Genes within 1Mb (chr1:45362296:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -128867 eQTL 2.13e-30 0.169 0.0143 0.0 0.0 0.35
ENSG00000086015 MAST2 -424691 eQTL 2.30e-10 -0.126 0.0197 0.0 0.0 0.35
ENSG00000117461 PIK3R3 -770740 eQTL 6.70e-12 -0.14 0.0202 0.0 0.0 0.35
ENSG00000132773 TOE1 22244 eQTL 4.05e-02 0.0278 0.0135 0.0 0.0 0.35
ENSG00000132781 MUTYH 21826 eQTL 1.37e-02 0.0332 0.0134 0.0 0.0 0.35
ENSG00000142959 BEST4 574126 eQTL 2.65e-02 -0.0633 0.0285 0.0 0.0 0.35
ENSG00000159592 GPBP1L1 -325817 eQTL 1.88e-03 -0.034 0.0109 0.0 0.0 0.35
ENSG00000159596 TMEM69 -325885 eQTL 2.09e-05 -0.0952 0.0223 0.0 0.0 0.35
ENSG00000186603 HPDL 35391 eQTL 5.95e-02 -0.0524 0.0278 0.00104 0.0 0.35
ENSG00000222009 BTBD19 553814 eQTL 1.17e-02 0.0379 0.015 0.0 0.0 0.35
ENSG00000225447 RPS15AP10 -283901 eQTL 7.78e-10 0.208 0.0335 0.0 0.0 0.35
ENSG00000225721 AL592166.1 586486 eQTL 2.58e-02 -0.0815 0.0365 0.0 0.0 0.35
ENSG00000234329 AL604028.2 -289530 eQTL 2.59e-18 0.218 0.0244 0.0 0.0 0.35
ENSG00000280670 CCDC163 -137783 eQTL 7.42e-05 -0.15 0.0377 0.0 0.0 0.35
ENSG00000281912 LINC01144 58386 eQTL 3.61e-06 -0.159 0.0341 0.0 0.0 0.35


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -128867 4.26e-06 5.08e-06 4.23e-07 2.96e-06 6.13e-07 1.19e-06 4e-06 9.31e-07 4.18e-06 1.47e-06 4.22e-06 3.3e-06 6.6e-06 2.15e-06 1.05e-06 1.97e-06 1.81e-06 2.78e-06 1.5e-06 1.07e-06 1.41e-06 3.5e-06 3.45e-06 1.64e-06 5.08e-06 1.13e-06 1.84e-06 1.7e-06 3.92e-06 2.88e-06 2.02e-06 4.17e-07 5.91e-07 1.49e-06 2.15e-06 9.23e-07 8.05e-07 4.2e-07 1.3e-06 3.46e-07 3.05e-07 4.84e-06 4.63e-07 1.66e-07 2.96e-07 3.57e-07 8.61e-07 2.2e-07 2.4e-07
ENSG00000086015 MAST2 -424691 5.74e-07 5.33e-07 6.42e-08 3.58e-07 1.02e-07 1.26e-07 4.14e-07 7.65e-08 2.35e-07 1.05e-07 3.32e-07 1.96e-07 3.77e-07 9.18e-08 7.35e-08 1.06e-07 8.64e-08 2.87e-07 7.76e-08 7.26e-08 1.34e-07 2.15e-07 2.26e-07 5.01e-08 3.98e-07 1.9e-07 1.37e-07 1.36e-07 1.58e-07 1.85e-07 1.76e-07 4.29e-08 4.97e-08 9.61e-08 2.58e-07 2.85e-08 6.95e-08 6.2e-08 4.78e-08 7.78e-08 4.53e-08 2.65e-07 2.16e-08 2.66e-08 3.34e-08 8.07e-09 8.21e-08 0.0 4.72e-08
ENSG00000117448 \N -188247 2.13e-06 2.63e-06 2.75e-07 1.76e-06 3.96e-07 7.18e-07 1.53e-06 4.22e-07 1.72e-06 6.82e-07 1.96e-06 1.46e-06 2.84e-06 1.01e-06 3.41e-07 9.77e-07 1.13e-06 1.35e-06 5.81e-07 6.08e-07 7.67e-07 1.9e-06 1.6e-06 7.85e-07 2.69e-06 9.3e-07 1.01e-06 8.4e-07 1.69e-06 1.36e-06 8.36e-07 2.78e-07 2.8e-07 5.85e-07 1.02e-06 4.36e-07 7.32e-07 3.65e-07 4.94e-07 2.03e-07 2.83e-07 2.68e-06 4.34e-07 1.93e-07 3.24e-07 2.45e-07 2.66e-07 6.08e-08 1.47e-07
ENSG00000117461 PIK3R3 -770740 2.67e-07 1.3e-07 3.62e-08 1.84e-07 9.02e-08 9.87e-08 1.44e-07 5.33e-08 1.4e-07 4.38e-08 1.62e-07 7.78e-08 1.3e-07 6.38e-08 5.55e-08 7.5e-08 3.88e-08 1.18e-07 5.19e-08 4.21e-08 1.04e-07 1.27e-07 1.32e-07 4.13e-08 1.33e-07 1.14e-07 1.12e-07 8.71e-08 1.03e-07 1.12e-07 9.73e-08 4.03e-08 3.09e-08 8.65e-08 8.38e-08 3.9e-08 5.01e-08 9.22e-08 7.23e-08 3.18e-08 4.76e-08 1.31e-07 5.08e-08 1.07e-08 7.26e-08 1.67e-08 1.22e-07 3.99e-09 4.73e-08
ENSG00000132781 MUTYH 21826 1.77e-05 2.3e-05 3.06e-06 1.28e-05 3.03e-06 8.57e-06 2.62e-05 3.46e-06 2.01e-05 8.95e-06 2.45e-05 9.87e-06 3.45e-05 8.95e-06 5.13e-06 9.99e-06 1.04e-05 1.6e-05 4.64e-06 4.8e-06 8.04e-06 1.78e-05 1.9e-05 5.15e-06 3e-05 5.58e-06 8.02e-06 7.63e-06 1.98e-05 1.63e-05 1.29e-05 1.24e-06 1.51e-06 4.4e-06 8.76e-06 3.8e-06 1.91e-06 2.61e-06 3.34e-06 2.11e-06 1.25e-06 2.52e-05 2.66e-06 2.96e-07 1.35e-06 2.59e-06 2.8e-06 1.06e-06 6.19e-07
ENSG00000142945 \N 622478 2.76e-07 1.53e-07 3.69e-08 2.05e-07 9.01e-08 9.9e-08 1.67e-07 5.48e-08 1.45e-07 4.74e-08 1.52e-07 9e-08 1.47e-07 7.37e-08 6.02e-08 7.3e-08 4.17e-08 1.33e-07 5.82e-08 4.31e-08 1.19e-07 1.24e-07 1.45e-07 2.95e-08 1.5e-07 1.21e-07 1.07e-07 9.36e-08 1.12e-07 1.02e-07 9.92e-08 3.64e-08 3.61e-08 8e-08 3.81e-08 3.76e-08 5.59e-08 8.72e-08 6.86e-08 3.71e-08 4.36e-08 1.4e-07 5.39e-08 1.76e-08 5.43e-08 1.84e-08 1.21e-07 3.8e-09 4.94e-08
ENSG00000159596 TMEM69 -325885 1.26e-06 9.28e-07 1.08e-07 3.96e-07 1.07e-07 3.15e-07 7.25e-07 1.91e-07 6.52e-07 2.34e-07 1.08e-06 4.94e-07 9.77e-07 1.98e-07 2.57e-07 2.55e-07 4.87e-07 4.39e-07 2.25e-07 1.78e-07 2.09e-07 4.81e-07 4.06e-07 2.29e-07 1.28e-06 2.56e-07 3.37e-07 2.68e-07 4.76e-07 6.35e-07 3.79e-07 6.49e-08 5.31e-08 1.73e-07 3.27e-07 6.85e-08 1.4e-07 9.84e-08 7.5e-08 2.71e-08 7.16e-08 7.53e-07 7.37e-08 1.3e-07 1.17e-07 1.46e-08 1.07e-07 1.18e-08 5.05e-08
ENSG00000186603 HPDL 35391 1.24e-05 1.52e-05 1.93e-06 9.25e-06 2.38e-06 5.91e-06 1.85e-05 2.46e-06 1.45e-05 5.94e-06 1.74e-05 6.94e-06 2.38e-05 5.14e-06 3.67e-06 6.97e-06 7.38e-06 1.11e-05 3.14e-06 3.23e-06 6.18e-06 1.15e-05 1.2e-05 3.47e-06 2.22e-05 4.53e-06 6.74e-06 4.92e-06 1.45e-05 1.07e-05 8.58e-06 9.82e-07 1.17e-06 3.55e-06 6.34e-06 2.69e-06 1.78e-06 1.93e-06 2.18e-06 1.18e-06 1.04e-06 1.71e-05 1.63e-06 2.27e-07 7.91e-07 1.78e-06 1.82e-06 7.25e-07 4.19e-07
ENSG00000225447 RPS15AP10 -283901 1.29e-06 9.39e-07 1.5e-07 9.83e-07 1.12e-07 4.12e-07 1.16e-06 3.02e-07 1.14e-06 3.12e-07 1.35e-06 5.68e-07 1.46e-06 2.72e-07 4.03e-07 4.12e-07 7.78e-07 5.65e-07 3.51e-07 4.13e-07 2.29e-07 7.06e-07 6.63e-07 4.38e-07 1.86e-06 2.47e-07 5.49e-07 3.89e-07 8e-07 9.08e-07 5.1e-07 4.25e-08 1.04e-07 2.98e-07 4.91e-07 1.36e-07 2.96e-07 1.38e-07 1.33e-07 1.8e-08 1.18e-07 1.26e-06 5.53e-08 1.74e-07 1.81e-07 4.57e-08 1.45e-07 3.21e-08 6.46e-08
ENSG00000234329 AL604028.2 -289530 1.27e-06 9.73e-07 1.23e-07 9.2e-07 1.12e-07 3.69e-07 1.13e-06 2.88e-07 1.08e-06 3.1e-07 1.32e-06 5.77e-07 1.43e-06 2.57e-07 3.86e-07 3.96e-07 7.47e-07 5.53e-07 3.26e-07 3.96e-07 2.41e-07 6.48e-07 6.11e-07 3.93e-07 1.79e-06 2.48e-07 5.04e-07 3.62e-07 7.07e-07 8.47e-07 4.59e-07 3.28e-08 8.37e-08 2.72e-07 4.31e-07 1.18e-07 2.79e-07 1.42e-07 1.54e-07 8.66e-09 1.22e-07 1.19e-06 5.37e-08 1.57e-07 1.67e-07 4.43e-08 1.46e-07 3.09e-08 6.15e-08
ENSG00000281912 LINC01144 58386 8.53e-06 1.04e-05 9.81e-07 6.13e-06 1.85e-06 4.07e-06 1.06e-05 2.03e-06 9.51e-06 4.27e-06 1.17e-05 5.26e-06 1.36e-05 3.78e-06 2.07e-06 5.46e-06 4.09e-06 6.51e-06 2.28e-06 2.63e-06 3.43e-06 7.74e-06 6.85e-06 2.6e-06 1.3e-05 2.93e-06 4.46e-06 2.73e-06 8.8e-06 7.65e-06 4.97e-06 7.36e-07 6.44e-07 2.77e-06 4.59e-06 1.59e-06 1.27e-06 9.96e-07 1.59e-06 9.52e-07 7.69e-07 1.19e-05 1.34e-06 1.38e-07 7.45e-07 1.02e-06 9.63e-07 6.58e-07 5.14e-07