Genes within 1Mb (chr1:45352663:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -138500 eQTL 2.65e-02 -0.0504 0.0227 0.0 0.0 0.121
ENSG00000085999 RAD54L -895025 eQTL 2.04e-03 -0.0925 0.0299 0.00177 0.00164 0.121
ENSG00000117450 PRDX1 -170384 eQTL 4.24e-02 0.0357 0.0176 0.0 0.0 0.121
ENSG00000126088 UROD 341713 pQTL 1.46e-05 0.0961 0.0221 0.0 0.0 0.117
ENSG00000126088 UROD 341713 eQTL 2.73e-05 0.132 0.0314 0.0 0.0 0.121
ENSG00000132128 LRRC41 -950945 eQTL 4.02e-02 0.0535 0.0261 0.00101 0.0 0.121
ENSG00000132763 MMACHC -147637 eQTL 2.72e-03 0.139 0.0463 0.0 0.0 0.121
ENSG00000132780 NASP -231183 eQTL 1.20e-02 0.0617 0.0245 0.0 0.0 0.121
ENSG00000132781 MUTYH 12193 eQTL 6.85e-05 -0.0796 0.0199 0.00293 0.0027 0.121
ENSG00000159596 TMEM69 -335518 eQTL 3.95e-04 -0.118 0.0333 0.0 0.0 0.121
ENSG00000186603 HPDL 25758 eQTL 5.75e-02 -0.0787 0.0414 0.00111 0.0 0.121
ENSG00000222009 BTBD19 544181 eQTL 2.14e-08 -0.125 0.0221 0.0 0.0 0.121
ENSG00000234093 RPS15AP11 571948 eQTL 1.73e-02 0.126 0.053 0.0 0.0 0.121
ENSG00000280670 CCDC163 -147416 eQTL 3.13e-31 0.635 0.0527 0.0 0.0 0.121
ENSG00000281912 LINC01144 48753 eQTL 7.25e-03 -0.137 0.0511 0.0 0.0 0.121


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117419 \N 997403 2.66e-07 1.06e-07 3.35e-08 1.78e-07 9.91e-08 9.32e-08 1.39e-07 5.35e-08 1.37e-07 4.24e-08 1.63e-07 8.02e-08 1.23e-07 6.21e-08 5.4e-08 8.01e-08 5.1e-08 1.07e-07 5.2e-08 3.89e-08 1.06e-07 1.33e-07 1.29e-07 4.53e-08 1.32e-07 1.13e-07 1.1e-07 8.71e-08 9.97e-08 1.09e-07 9.75e-08 3.76e-08 2.74e-08 8.25e-08 9.02e-08 4.07e-08 4.72e-08 9.44e-08 8.3e-08 3.34e-08 4.45e-08 1.39e-07 3.98e-08 1.29e-08 8.16e-08 1.69e-08 1.26e-07 4.26e-09 4.77e-08
ENSG00000126088 UROD 341713 8.48e-07 3.47e-07 7.16e-08 3.58e-07 1.06e-07 1.57e-07 4.25e-07 8.11e-08 2.56e-07 1.89e-07 3.32e-07 2.09e-07 4.27e-07 9.15e-08 1.68e-07 1.46e-07 6.17e-08 2.83e-07 1.62e-07 8.39e-08 1.52e-07 2.7e-07 2.63e-07 1.13e-07 3.7e-07 2e-07 1.97e-07 1.48e-07 2.11e-07 1.8e-07 1.59e-07 6.04e-08 5.86e-08 1.27e-07 1.95e-07 3.18e-08 1.05e-07 6.78e-08 4.9e-08 6.67e-08 3.24e-08 2.71e-07 4.18e-08 5.54e-09 7.93e-08 1.95e-08 9.38e-08 2.8e-09 4.54e-08
ENSG00000132781 MUTYH 12193 3.69e-05 2.45e-05 4.24e-06 1.24e-05 3.42e-06 1.24e-05 3.12e-05 3.29e-06 2.01e-05 1.03e-05 2.68e-05 9.35e-06 3.59e-05 8.91e-06 5.53e-06 1.25e-05 9.88e-06 1.78e-05 5.87e-06 4.28e-06 9.77e-06 2.37e-05 2.27e-05 6.4e-06 3.13e-05 5.78e-06 8.84e-06 8.79e-06 2.3e-05 1.69e-05 1.29e-05 1.34e-06 1.64e-06 5.59e-06 7.96e-06 4.02e-06 2.05e-06 2.71e-06 3.25e-06 2.3e-06 1.29e-06 2.78e-05 2.64e-06 2.22e-07 1.95e-06 2.74e-06 3.42e-06 1.29e-06 1.02e-06
ENSG00000222009 BTBD19 544181 2.95e-07 1.34e-07 4.48e-08 1.97e-07 9.16e-08 9.48e-08 1.6e-07 5.43e-08 1.45e-07 6.08e-08 1.55e-07 9e-08 1.52e-07 7.13e-08 5.82e-08 7.49e-08 3.98e-08 1.27e-07 6.75e-08 4.78e-08 1.21e-07 1.24e-07 1.45e-07 2.87e-08 1.46e-07 1.21e-07 1.1e-07 9.65e-08 1.16e-07 1.1e-07 9.7e-08 2.99e-08 3.43e-08 8.72e-08 5.64e-08 3.94e-08 4.49e-08 8.76e-08 6.86e-08 3.98e-08 5.34e-08 1.36e-07 4.83e-08 1.55e-08 4.25e-08 1.71e-08 1.22e-07 1.88e-09 5.04e-08
ENSG00000280670 CCDC163 -147416 2.96e-06 2.19e-06 2.29e-07 1.43e-06 3.36e-07 6.43e-07 1.29e-06 4.35e-07 1.7e-06 7.31e-07 1.94e-06 1.05e-06 2.56e-06 3.41e-07 4.63e-07 9.68e-07 9.26e-07 1.09e-06 5.54e-07 5.13e-07 7.58e-07 1.92e-06 1.64e-06 6.22e-07 2.39e-06 8.11e-07 1.14e-06 9.24e-07 1.73e-06 1.27e-06 8.35e-07 2.06e-07 2.84e-07 5.61e-07 7.4e-07 4.47e-07 6.97e-07 2.71e-07 4.18e-07 2.49e-07 2.88e-07 2.35e-06 3.43e-07 9.61e-08 3.17e-07 3.24e-07 2.28e-07 3.75e-08 1.09e-07
ENSG00000281912 LINC01144 48753 1e-05 9.5e-06 6.56e-07 4.02e-06 1.67e-06 3.41e-06 9.73e-06 1.11e-06 4.88e-06 3.55e-06 8.91e-06 2.82e-06 1.04e-05 2.17e-06 1.73e-06 4.58e-06 2.24e-06 3.76e-06 1.65e-06 1.39e-06 2.66e-06 7.49e-06 5.73e-06 2.02e-06 9.65e-06 2.31e-06 3.57e-06 1.71e-06 6.87e-06 5.88e-06 3.43e-06 4.2e-07 5.21e-07 2.34e-06 1.99e-06 9.39e-07 1.07e-06 4.4e-07 8.5e-07 4.26e-07 4.36e-07 8.25e-06 6.63e-07 1.6e-07 7.43e-07 8.06e-07 9.99e-07 4.28e-07 3.42e-07