Genes within 1Mb (chr1:45508256:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 17093 eQTL 8.63e-45 -0.2 0.0135 0.0541 0.0723 0.432
ENSG00000086015 MAST2 -278731 eQTL 2.48e-10 0.124 0.0193 0.0 0.0 0.432
ENSG00000117461 PIK3R3 -624780 eQTL 1.18e-15 0.159 0.0196 0.0 0.0 0.432
ENSG00000117481 NSUN4 -831921 eQTL 3.10e-02 -0.0526 0.0243 0.0 0.0 0.432
ENSG00000132763 MMACHC 7956 eQTL 9.73e-03 -0.0791 0.0305 0.0 0.0 0.432
ENSG00000132781 MUTYH 167786 eQTL 8.76e-03 -0.0345 0.0132 0.0 0.0 0.432
ENSG00000159588 CCDC17 -115801 eQTL 2.24e-10 0.0894 0.0139 0.0 0.0 0.432
ENSG00000159592 GPBP1L1 -179857 eQTL 3.90e-03 0.0309 0.0107 0.0 0.0 0.432
ENSG00000159596 TMEM69 -179925 eQTL 1.20e-12 0.154 0.0214 0.0 0.0 0.432
ENSG00000197429 IPP -242394 eQTL 4.16e-03 0.0582 0.0203 0.0 0.0 0.432
ENSG00000225447 RPS15AP10 -137941 eQTL 7.71e-09 -0.192 0.0329 0.0 0.0 0.432
ENSG00000230896 AL604028.1 -188819 eQTL 3.11e-02 0.0817 0.0378 0.0 0.0 0.432
ENSG00000234329 AL604028.2 -143570 eQTL 8.15e-25 -0.249 0.0235 0.0 0.0 0.432
ENSG00000280670 CCDC163 8177 eQTL 2.79e-05 -0.155 0.0369 0.0 0.0 0.432
ENSG00000281912 LINC01144 204346 eQTL 9.83e-03 0.087 0.0336 0.0 0.0 0.432


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 17093 4.56e-05 3.89e-05 6.79e-06 1.67e-05 6.98e-06 1.67e-05 5.17e-05 6.03e-06 3.94e-05 1.97e-05 4.8e-05 2.12e-05 6.15e-05 1.67e-05 8.34e-06 2.45e-05 2.01e-05 3e-05 9.5e-06 7.86e-06 1.95e-05 4.32e-05 3.62e-05 1.05e-05 5.3e-05 1.04e-05 1.83e-05 1.58e-05 3.76e-05 2.77e-05 2.44e-05 1.65e-06 3.02e-06 7.8e-06 1.27e-05 6.78e-06 3.57e-06 3.47e-06 5.66e-06 3.57e-06 1.78e-06 4.61e-05 4.23e-06 4.37e-07 2.88e-06 5.01e-06 4.68e-06 1.84e-06 1.5e-06
ENSG00000086015 MAST2 -278731 1.25e-06 1.57e-06 2.84e-07 1.36e-06 3.5e-07 6.25e-07 1.48e-06 3.99e-07 1.77e-06 7.36e-07 2.07e-06 7.92e-07 2.45e-06 2.83e-07 3.95e-07 9.51e-07 9.55e-07 1.06e-06 5.83e-07 6.87e-07 7.69e-07 1.99e-06 1.42e-06 6.47e-07 2.16e-06 7.4e-07 9.3e-07 1.05e-06 1.31e-06 1.63e-06 7.84e-07 5.25e-07 3.99e-07 6.08e-07 5.69e-07 7.09e-07 8.21e-07 2.87e-07 5.09e-07 2.09e-07 2.91e-07 1.7e-06 3.57e-07 1.06e-07 1.74e-07 2.73e-07 2.09e-07 2.49e-07 2.44e-07
ENSG00000117461 PIK3R3 -624780 2.76e-07 1.67e-07 5.82e-08 2.41e-07 1.03e-07 8.33e-08 1.99e-07 5.68e-08 1.66e-07 1.03e-07 1.69e-07 1.2e-07 2.05e-07 8e-08 5.97e-08 9.01e-08 8.53e-08 2.04e-07 7.53e-08 6.03e-08 1.39e-07 2.15e-07 1.73e-07 3.4e-08 1.72e-07 1.51e-07 1.19e-07 1.44e-07 1.22e-07 1.46e-07 1.21e-07 7.91e-08 4.98e-08 9.5e-08 3.4e-08 5.14e-08 1.05e-07 8.37e-08 6.35e-08 8.16e-08 5.45e-08 1.59e-07 3.53e-08 7.26e-09 2.82e-08 6.83e-09 1e-07 2.1e-09 4.94e-08
ENSG00000132781 MUTYH 167786 3.53e-06 5.09e-06 8.56e-07 3.14e-06 1.38e-06 1.53e-06 4.13e-06 1.07e-06 5.1e-06 2.48e-06 5.59e-06 3.11e-06 7.5e-06 1.91e-06 1.13e-06 2.67e-06 2.76e-06 2.88e-06 1.45e-06 1.37e-06 2.84e-06 5.42e-06 4.56e-06 1.36e-06 5.08e-06 1.33e-06 2.55e-06 1.74e-06 3.88e-06 4.47e-06 2.7e-06 9.05e-07 5.4e-07 1.45e-06 1.92e-06 1.26e-06 1.07e-06 4.59e-07 1.05e-06 4.28e-07 2.4e-07 5.79e-06 3.83e-07 1.85e-07 3.4e-07 9.66e-07 8.55e-07 7.21e-07 4.54e-07
ENSG00000159588 CCDC17 -115801 5.46e-06 9.38e-06 1.17e-06 4.37e-06 2.27e-06 3.71e-06 9.62e-06 2.04e-06 7.75e-06 4.78e-06 1.05e-05 3.63e-06 1.15e-05 3.14e-06 2.59e-06 4.81e-06 4.11e-06 3.99e-06 2.23e-06 2.76e-06 5.13e-06 9.11e-06 6.96e-06 2.78e-06 1.02e-05 2.38e-06 4.22e-06 3.89e-06 6.45e-06 7.94e-06 4.32e-06 9.88e-07 9.16e-07 2.07e-06 2.5e-06 2.49e-06 1.39e-06 9.82e-07 1.38e-06 8.68e-07 6.15e-07 9.84e-06 8.97e-07 1.64e-07 7.87e-07 1.48e-06 9.12e-07 7.44e-07 4.44e-07
ENSG00000159596 TMEM69 -179925 2.91e-06 4.89e-06 7.66e-07 2.61e-06 1.12e-06 1.19e-06 2.98e-06 9.96e-07 4.36e-06 2.41e-06 4.9e-06 2.28e-06 6.47e-06 1.37e-06 1.43e-06 2.21e-06 1.89e-06 2.4e-06 1.36e-06 1.2e-06 2.71e-06 4.89e-06 3.84e-06 1.71e-06 4.69e-06 1.29e-06 1.88e-06 1.81e-06 3.09e-06 4.23e-06 1.94e-06 7.91e-07 5.51e-07 1.33e-06 1.74e-06 1.16e-06 9.76e-07 4.53e-07 1.25e-06 3.62e-07 2.11e-07 4.75e-06 3.81e-07 1.96e-07 3.27e-07 5.87e-07 6.65e-07 5.05e-07 3.42e-07
ENSG00000186603 \N 181351 2.77e-06 5e-06 7.85e-07 2.59e-06 1.08e-06 1.17e-06 2.95e-06 1.03e-06 4.18e-06 2.35e-06 4.75e-06 2.09e-06 6.58e-06 1.25e-06 1.49e-06 2.07e-06 1.92e-06 2.33e-06 1.36e-06 1.14e-06 2.79e-06 4.9e-06 3.78e-06 1.71e-06 4.64e-06 1.21e-06 1.87e-06 1.77e-06 3.06e-06 4.14e-06 1.93e-06 7.78e-07 6.31e-07 1.35e-06 1.68e-06 1.13e-06 9.78e-07 4.52e-07 1.27e-06 3.45e-07 1.96e-07 4.63e-06 4.34e-07 1.89e-07 2.97e-07 5.86e-07 6.79e-07 5.06e-07 3.26e-07
ENSG00000197429 IPP -242394 1.27e-06 2.53e-06 2.31e-07 1.86e-06 5.1e-07 6.96e-07 1.32e-06 4.99e-07 1.63e-06 8.44e-07 2.02e-06 1.29e-06 2.89e-06 5.79e-07 7.19e-07 1.06e-06 1.66e-06 1.36e-06 6.91e-07 1.29e-06 1.39e-06 3.09e-06 2.15e-06 9.74e-07 2.37e-06 1.12e-06 1.04e-06 1.8e-06 1.66e-06 1.99e-06 9.97e-07 4.37e-07 5.68e-07 6.25e-07 6.99e-07 9.75e-07 9.07e-07 3.26e-07 7.16e-07 3.34e-07 3.04e-07 2.7e-06 4.6e-07 1.74e-07 3.24e-07 3.09e-07 3.68e-07 2.46e-07 2.31e-07
ENSG00000225447 RPS15AP10 -137941 4.59e-06 8.23e-06 6.55e-07 3.6e-06 1.61e-06 1.76e-06 8.23e-06 1.44e-06 4.88e-06 3.54e-06 8.62e-06 3.25e-06 9.94e-06 1.73e-06 1.62e-06 3.98e-06 3.68e-06 3.94e-06 1.55e-06 2.15e-06 4.25e-06 7.51e-06 5.57e-06 1.97e-06 8.25e-06 1.99e-06 2.65e-06 2.73e-06 4.46e-06 7.05e-06 3.18e-06 1.02e-06 7.82e-07 1.71e-06 1.93e-06 2.1e-06 1.12e-06 4.36e-07 8.67e-07 6.17e-07 4.72e-07 8.06e-06 6.81e-07 1.84e-07 4.54e-07 8.79e-07 1.08e-06 6.25e-07 6.22e-07
ENSG00000234329 AL604028.2 -143570 4.29e-06 7.75e-06 6.2e-07 3.48e-06 1.54e-06 1.59e-06 7.52e-06 1.29e-06 4.62e-06 3.25e-06 8.01e-06 3.31e-06 9e-06 1.99e-06 1.45e-06 3.69e-06 3.72e-06 3.98e-06 1.44e-06 2.02e-06 3.6e-06 7.57e-06 5.05e-06 1.99e-06 7.87e-06 1.96e-06 2.23e-06 2.47e-06 4.36e-06 6.66e-06 2.65e-06 1.07e-06 7.57e-07 1.8e-06 2.09e-06 1.91e-06 1.03e-06 4.39e-07 8.26e-07 5.93e-07 3.62e-07 7.37e-06 5.96e-07 1.8e-07 3.58e-07 1.05e-06 1.14e-06 6.91e-07 6.13e-07
ENSG00000280670 CCDC163 8177 7.5e-05 7.09e-05 1.02e-05 2.48e-05 1.1e-05 2.46e-05 8.08e-05 1.02e-05 6.93e-05 3.86e-05 8.83e-05 3.54e-05 0.000118 3.12e-05 1.32e-05 4.6e-05 3.34e-05 5.25e-05 1.52e-05 1.48e-05 3.22e-05 7.97e-05 5.59e-05 1.85e-05 9.04e-05 1.98e-05 3.45e-05 2.82e-05 6.58e-05 4e-05 4.03e-05 3.28e-06 5.36e-06 1.26e-05 1.81e-05 1.06e-05 5.36e-06 5.96e-06 9.26e-06 4.53e-06 2.12e-06 7.46e-05 6.76e-06 6.44e-07 6.13e-06 9.38e-06 9.01e-06 3.79e-06 2.78e-06