Genes within 1Mb (chr1:45494812:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -292175 eQTL 5.27e-14 0.355 0.0464 0.0 0.0 0.0422
ENSG00000117425 PTCH2 651559 eQTL 1.73e-02 0.137 0.0573 0.0 0.0 0.0422
ENSG00000126088 UROD 483862 pQTL 3.09e-04 0.131 0.0363 0.0 0.0 0.0408
ENSG00000126088 UROD 483862 eQTL 3.28e-02 0.108 0.0504 0.0 0.0 0.0422
ENSG00000126106 TMEM53 820331 eQTL 4.83e-02 0.124 0.0626 0.0 0.0 0.0422
ENSG00000132773 TOE1 154760 eQTL 4.06e-03 -0.0923 0.0321 0.00106 0.00102 0.0422
ENSG00000132780 NASP -89034 eQTL 2.59e-09 -0.231 0.0385 0.0 0.0 0.0422
ENSG00000159588 CCDC17 -129245 eQTL 1.24e-15 -0.271 0.0333 0.0 0.0 0.0422
ENSG00000159592 GPBP1L1 -193301 eQTL 1.39e-02 0.0638 0.0259 0.0 0.0 0.0422
ENSG00000162415 ZSWIM5 188603 eQTL 7.49e-03 -0.136 0.0508 0.0 0.0 0.0422
ENSG00000197429 IPP -255838 eQTL 9.38e-03 -0.128 0.0492 0.0 0.0 0.0422
ENSG00000222009 BTBD19 686330 eQTL 1.93e-03 -0.111 0.0356 0.0 0.0 0.0422
ENSG00000232022 FAAHP1 -937317 eQTL 7.64e-03 -0.193 0.0724 0.00141 0.0 0.0422
ENSG00000234329 AL604028.2 -157014 eQTL 2.44e-02 -0.136 0.0602 0.0 0.0 0.0422
ENSG00000281912 LINC01144 190902 eQTL 2.66e-03 0.245 0.0813 0.0 0.0 0.0422


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N 3649 6.05e-05 5.65e-05 1.32e-05 2.71e-05 1.38e-05 2.78e-05 8.25e-05 1.45e-05 7.05e-05 4.31e-05 9.03e-05 3.91e-05 0.000104 3.31e-05 1.67e-05 4.96e-05 3.91e-05 5.73e-05 1.72e-05 1.78e-05 3.58e-05 7.56e-05 6.11e-05 2.1e-05 9.35e-05 2.44e-05 3.58e-05 3.45e-05 6.58e-05 4.87e-05 4.76e-05 5.34e-06 8.51e-06 1.66e-05 2.3e-05 1.28e-05 7.79e-06 9.14e-06 1.28e-05 7.36e-06 3.66e-06 6.24e-05 6.88e-06 1.27e-06 6.84e-06 1.14e-05 1.11e-05 6.1e-06 4.26e-06
ENSG00000086015 MAST2 -292175 1.2e-06 9.23e-07 2.88e-07 6.94e-07 2.69e-07 4.59e-07 1.07e-06 3.52e-07 1.28e-06 4.03e-07 1.4e-06 6.03e-07 1.57e-06 2.59e-07 4.16e-07 7.54e-07 7.73e-07 5.75e-07 5.34e-07 4.68e-07 6.12e-07 1.17e-06 7.79e-07 5.91e-07 1.92e-06 4.11e-07 7.31e-07 6.46e-07 9.4e-07 9.58e-07 5.62e-07 1.56e-07 2.34e-07 4.29e-07 4.49e-07 4.59e-07 5.02e-07 2.38e-07 2.94e-07 9.07e-08 2.86e-07 1.53e-06 1.1e-07 1.33e-07 1.73e-07 8.9e-08 2.3e-07 3.7e-08 1.57e-07
ENSG00000117425 PTCH2 651559 2.67e-07 1.33e-07 5.49e-08 2.07e-07 1.03e-07 8.21e-08 1.67e-07 5.68e-08 1.5e-07 6.75e-08 1.67e-07 1.15e-07 1.69e-07 7.64e-08 5.98e-08 7.97e-08 4.18e-08 1.51e-07 7.12e-08 4.89e-08 1.18e-07 1.31e-07 1.58e-07 2.83e-08 1.65e-07 1.31e-07 1.17e-07 1.04e-07 1.22e-07 9.49e-08 1.07e-07 3.93e-08 3.59e-08 8.7e-08 3.81e-08 2.74e-08 3.7e-08 7.49e-08 6.28e-08 3.75e-08 5.28e-08 1.46e-07 4.83e-08 1.71e-08 2.82e-08 1.65e-08 1e-07 2.07e-09 4.83e-08
ENSG00000117448 \N -55731 1.05e-05 1.24e-05 2.3e-06 7.65e-06 2.32e-06 5.45e-06 1.24e-05 2.92e-06 1.31e-05 6.37e-06 1.64e-05 6.86e-06 1.99e-05 4.54e-06 3.67e-06 8.18e-06 6.29e-06 1.03e-05 3.28e-06 3.09e-06 6.47e-06 1.18e-05 1.07e-05 3.69e-06 2.05e-05 4.45e-06 7.46e-06 5.28e-06 1.24e-05 9.18e-06 8.17e-06 1e-06 1.3e-06 3.59e-06 6.01e-06 3.03e-06 1.81e-06 2.14e-06 2.11e-06 1.38e-06 1.21e-06 1.63e-05 2.21e-06 2.85e-07 1.03e-06 2.02e-06 2.05e-06 8.91e-07 6.2e-07
ENSG00000126088 UROD 483862 3.53e-07 2.67e-07 7.16e-08 2.66e-07 1.09e-07 1.26e-07 3.25e-07 8.86e-08 2.53e-07 1.5e-07 2.84e-07 2.11e-07 3.48e-07 8.55e-08 8.45e-08 1.33e-07 8.42e-08 2.83e-07 9.71e-08 8.52e-08 1.61e-07 2.3e-07 2.11e-07 5.11e-08 3.27e-07 2.2e-07 1.74e-07 1.61e-07 1.54e-07 1.81e-07 1.76e-07 5.54e-08 4.96e-08 9.61e-08 1.29e-07 5.2e-08 1e-07 7.75e-08 5.89e-08 7.9e-08 4.9e-08 2.6e-07 1.67e-08 5.93e-09 7.89e-08 8.59e-09 9.25e-08 3.3e-09 5.56e-08
ENSG00000132773 TOE1 154760 3.17e-06 3.84e-06 6.05e-07 1.77e-06 8.63e-07 8.42e-07 2.48e-06 1.01e-06 3.53e-06 1.69e-06 3.62e-06 2.63e-06 5e-06 1.24e-06 9.35e-07 2.34e-06 1.58e-06 2.08e-06 1.48e-06 1.17e-06 2.06e-06 3.46e-06 3.35e-06 1.64e-06 4.53e-06 1.24e-06 1.9e-06 1.44e-06 3.09e-06 2.23e-06 2e-06 5.93e-07 5.69e-07 1.35e-06 1.88e-06 8.53e-07 9.86e-07 4.74e-07 1.31e-06 3.27e-07 2.79e-07 4.34e-06 3.82e-07 1.62e-07 4.01e-07 3.33e-07 6.48e-07 4.41e-07 3.41e-07
ENSG00000132780 NASP -89034 5.92e-06 9.04e-06 1.11e-06 4.25e-06 2.1e-06 2.7e-06 8.96e-06 1.86e-06 7.4e-06 4.26e-06 9.93e-06 4.77e-06 1.12e-05 3.68e-06 1.55e-06 5.73e-06 3.72e-06 4.4e-06 2.23e-06 2.23e-06 4.49e-06 7.66e-06 5.99e-06 2.21e-06 1.06e-05 2.97e-06 4.48e-06 3.05e-06 6.73e-06 6.42e-06 4.24e-06 8.78e-07 8e-07 2.77e-06 3.55e-06 2.09e-06 1.55e-06 1.49e-06 1.31e-06 9.52e-07 1.02e-06 9.28e-06 1.29e-06 1.9e-07 7.72e-07 1.13e-06 1.12e-06 8.43e-07 4.82e-07
ENSG00000159588 CCDC17 -129245 4.19e-06 4.94e-06 8.35e-07 3.02e-06 1.64e-06 1.55e-06 3.59e-06 1.18e-06 5.06e-06 2.44e-06 5.29e-06 3.34e-06 7.43e-06 2.47e-06 1.47e-06 3.81e-06 2.06e-06 3.57e-06 1.43e-06 1.02e-06 3.04e-06 4.79e-06 3.78e-06 1.4e-06 5.75e-06 2e-06 2.35e-06 1.85e-06 4.26e-06 3.38e-06 2.75e-06 4.18e-07 6.31e-07 1.88e-06 2.07e-06 1.17e-06 9.91e-07 4.4e-07 9.31e-07 3.71e-07 5.82e-07 5.55e-06 5.26e-07 1.6e-07 6.1e-07 6.92e-07 1.05e-06 7.05e-07 4.98e-07
ENSG00000159592 GPBP1L1 -193301 1.64e-06 2.62e-06 2.51e-07 1.7e-06 4.65e-07 7.82e-07 1.31e-06 6.57e-07 1.86e-06 9.02e-07 2.1e-06 1.29e-06 3.24e-06 1.1e-06 4.99e-07 1.5e-06 9.73e-07 1.7e-06 6.34e-07 7.96e-07 1.14e-06 2.35e-06 1.82e-06 9.91e-07 2.62e-06 1.36e-06 1.3e-06 1.45e-06 1.71e-06 1.5e-06 1.31e-06 3.41e-07 4.8e-07 8.98e-07 9.93e-07 9.86e-07 7.76e-07 4.2e-07 8.54e-07 3.48e-07 3.05e-07 2.98e-06 5.89e-07 1.74e-07 3.22e-07 3.29e-07 6.26e-07 1.99e-07 1.58e-07
ENSG00000162415 ZSWIM5 188603 1.97e-06 2.55e-06 2.73e-07 1.88e-06 4.63e-07 7.87e-07 1.3e-06 7.37e-07 1.88e-06 9.61e-07 2.39e-06 1.35e-06 3.35e-06 1.24e-06 5.46e-07 1.54e-06 1.02e-06 1.97e-06 7.09e-07 9.31e-07 1.19e-06 2.71e-06 2.02e-06 1.01e-06 2.95e-06 1.27e-06 1.31e-06 1.54e-06 1.76e-06 1.66e-06 1.64e-06 3.44e-07 4.16e-07 9.68e-07 1.02e-06 9.47e-07 7.47e-07 4.58e-07 9.37e-07 3.35e-07 1.83e-07 3.27e-06 6.49e-07 1.8e-07 3.27e-07 3.08e-07 7.09e-07 2.02e-07 1.74e-07
ENSG00000281912 LINC01144 190902 1.81e-06 2.71e-06 2.71e-07 1.76e-06 4.71e-07 7.92e-07 1.31e-06 6.96e-07 1.96e-06 9.48e-07 2.11e-06 1.25e-06 3.3e-06 1.11e-06 5.38e-07 1.52e-06 9.86e-07 1.89e-06 6.58e-07 8.21e-07 1.14e-06 2.51e-06 1.95e-06 1.02e-06 2.88e-06 1.33e-06 1.26e-06 1.42e-06 1.7e-06 1.59e-06 1.49e-06 3.1e-07 4.31e-07 9.24e-07 1.07e-06 9.92e-07 8.28e-07 4.39e-07 9.27e-07 3.33e-07 2.44e-07 3.06e-06 5.93e-07 1.81e-07 2.97e-07 3.62e-07 6.73e-07 2e-07 1.59e-07