Genes within 1Mb (chr1:45528294:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 37131 eQTL 6.10e-02 -0.0484 0.0258 0.00115 0.0 0.0873
ENSG00000085999 RAD54L -719394 eQTL 2.79e-02 0.075 0.0341 0.0 0.0 0.0873
ENSG00000086015 MAST2 -258693 eQTL 1.40e-05 -0.147 0.0338 0.0 0.0 0.0873
ENSG00000117425 PTCH2 685041 eQTL 2.55e-02 -0.0914 0.0409 0.0 0.0 0.0873
ENSG00000117450 PRDX1 5247 eQTL 6.34e-04 -0.0681 0.0199 0.0 0.0 0.0873
ENSG00000117461 PIK3R3 -604742 eQTL 2.94e-02 0.0761 0.0349 0.0 0.0 0.0873
ENSG00000126088 UROD 517344 pQTL 3.42e-04 -0.0946 0.0264 0.0 0.0 0.0816
ENSG00000126088 UROD 517344 eQTL 4.63e-02 -0.0717 0.0359 0.0 0.0 0.0873
ENSG00000132763 MMACHC 27994 eQTL 2.98e-03 -0.157 0.0526 0.0 0.0 0.0873
ENSG00000132773 TOE1 188242 eQTL 1.32e-02 0.0568 0.0229 0.0 0.0 0.0873
ENSG00000132780 NASP -55552 eQTL 5.49e-04 0.0962 0.0278 0.0 0.0 0.0873
ENSG00000159588 CCDC17 -95763 eQTL 1.29e-11 0.164 0.024 0.0 0.0 0.0873
ENSG00000159596 TMEM69 -159887 eQTL 3.39e-04 0.136 0.0378 0.0 0.0 0.0873
ENSG00000197429 IPP -222356 eQTL 5.67e-03 0.0971 0.035 0.0 0.0 0.0873
ENSG00000222009 BTBD19 719812 eQTL 1.89e-05 0.109 0.0252 0.0 0.0 0.0873
ENSG00000225721 AL592166.1 752484 eQTL 1.26e-03 -0.199 0.0616 0.0 0.0 0.0873
ENSG00000280670 CCDC163 28215 eQTL 7.97e-66 -1.02 0.0551 0.0 0.0 0.0873


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 37131 1.53e-05 2.37e-05 3.05e-06 1.24e-05 2.45e-06 7.78e-06 2.24e-05 3.41e-06 1.9e-05 8.5e-06 2.29e-05 8.69e-06 3.48e-05 8.66e-06 4.78e-06 9.88e-06 1.02e-05 1.51e-05 4.64e-06 4.62e-06 8.04e-06 1.84e-05 1.66e-05 4.81e-06 2.84e-05 5.33e-06 8.02e-06 7.75e-06 1.77e-05 1.63e-05 1.24e-05 1.25e-06 1.55e-06 4.39e-06 8.57e-06 3.76e-06 1.95e-06 2.48e-06 3.34e-06 2.18e-06 1.12e-06 2.49e-05 2.71e-06 2.52e-07 9.48e-07 2.45e-06 2.51e-06 8.55e-07 8.01e-07
ENSG00000086015 MAST2 -258693 2.16e-06 2.98e-06 3.29e-07 2.05e-06 4.9e-07 8.2e-07 1.8e-06 4.75e-07 2.02e-06 9.51e-07 2.38e-06 1.26e-06 3.83e-06 1.41e-06 4.72e-07 1.7e-06 1.28e-06 2.12e-06 1.49e-06 1.15e-06 1.14e-06 3.21e-06 2.13e-06 9.91e-07 4.15e-06 1.22e-06 1.23e-06 1.79e-06 1.98e-06 2.28e-06 1.86e-06 3.05e-07 5.2e-07 1.22e-06 1.27e-06 8.73e-07 7.94e-07 4.13e-07 9.37e-07 3.96e-07 3.56e-07 4.29e-06 6.49e-07 1.81e-07 2.96e-07 3.66e-07 4.95e-07 2.2e-07 1.54e-07
ENSG00000117425 PTCH2 685041 5.59e-07 3.55e-07 7.76e-08 3.57e-07 1.1e-07 1.44e-07 4.05e-07 5.84e-08 2.78e-07 1.5e-07 3.32e-07 1.86e-07 5.54e-07 1.07e-07 7.98e-08 1.53e-07 9.3e-08 2.87e-07 1.93e-07 8.11e-08 1.87e-07 2.99e-07 2.67e-07 7.36e-08 6.18e-07 1.94e-07 1.74e-07 1.88e-07 2.31e-07 3.8e-07 1.93e-07 7.71e-08 5.51e-08 1.23e-07 1.95e-07 6.33e-08 1.05e-07 7.75e-08 5.77e-08 5.88e-08 3.17e-08 6.8e-07 4.18e-08 5.7e-08 3.48e-08 1.35e-08 1.04e-07 7.14e-09 6.15e-08
ENSG00000117450 PRDX1 5247 3.54e-05 3.29e-05 6.49e-06 1.59e-05 6.08e-06 1.46e-05 4.59e-05 4.65e-06 3.18e-05 1.56e-05 3.84e-05 1.79e-05 4.89e-05 1.43e-05 7.12e-06 1.94e-05 1.83e-05 2.59e-05 8.23e-06 7.2e-06 1.6e-05 3.41e-05 3.27e-05 9.89e-06 4.56e-05 8.28e-06 1.46e-05 1.29e-05 3.31e-05 2.9e-05 2.03e-05 1.63e-06 2.8e-06 7.77e-06 1.23e-05 6.19e-06 3.43e-06 3.25e-06 5.18e-06 3.56e-06 1.7e-06 3.81e-05 3.68e-06 4.09e-07 2.67e-06 4.06e-06 4.11e-06 1.73e-06 1.5e-06
ENSG00000132773 TOE1 188242 4.35e-06 5.05e-06 8.29e-07 2.89e-06 7.76e-07 1.35e-06 3.33e-06 8.89e-07 5.06e-06 2.17e-06 4.69e-06 3.41e-06 7.37e-06 2.22e-06 1.05e-06 3.34e-06 1.78e-06 2.79e-06 1.57e-06 9.49e-07 2.63e-06 4.9e-06 3.43e-06 1.84e-06 6.48e-06 1.33e-06 2.45e-06 1.77e-06 4.32e-06 4.14e-06 2.72e-06 5.42e-07 7.32e-07 1.8e-06 2.15e-06 9.08e-07 9.42e-07 4.76e-07 1.07e-06 3.57e-07 1.96e-07 6.85e-06 4.2e-07 1.53e-07 3.62e-07 6.22e-07 6.79e-07 2.41e-07 3.41e-07
ENSG00000132780 NASP -55552 1.21e-05 1.76e-05 2.58e-06 9.42e-06 2.36e-06 5.89e-06 1.56e-05 2.39e-06 1.53e-05 6.37e-06 1.79e-05 6.87e-06 2.69e-05 5.8e-06 3.67e-06 8.18e-06 8.25e-06 1.12e-05 3.54e-06 3.76e-06 6.47e-06 1.35e-05 1.13e-05 3.39e-06 2.29e-05 4.33e-06 7.48e-06 6.04e-06 1.41e-05 1.21e-05 9.19e-06 1.01e-06 1.33e-06 3.69e-06 6.48e-06 2.82e-06 1.74e-06 2e-06 2.49e-06 1.56e-06 1.01e-06 1.89e-05 2.06e-06 1.88e-07 7.07e-07 1.85e-06 1.74e-06 8.16e-07 4.51e-07
ENSG00000159588 CCDC17 -95763 7.83e-06 1.18e-05 1.21e-06 6.02e-06 1.88e-06 3.88e-06 9.78e-06 1.75e-06 9.65e-06 4.99e-06 1.19e-05 5.16e-06 1.58e-05 3.63e-06 1.81e-06 6.66e-06 4.74e-06 6.43e-06 2.66e-06 2.91e-06 4.7e-06 9.68e-06 6.78e-06 2.41e-06 1.31e-05 2.91e-06 4.85e-06 4.08e-06 8.33e-06 7.95e-06 5.38e-06 9.55e-07 1.29e-06 2.83e-06 4.6e-06 2.09e-06 1.65e-06 1.84e-06 1.76e-06 1e-06 7.1e-07 1.3e-05 1.4e-06 1.79e-07 5.92e-07 1.42e-06 9.43e-07 6.45e-07 5.08e-07
ENSG00000159592 \N -159819 4.46e-06 6.26e-06 7.29e-07 3.52e-06 1.27e-06 1.6e-06 5.25e-06 1.04e-06 4.71e-06 2.95e-06 6.38e-06 3.28e-06 9.39e-06 2.09e-06 1.35e-06 4.09e-06 2.6e-06 3.79e-06 1.55e-06 1.28e-06 2.77e-06 6.14e-06 4.55e-06 1.4e-06 8.48e-06 1.87e-06 2.31e-06 1.78e-06 4.46e-06 5.03e-06 2.62e-06 3.85e-07 5.37e-07 1.57e-06 2.07e-06 1.11e-06 1.08e-06 4.57e-07 8.1e-07 5.97e-07 2.79e-07 8.25e-06 6.14e-07 1.59e-07 3.06e-07 1.34e-06 9.94e-07 4.27e-07 4.23e-07
ENSG00000173660 \N -775404 3.77e-07 2.5e-07 6.45e-08 2.48e-07 9.82e-08 1.03e-07 2.95e-07 5.62e-08 2.12e-07 1.11e-07 2.18e-07 1.37e-07 3.77e-07 8.55e-08 5.97e-08 1.1e-07 5.57e-08 2.21e-07 1.27e-07 8.69e-08 1.6e-07 2.24e-07 2e-07 3.41e-08 3.7e-07 1.56e-07 1.29e-07 1.52e-07 1.47e-07 2.01e-07 1.43e-07 5.22e-08 5.41e-08 1.15e-07 8.75e-08 4.95e-08 9.11e-08 5.8e-08 4.9e-08 7.9e-08 5.04e-08 4.35e-07 1.65e-08 2.63e-08 2.82e-08 1.78e-08 8.21e-08 2.75e-09 5.15e-08
ENSG00000225721 AL592166.1 752484 3.92e-07 2.67e-07 7e-08 2.61e-07 9.94e-08 1.13e-07 3.25e-07 5.68e-08 2.35e-07 1.15e-07 2.38e-07 1.48e-07 4.05e-07 9.15e-08 6.27e-08 1.14e-07 6.17e-08 2.33e-07 1.51e-07 8.1e-08 1.57e-07 2.3e-07 2.11e-07 4.25e-08 4.27e-07 1.71e-07 1.33e-07 1.61e-07 1.6e-07 2.26e-07 1.59e-07 5.54e-08 5.75e-08 1.21e-07 1.16e-07 5.23e-08 1.01e-07 6.2e-08 4.82e-08 7.53e-08 4.89e-08 4.82e-07 2.63e-08 3.36e-08 3.07e-08 1.88e-08 9.1e-08 2.89e-09 5.43e-08
ENSG00000280670 CCDC163 28215 1.92e-05 2.73e-05 4.31e-06 1.35e-05 3.15e-06 9.46e-06 2.67e-05 3.5e-06 2.24e-05 9.88e-06 2.74e-05 1.07e-05 3.85e-05 1.06e-05 5.23e-06 1.13e-05 1.22e-05 1.77e-05 6e-06 5.37e-06 9.16e-06 2.19e-05 2.02e-05 5.62e-06 3.29e-05 5.36e-06 8.66e-06 8.42e-06 2.14e-05 1.95e-05 1.34e-05 1.52e-06 1.93e-06 5.28e-06 9.6e-06 4.46e-06 2.37e-06 2.71e-06 3.63e-06 2.62e-06 1.44e-06 2.95e-05 2.67e-06 2.85e-07 1.35e-06 2.8e-06 3.18e-06 1.22e-06 1.04e-06