Genes within 1Mb (chr1:45351837:TTA:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -139326 eQTL 2.68e-02 0.0503 0.0227 0.0 0.0 0.121
ENSG00000085999 RAD54L -895851 eQTL 2.35e-03 0.0913 0.0299 0.00157 0.00148 0.121
ENSG00000117450 PRDX1 -171210 eQTL 4.63e-02 -0.0351 0.0176 0.0 0.0 0.121
ENSG00000126088 UROD 340887 pQTL 1.31e-05 -0.0967 0.0221 0.0 0.0 0.117
ENSG00000126088 UROD 340887 eQTL 3.04e-05 -0.132 0.0314 0.0 0.0 0.121
ENSG00000132128 LRRC41 -951771 eQTL 4.42e-02 -0.0525 0.0261 0.0 0.0 0.121
ENSG00000132763 MMACHC -148463 eQTL 2.55e-03 -0.14 0.0464 0.0 0.0 0.121
ENSG00000132780 NASP -232009 eQTL 1.27e-02 -0.0612 0.0245 0.0 0.0 0.121
ENSG00000132781 MUTYH 11367 eQTL 8.00e-05 0.0789 0.0199 0.00252 0.0023 0.121
ENSG00000159596 TMEM69 -336344 eQTL 3.86e-04 0.119 0.0333 0.0 0.0 0.121
ENSG00000186603 HPDL 24932 eQTL 5.69e-02 0.0789 0.0414 0.00111 0.0 0.121
ENSG00000222009 BTBD19 543355 eQTL 2.29e-08 0.124 0.0221 0.0 0.0 0.121
ENSG00000234093 RPS15AP11 571122 eQTL 1.76e-02 -0.126 0.053 0.0 0.0 0.121
ENSG00000280670 CCDC163 -148242 eQTL 5.73e-31 -0.633 0.0528 0.0 0.0 0.121
ENSG00000281912 LINC01144 47927 eQTL 6.50e-03 0.139 0.0511 0.0 0.0 0.121


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117419 \N 996577 9.36e-07 5.33e-07 7.45e-08 2.15e-07 9.25e-08 8.37e-08 2.24e-07 5.19e-08 1.45e-07 5.42e-08 7.44e-07 8.59e-08 1.95e-07 1.01e-07 6.25e-08 7.36e-08 4.09e-08 1.72e-07 5.19e-08 3.15e-08 1.08e-07 1.24e-07 1.58e-07 4.26e-08 2.02e-07 1.15e-07 1.08e-07 1.01e-07 1.12e-07 1e-07 1.93e-07 3.29e-08 2.74e-08 8.34e-08 4.84e-08 3.97e-08 4.95e-08 8.75e-08 8.3e-08 3.74e-08 2.6e-08 2.19e-07 3.99e-08 2.85e-08 7.26e-08 1.69e-08 1.44e-07 4.96e-09 4.72e-08
ENSG00000126088 UROD 340887 2.17e-06 2.61e-06 2.91e-07 6.97e-07 1.96e-07 4.82e-07 1.52e-06 1.03e-07 1.11e-06 3.12e-07 1.99e-06 3.84e-07 1.46e-06 2.98e-07 4.55e-07 3.57e-07 6.29e-07 5.27e-07 9.19e-08 4.31e-08 2.01e-07 5.5e-07 8.03e-07 1.04e-07 1.95e-06 1.76e-07 3.68e-07 5.31e-07 5.56e-07 9.73e-07 7.49e-07 3.72e-08 3.13e-08 1.69e-07 3.35e-07 7.56e-08 5.08e-08 9.23e-08 6.54e-08 4.19e-08 3.07e-08 1.62e-06 4.33e-07 1.83e-08 1.69e-07 1.25e-08 1.18e-07 4.33e-09 4.74e-08
ENSG00000132781 MUTYH 11367 0.000215 6.86e-05 8.75e-06 1.6e-05 6.98e-06 3.49e-05 4.51e-05 2.74e-06 2.72e-05 1.27e-05 4.02e-05 1.74e-05 7.22e-05 1.06e-05 1.05e-05 2.85e-05 2.51e-05 3.11e-05 5.39e-06 3.12e-06 1.13e-05 5.79e-05 3.5e-05 8.82e-06 8.89e-05 1.64e-05 1.51e-05 9.74e-06 2.57e-05 3.16e-05 2.56e-05 8.07e-07 1.93e-06 6.16e-06 1.01e-05 6.2e-06 2.15e-06 2.99e-06 2.95e-06 3.04e-06 1.48e-06 4.78e-05 1.58e-05 3.6e-07 2.3e-06 2.71e-06 4.83e-06 8.29e-07 6.13e-07
ENSG00000222009 BTBD19 543355 1.21e-06 9.74e-07 3.06e-07 3.87e-07 1.1e-07 2.16e-07 6.08e-07 5.82e-08 3.03e-07 1.5e-07 1.79e-06 1.48e-07 6.47e-07 2.4e-07 1.51e-07 1.33e-07 1.01e-07 3.56e-07 6.32e-08 4.03e-08 1.27e-07 2.15e-07 3.08e-07 2.68e-08 7.94e-07 1.21e-07 1.25e-07 2.18e-07 1.76e-07 4.27e-07 5.48e-07 3.41e-08 3.26e-08 9.98e-08 1.39e-07 2.74e-08 4.51e-08 9.44e-08 8.3e-08 3.05e-08 3.71e-08 8.45e-07 6.17e-08 7.51e-09 3.3e-08 1.01e-08 1.25e-07 4.7e-09 4.61e-08
ENSG00000280670 CCDC163 -148242 9.21e-06 1.33e-05 6.38e-07 2.94e-06 6.04e-07 1.03e-06 3.59e-06 4.77e-07 2.25e-06 8.55e-07 7.38e-06 1.35e-06 3.96e-06 1.91e-06 9.86e-07 1.77e-06 1.79e-06 2.09e-06 5.54e-07 1.86e-07 6.7e-07 3.2e-06 3.37e-06 9.78e-07 4.92e-06 1.05e-06 1.27e-06 1.7e-06 1.8e-06 1.99e-06 2.62e-06 3.68e-08 1.87e-07 8.93e-07 1.54e-06 8.7e-07 1.4e-07 1.21e-07 1.24e-07 3.32e-07 3.43e-08 6.09e-06 1.26e-06 1.3e-07 3.67e-07 3.28e-07 1.93e-07 0.0 5.02e-08
ENSG00000281912 LINC01144 47927 9.03e-05 7.39e-05 3.15e-06 7.65e-06 2.44e-06 6.64e-06 1.23e-05 1.26e-06 6.97e-06 4.1e-06 1.41e-05 5.59e-06 1.47e-05 3.63e-06 4.14e-06 7.21e-06 8.19e-06 7.7e-06 2.2e-06 1.51e-06 3.45e-06 1.01e-05 1.02e-05 3.32e-06 2.63e-05 4.58e-06 4.81e-06 3.31e-06 7.82e-06 7.71e-06 7.01e-06 4.75e-08 6.68e-07 2.71e-06 4.96e-06 2.31e-06 9.23e-07 4.73e-07 9.68e-07 1.01e-06 2.8e-07 1.89e-05 4.5e-06 1.59e-07 7.74e-07 9.38e-07 1.05e-06 1.95e-07 8.53e-08