4.74e-06 6.67e-06 2.66e-06 2.99e-06 5.06e-06 1.04e-05 9.02e-06 3.28e-06 1.34e-05 3.24e-06 6.02e-06 4.66e-06 1.1e-05 7.98e-06 5.69e-06 1.01e-06 1.17e-06 3.12e-06 4.55e-06 2.81e-06 1.72e-06 1.82e-06 1.63e-06 1.26e-06 8.79e-07 1.36e-05 1.43e-06 1.56e-07 7.89e-07 2.35e-06 1.7e-06 6.7e-07 4.9e-07
ENSG00000234329 AL604028.2 -62721 1.31e-05 1.71e-05 2.45e-06 9.98e-06 2.4e-06 6.2e-06 2.08e-05 2.48e-06 1.5e-05 7.28e-06 1.94e-05 7.03e-06 2.73e-05 6.06e-06 5.1e-06 9.51e-06 8.06e-06 1.12e-05 3.78e-06 4.17e-06 7.06e-06 1.52e-05 1.52e-05 4.69e-06 2.41e-05 4.58e-06 7.98e-06 6.67e-06 1.62e-05 1.25e-05 1.04e-05 9.65e-07 1.4e-06 3.85e-06 6.33e-06 3.8e-06 1.73e-06 2.38e-06 2.08e-06 2.05e-06 9.26e-07 2.05e-05 1.98e-06 1.76e-07 1.07e-06 2.74e-06 2.46e-06 7.99e-07 9.89e-07
ENSG00000281912 LINC01144 285195 4e-06 4.77e-06 6.05e-07 2.61e-06 1.06e-06 1.27e-06 2.92e-06 8.99e-07 3.19e-06 1.61e-06 4e-06 2.51e-06 6.75e-06 1.54e-06 1.33e-06 2.42e-06 1.82e-06 2.08e-06 1.45e-06 1.44e-06 1.73e-06 4.21e-06 3.31e-06 1.88e-06 4.61e-06 1.03e-06 2.55e-06 1.82e-06 4.15e-06 3.27e-06 2.04e-06 4.91e-07 7.92e-07 1.82e-06 1.94e-06 9.61e-07 9.06e-07 3.91e-07 1.31e-06 5.17e-07 2.4e-07 4.75e-06 4.01e-07 1.68e-07 4.33e-07 1.05e-06 7.59e-07 5.2e-07 4.68e-07