Genes within 1Mb (chr1:45438614:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -52549 eQTL 6.30e-06 0.364 0.0801 0.00104 0.0 0.00834
ENSG00000117448 AKR1A1 -111929 eQTL 3.84e-04 -0.217 0.0608 0.0 0.0 0.00834
ENSG00000117450 PRDX1 -84433 pQTL 2.03e-03 0.276 0.0893 0.00208 0.00164 0.00867
ENSG00000117480 FAAH -955703 eQTL 1.75e-08 0.643 0.113 0.0 0.0 0.00834
ENSG00000117481 NSUN4 -901563 eQTL 4.08e-18 1.12 0.127 0.0 0.0 0.00834
ENSG00000126088 UROD 427664 pQTL 1.59e-02 -0.186 0.0771 0.0 0.0 0.00867
ENSG00000126088 UROD 427664 eQTL 2.00e-03 -0.348 0.112 0.0 0.0 0.00834
ENSG00000142959 BEST4 650444 eQTL 2.49e-02 0.339 0.151 0.0 0.0 0.00834
ENSG00000159588 CCDC17 -185443 eQTL 4.30e-08 -0.419 0.0758 0.0 0.0 0.00834
ENSG00000159596 TMEM69 -249567 eQTL 8.30e-03 -0.314 0.119 0.0 0.0 0.00834
ENSG00000198520 ARMH1 763901 eQTL 6.24e-03 0.263 0.0958 0.00175 0.0 0.00834
ENSG00000225447 RPS15AP10 -207583 eQTL 3.88e-02 -0.374 0.181 0.0 0.0 0.00834


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -52549 9.28e-06 9.38e-06 1.79e-06 5.63e-06 2.45e-06 4.42e-06 1.11e-05 2.15e-06 9.7e-06 5.38e-06 1.24e-05 5.47e-06 1.58e-05 3.74e-06 2.91e-06 6.67e-06 4.73e-06 8.09e-06 2.95e-06 3.12e-06 6.18e-06 9.62e-06 9.02e-06 3.99e-06 1.48e-05 4.43e-06 5.48e-06 4.51e-06 1.15e-05 1.02e-05 5.45e-06 1.02e-06 1.32e-06 3.85e-06 4.54e-06 2.82e-06 1.7e-06 2.02e-06 2.22e-06 1.42e-06 1.67e-06 1.25e-05 1.48e-06 3.18e-07 1.27e-06 1.74e-06 1.87e-06 6.16e-07 6.2e-07
ENSG00000117448 AKR1A1 -111929 4.9e-06 4.88e-06 6.25e-07 3.17e-06 1.5e-06 1.64e-06 5.49e-06 1.14e-06 4.87e-06 2.69e-06 5.67e-06 3.34e-06 7.64e-06 2.08e-06 1.16e-06 4.06e-06 1.86e-06 3.98e-06 1.44e-06 1.54e-06 2.67e-06 4.96e-06 4.44e-06 1.92e-06 7.25e-06 2.16e-06 2.22e-06 1.49e-06 4.73e-06 4.67e-06 2.85e-06 4.61e-07 7.92e-07 2.24e-06 2.09e-06 1.29e-06 1.1e-06 4.36e-07 9.34e-07 7.28e-07 9.9e-07 5.62e-06 3.83e-07 1.65e-07 7.94e-07 1.18e-06 1.08e-06 7.05e-07 5.64e-07
ENSG00000117480 FAAH -955703 2.76e-07 1.3e-07 5.03e-08 1.81e-07 1.01e-07 9.91e-08 1.6e-07 5.53e-08 1.47e-07 5.67e-08 1.52e-07 1.08e-07 1.53e-07 7.13e-08 6.25e-08 7.5e-08 4.01e-08 1.4e-07 5.97e-08 4.78e-08 1.21e-07 1.26e-07 1.45e-07 2.64e-08 1.55e-07 1.26e-07 1.13e-07 9.74e-08 1.2e-07 1.07e-07 1.02e-07 3.06e-08 3.89e-08 8.23e-08 5.99e-08 3.2e-08 5.04e-08 8.93e-08 6.86e-08 4.19e-08 5.3e-08 1.33e-07 5.2e-08 1.66e-08 4.25e-08 1.84e-08 1.21e-07 3.79e-09 4.88e-08
ENSG00000117481 NSUN4 -901563 2.77e-07 1.34e-07 5.64e-08 1.83e-07 9.8e-08 9.48e-08 1.67e-07 5.66e-08 1.5e-07 6.4e-08 1.63e-07 1.15e-07 1.69e-07 7.37e-08 5.72e-08 7.74e-08 4.12e-08 1.44e-07 6.32e-08 4.92e-08 1.26e-07 1.25e-07 1.44e-07 2.87e-08 1.65e-07 1.22e-07 1.18e-07 1.01e-07 1.22e-07 9.49e-08 1.06e-07 2.93e-08 4.02e-08 8.89e-08 3.63e-08 3.14e-08 5.22e-08 8.71e-08 6.43e-08 3.82e-08 5.33e-08 1.46e-07 5.21e-08 1.38e-08 3.42e-08 1.87e-08 1.2e-07 1.88e-09 5.02e-08
ENSG00000126088 UROD 427664 1.13e-06 6.78e-07 1.58e-07 4.34e-07 1.14e-07 3.11e-07 6.33e-07 2.26e-07 7.56e-07 3.16e-07 1.03e-06 5.35e-07 1.02e-06 1.56e-07 3.96e-07 4.14e-07 5.55e-07 4.16e-07 2.92e-07 2.68e-07 2.57e-07 5.36e-07 4.4e-07 3.01e-07 1.22e-06 2.53e-07 4.7e-07 3.95e-07 5.7e-07 7.42e-07 3.81e-07 3.99e-08 5.82e-08 2.12e-07 3.68e-07 1.85e-07 1.42e-07 9.84e-08 8.06e-08 8.72e-09 1.93e-07 7.04e-07 5.44e-08 1.99e-08 2.03e-07 2.64e-08 1.46e-07 2.44e-08 6.32e-08
ENSG00000159588 CCDC17 -185443 2.77e-06 2.46e-06 4.65e-07 1.86e-06 7.88e-07 8.48e-07 1.98e-06 8.31e-07 2.08e-06 1.1e-06 2.43e-06 1.39e-06 3.54e-06 1.44e-06 9.23e-07 1.98e-06 1.23e-06 2.22e-06 1.42e-06 1.25e-06 1.43e-06 3.09e-06 2.47e-06 1.64e-06 3.56e-06 1.03e-06 1.44e-06 1.82e-06 2.66e-06 1.99e-06 1.81e-06 4.15e-07 5.81e-07 1.35e-06 1.31e-06 9.73e-07 8.9e-07 4.74e-07 1.28e-06 3.46e-07 4.03e-07 3.37e-06 4.98e-07 1.9e-07 3.47e-07 3.14e-07 8.95e-07 1.95e-07 1.77e-07
ENSG00000159596 TMEM69 -249567 1.49e-06 1.34e-06 2.54e-07 1.2e-06 4.89e-07 6.38e-07 1.35e-06 4.04e-07 1.7e-06 7.2e-07 2.06e-06 1.28e-06 2.58e-06 3.61e-07 3.41e-07 1e-06 1.11e-06 1.17e-06 5.54e-07 6.46e-07 6.34e-07 1.92e-06 1.35e-06 8.48e-07 2.35e-06 9.37e-07 1e-06 9.59e-07 1.75e-06 1.29e-06 8.51e-07 2.46e-07 3.55e-07 6.66e-07 6.64e-07 6.33e-07 7.21e-07 3.42e-07 4.82e-07 2.29e-07 3.05e-07 1.93e-06 2.9e-07 1.14e-07 3.89e-07 2.32e-07 3.78e-07 1.43e-07 2.89e-07