Genes within 1Mb (chr1:45568802:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 77639 eQTL 1.41e-02 0.0756 0.0307 0.0 0.0 0.0608
ENSG00000086015 MAST2 -218185 eQTL 5.50e-18 0.345 0.0391 0.0 0.0 0.0608
ENSG00000117425 PTCH2 725549 eQTL 3.19e-02 0.105 0.0487 0.0 0.0 0.0608
ENSG00000117448 AKR1A1 18259 eQTL 4.04e-05 -0.0952 0.0231 0.00244 0.00595 0.0608
ENSG00000117480 FAAH -825515 eQTL 6.80e-03 0.118 0.0436 0.0 0.0 0.0608
ENSG00000117481 NSUN4 -771375 eQTL 1.36e-03 0.161 0.05 0.0 0.0 0.0608
ENSG00000126088 UROD 557852 pQTL 5.95e-03 0.0831 0.0302 0.0 0.0 0.0607
ENSG00000126106 TMEM53 894321 eQTL 3.62e-02 0.112 0.0532 0.0 0.0 0.0608
ENSG00000132773 TOE1 228750 eQTL 5.95e-03 -0.0751 0.0273 0.0 0.0 0.0608
ENSG00000132780 NASP -15044 eQTL 3.13e-10 -0.207 0.0326 0.0 0.0 0.0608
ENSG00000159588 CCDC17 -55255 eQTL 6.56e-33 -0.338 0.0272 0.013 0.0123 0.0608
ENSG00000159592 GPBP1L1 -119311 eQTL 7.82e-03 0.0586 0.022 0.0 0.0 0.0608
ENSG00000162415 ZSWIM5 262593 eQTL 4.94e-02 -0.085 0.0432 0.0 0.0 0.0608
ENSG00000197429 IPP -181848 eQTL 5.41e-03 -0.116 0.0418 0.0 0.0 0.0608
ENSG00000222009 BTBD19 760320 eQTL 1.37e-03 -0.097 0.0302 0.0 0.0 0.0608
ENSG00000225447 RPS15AP10 -77395 eQTL 5.51e-03 -0.191 0.0687 0.0 0.0 0.0608
ENSG00000230896 AL604028.1 -128273 eQTL 3.39e-02 -0.165 0.0779 0.0 0.0 0.0608
ENSG00000232022 FAAHP1 -863327 eQTL 3.87e-02 -0.128 0.0616 0.0 0.0 0.0608
ENSG00000234329 AL604028.2 -83024 eQTL 2.55e-02 -0.114 0.0511 0.0 0.0 0.0608
ENSG00000281912 LINC01144 264892 eQTL 1.51e-05 0.299 0.0688 0.0497 0.047 0.0608


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 77639 6.93e-06 9.03e-06 1.33e-06 4.02e-06 1.96e-06 2.6e-06 9.17e-06 1.71e-06 5.68e-06 4.29e-06 9.01e-06 4.74e-06 1.13e-05 3.9e-06 1.55e-06 5.82e-06 3.71e-06 4.73e-06 1.9e-06 2.15e-06 3.4e-06 7.74e-06 5.93e-06 2.3e-06 1.19e-05 2.97e-06 4.35e-06 2.34e-06 6.95e-06 7.44e-06 4.16e-06 5.74e-07 8.1e-07 2.73e-06 3.69e-06 2.1e-06 1.33e-06 1.14e-06 1.32e-06 7.19e-07 8.99e-07 9.58e-06 1.3e-06 1.66e-07 6.86e-07 1.04e-06 1.16e-06 6.85e-07 4.44e-07
ENSG00000086015 MAST2 -218185 1.89e-06 2.12e-06 3.09e-07 1.36e-06 3.95e-07 6.64e-07 1.25e-06 3.83e-07 1.72e-06 7.25e-07 2.01e-06 1.29e-06 2.84e-06 7.09e-07 4.14e-07 1.04e-06 1.02e-06 1.21e-06 5.84e-07 5.9e-07 7.33e-07 2e-06 1.38e-06 8.07e-07 2.67e-06 9.68e-07 1.04e-06 8.36e-07 1.7e-06 1.29e-06 7.56e-07 2.43e-07 3.27e-07 6.66e-07 9.55e-07 6.39e-07 7.06e-07 3.5e-07 5.12e-07 2.8e-07 2.74e-07 2.32e-06 4.26e-07 1.31e-07 3.91e-07 3.19e-07 4.11e-07 1.83e-07 2.47e-07
ENSG00000117425 PTCH2 725549 2.95e-07 1.34e-07 6.04e-08 2.01e-07 9.25e-08 8.45e-08 1.67e-07 5.53e-08 1.45e-07 5.67e-08 1.52e-07 1.05e-07 1.71e-07 7.64e-08 6.18e-08 7.5e-08 4.09e-08 1.4e-07 6.07e-08 4.78e-08 1.22e-07 1.24e-07 1.45e-07 3.17e-08 1.65e-07 1.26e-07 1.1e-07 9.74e-08 1.2e-07 1.05e-07 1.02e-07 2.93e-08 3.43e-08 8.89e-08 3.51e-08 2.95e-08 5.65e-08 8.71e-08 6.43e-08 3.86e-08 5.48e-08 1.46e-07 5.27e-08 1.23e-08 3.41e-08 1.92e-08 1.15e-07 2.1e-09 4.8e-08
ENSG00000117448 AKR1A1 18259 2.59e-05 2.67e-05 4.95e-06 1.32e-05 5.01e-06 1.13e-05 3.35e-05 4.24e-06 2.4e-05 1.23e-05 3.16e-05 1.44e-05 3.92e-05 1.16e-05 5.99e-06 1.54e-05 1.4e-05 2.11e-05 6.6e-06 5.4e-06 1.19e-05 2.57e-05 2.57e-05 7.63e-06 3.79e-05 6.74e-06 1.12e-05 1e-05 2.52e-05 2.06e-05 1.61e-05 1.55e-06 2.25e-06 6.29e-06 1.05e-05 4.81e-06 2.77e-06 2.99e-06 4e-06 2.85e-06 1.7e-06 3.25e-05 2.98e-06 3.62e-07 2.12e-06 3.34e-06 3.75e-06 1.55e-06 1.51e-06
ENSG00000117481 NSUN4 -771375 2.77e-07 1.3e-07 5.64e-08 1.9e-07 9.21e-08 9.91e-08 1.61e-07 5.43e-08 1.45e-07 5.42e-08 1.54e-07 9e-08 1.59e-07 7.37e-08 5.91e-08 7.36e-08 3.93e-08 1.33e-07 5.75e-08 4.23e-08 1.19e-07 1.27e-07 1.44e-07 2.91e-08 1.55e-07 1.21e-07 1.07e-07 9.61e-08 1.12e-07 1.03e-07 9.7e-08 3.26e-08 3.96e-08 8.56e-08 3.4e-08 3.14e-08 5.45e-08 9.36e-08 6.63e-08 3.87e-08 5.34e-08 1.36e-07 5.2e-08 1.49e-08 3.42e-08 1.86e-08 1.21e-07 1.98e-09 5e-08
ENSG00000126088 UROD 557852 4.89e-07 1.83e-07 8.55e-08 2.49e-07 9.94e-08 1.13e-07 2.86e-07 6.2e-08 1.85e-07 1.11e-07 1.96e-07 1.57e-07 3.6e-07 8.42e-08 6.6e-08 1.01e-07 5.27e-08 2.33e-07 7.27e-08 6.58e-08 1.27e-07 1.81e-07 1.75e-07 4.34e-08 2.86e-07 1.71e-07 1.29e-07 1.36e-07 1.37e-07 1.39e-07 1.27e-07 5.01e-08 4.74e-08 9.09e-08 1.67e-07 4.95e-08 5.54e-08 7.25e-08 5.69e-08 6.19e-08 3.2e-08 1.63e-07 3.65e-08 7.26e-09 5.32e-08 9.86e-09 9.23e-08 3.25e-09 4.68e-08
ENSG00000132773 TOE1 228750 1.64e-06 1.53e-06 2.31e-07 1.25e-06 3.67e-07 6.68e-07 1.41e-06 4.13e-07 1.74e-06 6.9e-07 2.05e-06 1.28e-06 2.64e-06 5.23e-07 4.92e-07 9.68e-07 9.75e-07 1.13e-06 7.08e-07 4.58e-07 7.86e-07 1.91e-06 1.13e-06 6.61e-07 2.41e-06 8.9e-07 9.78e-07 8.98e-07 1.62e-06 1.31e-06 8.35e-07 2.62e-07 2.82e-07 5.79e-07 9.18e-07 5.42e-07 7.42e-07 2.97e-07 5.05e-07 2.97e-07 3.02e-07 2.04e-06 3.52e-07 1.3e-07 3.75e-07 2.3e-07 3.7e-07 2.45e-07 2.83e-07
ENSG00000132780 NASP -15044 2.93e-05 2.87e-05 5.6e-06 1.41e-05 5.54e-06 1.28e-05 3.78e-05 4.49e-06 2.7e-05 1.38e-05 3.44e-05 1.59e-05 4.26e-05 1.27e-05 6.27e-06 1.72e-05 1.55e-05 2.29e-05 7.36e-06 6.02e-06 1.35e-05 2.86e-05 2.82e-05 8.4e-06 4.09e-05 7.46e-06 1.25e-05 1.14e-05 2.78e-05 2.23e-05 1.78e-05 1.63e-06 2.42e-06 6.71e-06 1.12e-05 5.31e-06 2.98e-06 3.13e-06 4.35e-06 3.14e-06 1.72e-06 3.51e-05 3.39e-06 3.73e-07 2.3e-06 3.59e-06 4.06e-06 1.6e-06 1.57e-06
ENSG00000159588 CCDC17 -55255 9.67e-06 1.09e-05 1.93e-06 5.82e-06 2.58e-06 4.23e-06 1.08e-05 2.21e-06 9.83e-06 5.34e-06 1.28e-05 6.11e-06 1.6e-05 3.88e-06 2.89e-06 6.87e-06 4.79e-06 8.09e-06 2.64e-06 2.83e-06 5.45e-06 9.86e-06 9.02e-06 3.27e-06 1.73e-05 4.3e-06 5.98e-06 4.06e-06 1.02e-05 8.32e-06 6.33e-06 1.05e-06 1.27e-06 3.29e-06 5.39e-06 2.59e-06 1.87e-06 1.91e-06 2.18e-06 1.03e-06 9.91e-07 1.36e-05 1.64e-06 1.97e-07 7.68e-07 1.74e-06 1.74e-06 7.23e-07 4.53e-07
ENSG00000159592 GPBP1L1 -119311 4.54e-06 4.98e-06 6.65e-07 2.73e-06 1.32e-06 1.57e-06 4.13e-06 1.04e-06 4.88e-06 2.41e-06 4.99e-06 3.34e-06 7.12e-06 2.11e-06 1.41e-06 3.83e-06 2.06e-06 3.39e-06 1.31e-06 1.02e-06 2.77e-06 4.53e-06 3.84e-06 1.39e-06 7.08e-06 2.02e-06 2.47e-06 1.78e-06 4.19e-06 4.04e-06 2.73e-06 4.91e-07 7.92e-07 1.52e-06 2.07e-06 9.53e-07 9.46e-07 4.42e-07 9.86e-07 3.99e-07 5.82e-07 5.65e-06 3.83e-07 1.79e-07 5.95e-07 6.92e-07 1.13e-06 7.24e-07 4.53e-07
ENSG00000222009 BTBD19 760320 2.77e-07 1.27e-07 5.72e-08 1.9e-07 9.16e-08 9.48e-08 1.61e-07 5.43e-08 1.45e-07 5.42e-08 1.54e-07 9.19e-08 1.59e-07 7.37e-08 5.91e-08 7.49e-08 3.93e-08 1.33e-07 5.97e-08 4.31e-08 1.19e-07 1.27e-07 1.44e-07 2.79e-08 1.55e-07 1.25e-07 1.07e-07 9.61e-08 1.12e-07 1.07e-07 9.92e-08 3.06e-08 3.96e-08 8.72e-08 3.02e-08 2.99e-08 5.3e-08 9.23e-08 6.86e-08 3.71e-08 5.44e-08 1.33e-07 5.21e-08 1.34e-08 3.4e-08 1.87e-08 1.2e-07 2e-09 5e-08
ENSG00000230896 AL604028.1 -128273 4.33e-06 4.74e-06 7.1e-07 2.43e-06 1.12e-06 1.27e-06 3.15e-06 9.97e-07 3.9e-06 2.17e-06 4.29e-06 3.31e-06 7.67e-06 2.33e-06 1.26e-06 3.26e-06 1.92e-06 2.96e-06 1.45e-06 9.69e-07 2.28e-06 4.19e-06 3.38e-06 1.55e-06 5.85e-06 1.72e-06 2.68e-06 1.48e-06 4.09e-06 3.6e-06 2.51e-06 5.76e-07 8.14e-07 1.88e-06 2.03e-06 9.06e-07 9.59e-07 4.93e-07 1.1e-06 3.27e-07 4.72e-07 5.47e-06 3.83e-07 1.78e-07 4.38e-07 4.13e-07 1.01e-06 6.71e-07 3.6e-07
ENSG00000234329 AL604028.2 -83024 6.2e-06 8.04e-06 1.24e-06 3.88e-06 1.9e-06 2.14e-06 8.7e-06 1.49e-06 5.07e-06 4.05e-06 8.9e-06 4.35e-06 1.12e-05 3.5e-06 1.18e-06 5.5e-06 3.28e-06 3.89e-06 1.63e-06 1.79e-06 3.16e-06 7.3e-06 5.57e-06 1.95e-06 1.09e-05 2.75e-06 3.87e-06 1.97e-06 6.53e-06 6.62e-06 3.97e-06 5.55e-07 7.75e-07 2.58e-06 3.53e-06 1.73e-06 1.27e-06 8.97e-07 1.41e-06 5.94e-07 8.23e-07 8.47e-06 1.03e-06 1.58e-07 7.18e-07 8.05e-07 8.9e-07 7.8e-07 5.39e-07
ENSG00000281912 LINC01144 264892 1.31e-06 1.01e-06 2.29e-07 1.19e-06 2.95e-07 6.22e-07 1.6e-06 3.82e-07 1.44e-06 5.15e-07 1.79e-06 7.63e-07 2.5e-06 2.77e-07 5.23e-07 9.27e-07 8.54e-07 7.36e-07 7.7e-07 6.56e-07 6.36e-07 1.45e-06 8.59e-07 5.43e-07 2.25e-06 6.57e-07 9.13e-07 6.93e-07 1.32e-06 1.32e-06 6.78e-07 2.05e-07 1.89e-07 6.61e-07 6.12e-07 4.77e-07 6.37e-07 2.31e-07 4.2e-07 2.42e-07 2.71e-07 1.65e-06 1.39e-07 5.71e-08 3.1e-07 1.2e-07 2.43e-07 2.54e-07 1.98e-07