Genes within 1Mb (chr1:45336998:A:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -154165 eQTL 4.21e-28 -0.155 0.0137 0.0 0.0 0.482
ENSG00000086015 MAST2 -449989 eQTL 1.37e-03 0.0615 0.0192 0.0 0.0 0.482
ENSG00000117461 PIK3R3 -796038 eQTL 3.26e-10 0.123 0.0193 0.0 0.0 0.482
ENSG00000126088 UROD 326048 pQTL 3.02e-04 -0.0515 0.0142 0.0 0.0 0.484
ENSG00000126088 UROD 326048 eQTL 2.56e-03 -0.0612 0.0202 0.0 0.0 0.482
ENSG00000142945 KIF2C 597180 eQTL 2.97e-02 0.0356 0.0163 0.0 0.0 0.482
ENSG00000159588 CCDC17 -287059 eQTL 1.49e-07 0.0724 0.0137 0.0 0.0 0.482
ENSG00000159596 TMEM69 -351183 eQTL 1.53e-09 0.129 0.0211 0.0 0.0 0.482
ENSG00000186603 HPDL 10093 eQTL 2.10e-02 0.0613 0.0265 0.00169 0.0 0.482
ENSG00000197429 IPP -413652 eQTL 2.29e-02 0.0451 0.0198 0.0 0.0 0.482
ENSG00000222009 BTBD19 528516 eQTL 2.86e-02 0.0315 0.0144 0.0 0.0 0.482
ENSG00000225447 RPS15AP10 -309199 eQTL 1.59e-06 -0.156 0.0323 0.0 0.0 0.482
ENSG00000234329 AL604028.2 -314828 eQTL 1.21e-13 -0.178 0.0236 0.0 0.0 0.482
ENSG00000280670 CCDC163 -163081 eQTL 1.84e-04 -0.135 0.036 0.0 0.0 0.482
ENSG00000281912 LINC01144 33088 eQTL 2.71e-07 0.168 0.0324 0.0 0.0 0.482


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -154165 3.75e-06 4.55e-06 7.11e-07 2.41e-06 6.04e-07 7.75e-07 2.5e-06 9.02e-07 4.22e-06 1.7e-06 4.08e-06 2.94e-06 6.48e-06 1.4e-06 1.3e-06 2.99e-06 1.97e-06 2.38e-06 1.42e-06 9.89e-07 2.77e-06 4.79e-06 3.3e-06 1.88e-06 4.66e-06 1.14e-06 2.15e-06 1.84e-06 3.9e-06 3.08e-06 1.93e-06 5.42e-07 7.91e-07 1.42e-06 1.9e-06 9.97e-07 9.06e-07 4.68e-07 1.34e-06 4.88e-07 2.78e-07 5.14e-06 6.31e-07 1.52e-07 4.38e-07 3.54e-07 7.71e-07 6.92e-07 6.19e-07
ENSG00000117450 \N -186049 2.22e-06 2.7e-06 7.57e-07 2.01e-06 4.65e-07 7.82e-07 1.56e-06 5.72e-07 2.24e-06 9.91e-07 2.46e-06 1.45e-06 3.54e-06 9.7e-07 9.11e-07 1.98e-06 1.34e-06 2.18e-06 9.83e-07 1.4e-06 1.4e-06 3.51e-06 2.11e-06 1.03e-06 3.45e-06 1.28e-06 1.38e-06 1.81e-06 1.95e-06 1.84e-06 2e-06 3.97e-07 6.01e-07 1.14e-06 1.23e-06 1.02e-06 8.57e-07 4.2e-07 1.07e-06 3.81e-07 1.67e-07 4.08e-06 3.65e-07 1.68e-07 3.45e-07 3.34e-07 6.76e-07 2.87e-07 4.67e-07
ENSG00000117461 PIK3R3 -796038 2.67e-07 1.35e-07 7e-08 1.83e-07 9.21e-08 9.8e-08 1.61e-07 5.37e-08 1.45e-07 5.67e-08 1.57e-07 1.05e-07 1.59e-07 6.56e-08 5.82e-08 7.74e-08 4.17e-08 1.27e-07 6.92e-08 4.78e-08 1.25e-07 1.31e-07 1.5e-07 3.03e-08 1.63e-07 1.21e-07 1.13e-07 1.04e-07 1.2e-07 9.49e-08 1.06e-07 3.26e-08 3.21e-08 8e-08 7.51e-08 3.28e-08 4.49e-08 9.26e-08 6.86e-08 4.24e-08 5.41e-08 1.5e-07 3.4e-08 2e-08 2.64e-08 1.87e-08 1.21e-07 0.0 5.35e-08
ENSG00000159588 CCDC17 -287059 1.26e-06 9.2e-07 2.52e-07 9.74e-07 1.77e-07 4.51e-07 1.2e-06 3.49e-07 1.44e-06 4.24e-07 1.56e-06 7e-07 2.16e-06 2.65e-07 5.62e-07 9.27e-07 8.54e-07 5.88e-07 7.76e-07 6.55e-07 7.54e-07 1.81e-06 9.26e-07 6.06e-07 2.06e-06 3.71e-07 8.75e-07 7.45e-07 1.28e-06 1.27e-06 6.96e-07 1.87e-07 2.89e-07 5.21e-07 4.36e-07 4.63e-07 7.49e-07 1.24e-07 3.48e-07 2.09e-07 2.8e-07 1.63e-06 3.92e-07 1.77e-07 3.24e-07 1.26e-07 2.22e-07 2.52e-07 1.58e-07
ENSG00000159596 TMEM69 -351183 1.26e-06 8.81e-07 3.04e-07 3.04e-07 1.1e-07 3.15e-07 7.02e-07 1.65e-07 8.92e-07 2.85e-07 1.12e-06 6.07e-07 1.48e-06 1.57e-07 4.49e-07 5.87e-07 6.67e-07 4.72e-07 4e-07 3.96e-07 3.24e-07 1.04e-06 5.67e-07 3.12e-07 1.54e-06 2.44e-07 5.49e-07 5.31e-07 6.84e-07 9.25e-07 4.59e-07 4.44e-08 2.29e-07 2.06e-07 3.6e-07 3.32e-07 4.12e-07 1.14e-07 1.11e-07 1.3e-07 1.45e-07 1.36e-06 2.48e-07 2.07e-07 1.87e-07 4.43e-08 1.43e-07 4.85e-08 2.24e-07
ENSG00000186603 HPDL 10093 4.04e-05 3.54e-05 7.01e-06 1.67e-05 7.07e-06 1.7e-05 4.97e-05 6.2e-06 3.81e-05 1.89e-05 4.55e-05 2.14e-05 5.54e-05 1.64e-05 8.33e-06 2.39e-05 2.1e-05 3.05e-05 9.37e-06 7.97e-06 1.94e-05 4.03e-05 3.6e-05 1.04e-05 5.19e-05 1.04e-05 1.75e-05 1.6e-05 3.61e-05 2.73e-05 2.53e-05 1.99e-06 3.57e-06 8.19e-06 1.34e-05 6.81e-06 3.67e-06 3.71e-06 5.9e-06 3.85e-06 1.87e-06 4.09e-05 4.28e-06 4.39e-07 2.88e-06 4.96e-06 4.82e-06 2.25e-06 1.52e-06
ENSG00000188396 \N 530323 4.37e-07 2.67e-07 1.2e-07 2.48e-07 1.01e-07 9.31e-08 3.11e-07 5.89e-08 2.35e-07 1.39e-07 3.21e-07 2.22e-07 4.34e-07 8.44e-08 1.26e-07 1.53e-07 8.42e-08 2.56e-07 1.27e-07 7.4e-08 1.65e-07 2.76e-07 2.33e-07 4.25e-08 3.55e-07 1.76e-07 1.74e-07 1.77e-07 1.76e-07 2.26e-07 1.86e-07 5.4e-08 5.58e-08 9.9e-08 6.87e-08 5.32e-08 1.1e-07 6.98e-08 4.82e-08 5.12e-08 3.17e-08 3.66e-07 6.18e-08 4.19e-08 9.95e-08 8.24e-09 8.94e-08 3.01e-08 8.37e-08
ENSG00000222009 BTBD19 528516 4.37e-07 2.67e-07 1.2e-07 2.48e-07 1.05e-07 1.03e-07 3.25e-07 5.89e-08 2.38e-07 1.39e-07 3.21e-07 2.22e-07 4.34e-07 8.55e-08 1.26e-07 1.53e-07 8.42e-08 2.56e-07 1.27e-07 7.4e-08 1.65e-07 2.86e-07 2.33e-07 4.25e-08 3.55e-07 1.76e-07 1.74e-07 1.85e-07 1.76e-07 2.26e-07 1.86e-07 5.08e-08 5.58e-08 9.9e-08 6.87e-08 5.32e-08 1.05e-07 7.1e-08 4.82e-08 5.12e-08 3.17e-08 3.66e-07 6.18e-08 4.19e-08 9.95e-08 8.24e-09 8.94e-08 3.05e-08 8.44e-08
ENSG00000225447 RPS15AP10 -309199 1.26e-06 9.15e-07 2.87e-07 6.06e-07 1.07e-07 3.58e-07 1.02e-06 2.71e-07 1.2e-06 3.66e-07 1.41e-06 6.08e-07 1.96e-06 2.19e-07 5.65e-07 8.25e-07 8.26e-07 5.48e-07 5.72e-07 6.68e-07 5.61e-07 1.6e-06 7.79e-07 5.39e-07 1.93e-06 2.98e-07 7.06e-07 7.74e-07 1.01e-06 1.11e-06 5.72e-07 9.54e-08 1.88e-07 3.58e-07 4.08e-07 4.69e-07 5.76e-07 1.5e-07 1.94e-07 2.75e-07 2.75e-07 1.46e-06 4.23e-07 1.89e-07 1.9e-07 8.76e-08 1.9e-07 1.45e-07 1.79e-07
ENSG00000234329 AL604028.2 -314828 1.27e-06 9.3e-07 2.95e-07 5.51e-07 9.9e-08 3.2e-07 9.92e-07 2.73e-07 1.15e-06 3.89e-07 1.37e-06 5.79e-07 1.83e-06 2.08e-07 4.91e-07 8.25e-07 7.77e-07 5.65e-07 5.34e-07 6.39e-07 4.86e-07 1.42e-06 7.95e-07 4.83e-07 1.92e-06 2.8e-07 6.88e-07 7.22e-07 9.39e-07 1.09e-06 5.48e-07 7.24e-08 2.19e-07 3.49e-07 3.67e-07 4.47e-07 5.02e-07 1.38e-07 1.51e-07 3.11e-07 2.71e-07 1.51e-06 3.73e-07 1.89e-07 1.66e-07 7.77e-08 1.7e-07 1.43e-07 1.9e-07
ENSG00000280670 CCDC163 -163081 3.39e-06 3.93e-06 8.75e-07 1.95e-06 4.53e-07 7.26e-07 2.33e-06 8.37e-07 3.32e-06 1.43e-06 3.36e-06 2.51e-06 5.43e-06 1.42e-06 1.05e-06 2.43e-06 1.77e-06 2.17e-06 1.56e-06 8.79e-07 2.28e-06 4.42e-06 3.01e-06 1.68e-06 4.32e-06 1.26e-06 1.84e-06 1.44e-06 3.17e-06 2.56e-06 2.05e-06 5.42e-07 7.75e-07 1.27e-06 1.87e-06 9.23e-07 9.82e-07 4.09e-07 1.23e-06 4.26e-07 2.08e-07 5.01e-06 4.73e-07 1.79e-07 4.2e-07 3.62e-07 8.55e-07 5.05e-07 5.81e-07
ENSG00000281912 LINC01144 33088 2.1e-05 2.45e-05 4.41e-06 1.29e-05 3.8e-06 9.07e-06 2.91e-05 3.78e-06 2.31e-05 1.16e-05 2.83e-05 1.13e-05 3.59e-05 9.2e-06 5.5e-06 1.33e-05 1.17e-05 1.92e-05 6e-06 5.4e-06 1.07e-05 2.46e-05 2.19e-05 6.73e-06 3.29e-05 6.09e-06 9.89e-06 9.67e-06 2.25e-05 1.74e-05 1.47e-05 1.62e-06 2.15e-06 5.41e-06 9.27e-06 4.56e-06 2.37e-06 2.87e-06 3.62e-06 2.77e-06 1.64e-06 2.73e-05 2.76e-06 3.24e-07 2.12e-06 2.85e-06 3.3e-06 1.5e-06 1.53e-06