Genes within 1Mb (chr1:45570959:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -216028 eQTL 6.69e-19 0.378 0.0416 0.0 0.0 0.0515
ENSG00000117425 PTCH2 727706 eQTL 1.36e-02 0.128 0.052 0.0 0.0 0.0515
ENSG00000117448 AKR1A1 20416 eQTL 9.62e-03 -0.0643 0.0248 0.0 0.0 0.0515
ENSG00000117461 PIK3R3 -562077 eQTL 4.54e-02 -0.089 0.0444 0.0 0.0 0.0515
ENSG00000126088 UROD 560009 pQTL 1.71e-04 0.123 0.0327 0.0 0.0 0.0509
ENSG00000126088 UROD 560009 eQTL 9.09e-03 0.119 0.0457 0.0 0.0 0.0515
ENSG00000126106 TMEM53 896478 eQTL 4.64e-02 0.113 0.0568 0.0 0.0 0.0515
ENSG00000132773 TOE1 230907 eQTL 1.60e-02 -0.0703 0.0291 0.0 0.0 0.0515
ENSG00000132780 NASP -12887 eQTL 1.09e-10 -0.227 0.0348 0.00141 0.00141 0.0515
ENSG00000159588 CCDC17 -53098 eQTL 7.71e-24 -0.307 0.0297 0.0 0.0 0.0515
ENSG00000159592 GPBP1L1 -117154 eQTL 5.12e-03 0.0659 0.0235 0.0 0.0 0.0515
ENSG00000162415 ZSWIM5 264750 eQTL 1.95e-02 -0.108 0.0461 0.0 0.0 0.0515
ENSG00000197429 IPP -179691 eQTL 1.37e-02 -0.11 0.0446 0.0 0.0 0.0515
ENSG00000222009 BTBD19 762477 eQTL 3.39e-05 -0.134 0.0321 0.0 0.0 0.0515
ENSG00000225447 RPS15AP10 -75238 eQTL 2.76e-02 -0.162 0.0735 0.0 0.0 0.0515
ENSG00000232022 FAAHP1 -861170 eQTL 7.03e-03 -0.177 0.0657 0.0 0.0 0.0515
ENSG00000234329 AL604028.2 -80867 eQTL 1.65e-03 -0.172 0.0545 0.0 0.0 0.0515
ENSG00000281912 LINC01144 267049 eQTL 1.46e-04 0.281 0.0736 0.00162 0.00217 0.0515


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -216028 8.43e-07 9.03e-07 2.01e-07 9.69e-07 2.1e-07 3.41e-07 6.72e-07 2.62e-07 6.03e-07 2.88e-07 1.1e-06 4.31e-07 1.05e-06 1.59e-07 4.6e-07 2.84e-07 6.15e-07 4.16e-07 4.49e-07 5.57e-07 2.38e-07 5.37e-07 5.41e-07 3.56e-07 1.38e-06 2.49e-07 6.21e-07 3.95e-07 4.39e-07 8.38e-07 3.95e-07 6.49e-08 4.57e-08 1.69e-07 4.07e-07 4.6e-07 3.64e-07 1.08e-07 8.61e-08 4.09e-08 4.4e-08 9.49e-07 4.53e-08 1.22e-08 3.14e-07 2.64e-08 9.73e-08 7.81e-08 8.28e-08
ENSG00000117425 PTCH2 727706 2.6e-07 1.06e-07 3.39e-08 1.82e-07 9.65e-08 9.13e-08 1.39e-07 5.21e-08 1.36e-07 4.23e-08 1.63e-07 7.6e-08 1.21e-07 6.07e-08 5.44e-08 7.87e-08 5.1e-08 1.06e-07 5.2e-08 3.59e-08 1.06e-07 1.31e-07 1.31e-07 4.82e-08 1.32e-07 1.09e-07 1.1e-07 8.71e-08 1.05e-07 1.09e-07 9.5e-08 3.88e-08 2.74e-08 8.02e-08 9.24e-08 3.97e-08 4.79e-08 9.06e-08 8.55e-08 3.03e-08 3.44e-08 1.39e-07 3.91e-08 1.7e-08 5.7e-08 1.78e-08 1.44e-07 4.2e-09 4.85e-08
ENSG00000117448 AKR1A1 20416 2.81e-05 3.25e-05 5.92e-06 1.59e-05 5.25e-06 1.32e-05 3.97e-05 4.24e-06 2.89e-05 1.45e-05 3.69e-05 1.47e-05 4.7e-05 1.24e-05 6.33e-06 1.73e-05 1.5e-05 2.21e-05 7.83e-06 6.6e-06 1.35e-05 2.88e-05 2.86e-05 8.57e-06 4.01e-05 6.66e-06 1.35e-05 1.19e-05 3.05e-05 2.37e-05 1.87e-05 1.58e-06 2.38e-06 6.79e-06 1.1e-05 5.77e-06 2.82e-06 3.16e-06 4.16e-06 3.2e-06 1.63e-06 3.61e-05 2.8e-06 3.62e-07 2.1e-06 3.59e-06 3.88e-06 1.45e-06 1.56e-06
ENSG00000126088 UROD 560009 2.66e-07 1.11e-07 3.65e-08 1.82e-07 8.92e-08 9.32e-08 1.42e-07 5.49e-08 1.42e-07 4.24e-08 1.59e-07 8.02e-08 1.27e-07 6.21e-08 6e-08 8.01e-08 4.63e-08 1.1e-07 5.21e-08 4.03e-08 1.04e-07 1.3e-07 1.3e-07 4.26e-08 1.29e-07 1.13e-07 1.12e-07 8.71e-08 9.97e-08 1.09e-07 9.58e-08 3.89e-08 2.74e-08 8.21e-08 8.94e-08 3.65e-08 5.05e-08 9.25e-08 8.3e-08 3.37e-08 3.61e-08 1.36e-07 3.98e-08 1.35e-08 3.41e-08 1.72e-08 1.3e-07 3.92e-09 5.04e-08
ENSG00000132780 NASP -12887 3.81e-05 3.82e-05 6.85e-06 1.69e-05 6.92e-06 1.65e-05 4.88e-05 5.07e-06 3.72e-05 1.77e-05 4.55e-05 1.95e-05 5.6e-05 1.54e-05 7.83e-06 2.42e-05 2.01e-05 2.79e-05 9.5e-06 7.67e-06 1.81e-05 3.87e-05 3.51e-05 1.03e-05 4.95e-05 8.49e-06 1.71e-05 1.55e-05 3.65e-05 2.9e-05 2.38e-05 1.65e-06 2.83e-06 7.8e-06 1.25e-05 6.81e-06 3.49e-06 3.44e-06 5.37e-06 3.6e-06 1.66e-06 4.29e-05 3.64e-06 4.43e-07 2.59e-06 4.6e-06 4.54e-06 1.76e-06 1.52e-06
ENSG00000159588 CCDC17 -53098 9.86e-06 1.26e-05 2.47e-06 8.45e-06 2.35e-06 4.65e-06 1.2e-05 2.16e-06 1.06e-05 5.93e-06 1.41e-05 5.85e-06 1.85e-05 3.61e-06 3.46e-06 6.63e-06 4.55e-06 7.71e-06 3.62e-06 3.53e-06 6.27e-06 1.05e-05 9.89e-06 3.52e-06 1.72e-05 3.52e-06 7.15e-06 4.78e-06 1.21e-05 9.37e-06 7.01e-06 1.05e-06 1.13e-06 3.54e-06 5.76e-06 2.85e-06 1.89e-06 2e-06 1.64e-06 1.01e-06 8.4e-07 1.43e-05 1.39e-06 1.66e-07 9.54e-07 1.75e-06 1.8e-06 6.16e-07 5.68e-07
ENSG00000159592 GPBP1L1 -117154 2.66e-06 4.1e-06 6.95e-07 2.64e-06 9.03e-07 7.75e-07 2.43e-06 9.87e-07 2.33e-06 1.46e-06 3.36e-06 1.49e-06 4.9e-06 1.42e-06 9.69e-07 1.77e-06 1.45e-06 2.3e-06 1.44e-06 1e-06 1.39e-06 3.19e-06 3.2e-06 1.6e-06 4.03e-06 1.2e-06 2.25e-06 1.75e-06 2.56e-06 2.49e-06 1.91e-06 4.15e-07 6.13e-07 1.29e-06 1.93e-06 9.43e-07 9.39e-07 4.24e-07 1.11e-06 3.46e-07 3.53e-07 3.99e-06 6.14e-07 1.99e-07 6.11e-07 3.58e-07 4.94e-07 4.41e-07 3.24e-07
ENSG00000222009 BTBD19 762477 2.6e-07 1.06e-07 3.39e-08 1.79e-07 9.91e-08 9.13e-08 1.36e-07 5.21e-08 1.36e-07 4.23e-08 1.63e-07 7.6e-08 1.21e-07 6.07e-08 5.44e-08 7.87e-08 5.1e-08 1.06e-07 5.2e-08 3.59e-08 1.06e-07 1.31e-07 1.31e-07 4.98e-08 1.33e-07 1.09e-07 1.13e-07 8.45e-08 1.05e-07 1.1e-07 9.5e-08 3.95e-08 2.74e-08 8.26e-08 9.02e-08 3.99e-08 4.63e-08 9.06e-08 8.22e-08 3.05e-08 3.55e-08 1.39e-07 3.91e-08 2.02e-08 5.75e-08 1.78e-08 1.44e-07 4.26e-09 4.74e-08
ENSG00000234329 AL604028.2 -80867 4.99e-06 7.87e-06 1.01e-06 4.35e-06 1.73e-06 1.59e-06 8.04e-06 1.29e-06 4.81e-06 4.05e-06 8.17e-06 2.94e-06 1.01e-05 2.13e-06 9.88e-07 3.82e-06 1.87e-06 3.99e-06 2.18e-06 2.63e-06 2.77e-06 6.28e-06 4.8e-06 1.95e-06 8.96e-06 1.95e-06 4.07e-06 1.73e-06 5.45e-06 6.28e-06 3.42e-06 4.9e-07 7.24e-07 2.22e-06 2.92e-06 2.06e-06 1.14e-06 4.74e-07 9.23e-07 6.24e-07 2.78e-07 8.48e-06 5.96e-07 1.6e-07 6.91e-07 9.94e-07 1.13e-06 7.11e-07 5.6e-07
ENSG00000281912 LINC01144 267049 3.62e-07 5.6e-07 8.9e-08 3.68e-07 9.86e-08 1.57e-07 4.09e-07 1.01e-07 2.35e-07 1.39e-07 5.29e-07 1.91e-07 4.34e-07 9.18e-08 2.18e-07 1.17e-07 1.73e-07 2.83e-07 2.25e-07 1.55e-07 1.8e-07 2.48e-07 2.81e-07 1.25e-07 4.54e-07 1.71e-07 2.72e-07 1.88e-07 1.58e-07 2.97e-07 1.88e-07 4.58e-08 4.96e-08 1.17e-07 3.55e-07 1.8e-07 8.28e-08 5.25e-08 6.08e-08 2.62e-08 6.21e-08 3.43e-07 3.37e-08 1.93e-08 1.81e-07 8.76e-09 7.92e-08 2.38e-08 5.19e-08