Genes within 1Mb (chr1:45301759:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -189404 eQTL 3.44e-13 -0.109 0.0148 0.0 0.0 0.404
ENSG00000085998 POMGNT1 -918546 eQTL 2.56e-03 -0.0323 0.0107 0.0 0.0 0.404
ENSG00000086015 MAST2 -485228 eQTL 1.93e-09 0.119 0.0197 0.0 0.0 0.404
ENSG00000117450 PRDX1 -221288 eQTL 1.89e-02 0.0276 0.0117 0.0 0.0 0.404
ENSG00000117461 PIK3R3 -831277 eQTL 5.97e-06 0.0928 0.0204 0.0 0.0 0.404
ENSG00000132773 TOE1 -38293 eQTL 7.39e-03 -0.0362 0.0135 0.0 0.0 0.404
ENSG00000142945 KIF2C 561941 eQTL 2.17e-02 0.0392 0.017 0.0 0.0 0.404
ENSG00000142959 BEST4 513589 eQTL 2.57e-02 0.0634 0.0284 0.0 0.0 0.404
ENSG00000159592 GPBP1L1 -386354 eQTL 1.73e-02 0.0259 0.0109 0.0 0.0 0.404
ENSG00000159596 TMEM69 -386422 eQTL 2.90e-04 0.0809 0.0222 0.0 0.0 0.404
ENSG00000222009 BTBD19 493277 eQTL 2.38e-04 -0.055 0.0149 0.0 0.0 0.404
ENSG00000225447 RPS15AP10 -344438 eQTL 2.72e-06 -0.159 0.0337 0.0 0.0 0.404
ENSG00000234093 RPS15AP11 521044 eQTL 2.91e-02 0.0776 0.0355 0.0 0.0 0.404
ENSG00000234329 AL604028.2 -350067 eQTL 3.07e-14 -0.19 0.0246 0.0 0.0 0.404
ENSG00000280670 CCDC163 -198320 eQTL 2.37e-05 0.159 0.0375 0.0 0.0 0.404
ENSG00000281912 LINC01144 -2151 eQTL 6.08e-11 0.222 0.0336 0.0 0.0 0.404


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -189404 4e-06 3.63e-06 6.89e-07 1.88e-06 8.6e-07 8e-07 2.4e-06 1.02e-06 2.76e-06 1.63e-06 3.6e-06 1.95e-06 5.05e-06 1.19e-06 1.07e-06 2e-06 1.57e-06 2.03e-06 1.54e-06 1.1e-06 1.9e-06 3.5e-06 3.17e-06 1.84e-06 4.56e-06 1.29e-06 1.77e-06 1.44e-06 3.78e-06 2.79e-06 2.01e-06 4.71e-07 7.34e-07 1.49e-06 1.74e-06 9.53e-07 9.39e-07 4.65e-07 1.24e-06 3.63e-07 3.48e-07 4.17e-06 5.42e-07 1.96e-07 4.19e-07 3.22e-07 7.69e-07 2.4e-07 2.56e-07
ENSG00000086015 MAST2 -485228 1.26e-06 7.58e-07 1.59e-07 3.81e-07 1.11e-07 3.24e-07 7.02e-07 2.47e-07 7.85e-07 2.69e-07 1.09e-06 5.28e-07 1.07e-06 2.06e-07 4.15e-07 4.19e-07 6.07e-07 4.72e-07 3.01e-07 2.68e-07 2.57e-07 5.71e-07 5.63e-07 3.12e-07 1.39e-06 2.38e-07 4.7e-07 4.71e-07 6.76e-07 7.71e-07 4.47e-07 3.34e-08 1.27e-07 2.04e-07 3.46e-07 2.15e-07 1.97e-07 9.84e-08 8.43e-08 1.56e-08 1.91e-07 8.45e-07 5.78e-08 1.53e-08 1.91e-07 4.53e-08 1.43e-07 5.73e-08 5.4e-08
ENSG00000117461 PIK3R3 -831277 3.27e-07 1.59e-07 6.42e-08 2.25e-07 1.05e-07 8.89e-08 2.5e-07 5.84e-08 1.86e-07 1.11e-07 2.04e-07 1.37e-07 2.38e-07 8.44e-08 6.53e-08 9.48e-08 5.27e-08 2.15e-07 7.29e-08 5.61e-08 1.33e-07 1.81e-07 1.81e-07 4.07e-08 2.36e-07 1.51e-07 1.29e-07 1.47e-07 1.34e-07 1.24e-07 1.27e-07 4.77e-08 4.34e-08 9.08e-08 5.16e-08 3.3e-08 4.54e-08 8.57e-08 6.35e-08 5.35e-08 4.83e-08 1.55e-07 3.99e-08 7.61e-09 3.61e-08 9.44e-09 7.61e-08 2.2e-09 4.67e-08
ENSG00000132773 TOE1 -38293 1.48e-05 1.6e-05 3.15e-06 9.77e-06 3.2e-06 7.51e-06 2.25e-05 3.36e-06 1.66e-05 8.95e-06 2.11e-05 7.98e-06 2.87e-05 6.86e-06 5.16e-06 1.02e-05 8.19e-06 1.43e-05 4.73e-06 4.47e-06 8.78e-06 1.67e-05 1.71e-05 5.59e-06 2.67e-05 5.4e-06 8.04e-06 7.75e-06 1.79e-05 1.57e-05 1.14e-05 1.27e-06 1.88e-06 4.84e-06 7.03e-06 4.06e-06 2.34e-06 2.73e-06 3.22e-06 2.27e-06 1.67e-06 2.02e-05 2.69e-06 3.33e-07 1.98e-06 2.77e-06 3.11e-06 1.38e-06 1.23e-06
ENSG00000142945 KIF2C 561941 8.7e-07 5.67e-07 1.14e-07 3.95e-07 9.16e-08 2.09e-07 5.65e-07 1.55e-07 4.61e-07 2.8e-07 8.08e-07 3.62e-07 7.71e-07 1.48e-07 2.81e-07 2.69e-07 3.52e-07 4.2e-07 2.13e-07 1.73e-07 2.52e-07 4.14e-07 4e-07 1.73e-07 8.33e-07 2.7e-07 2.72e-07 2.98e-07 4.13e-07 5.17e-07 3.38e-07 6.56e-08 5.78e-08 1.4e-07 3.36e-07 1.18e-07 1.02e-07 8.33e-08 6.29e-08 5.25e-08 1.16e-07 5.52e-07 2.92e-08 1.73e-08 1.47e-07 1.46e-08 1.07e-07 1.77e-08 5.76e-08
ENSG00000197429 \N -448891 1.25e-06 8.81e-07 2.81e-07 3.5e-07 1.78e-07 3.12e-07 8.39e-07 2.88e-07 9.42e-07 3.82e-07 1.25e-06 5.75e-07 1.34e-06 2.33e-07 4.6e-07 5.49e-07 7.79e-07 5.27e-07 3.79e-07 4.06e-07 3.39e-07 8.11e-07 6.33e-07 4.22e-07 1.66e-06 2.8e-07 5.49e-07 5.31e-07 8.4e-07 8.63e-07 4.65e-07 3.7e-08 1.73e-07 2.74e-07 3.27e-07 2.96e-07 2.96e-07 1.12e-07 1.14e-07 8.8e-09 2.32e-07 1.12e-06 7.3e-08 5.61e-09 1.7e-07 7.43e-08 1.77e-07 8.49e-08 5.77e-08
ENSG00000222009 BTBD19 493277 1.24e-06 7.46e-07 1.54e-07 4.1e-07 9.23e-08 3.15e-07 6.72e-07 2.28e-07 7.11e-07 2.85e-07 1.07e-06 5.22e-07 1.02e-06 1.98e-07 3.86e-07 3.96e-07 5.63e-07 4.52e-07 2.87e-07 2.76e-07 2.62e-07 5.76e-07 5.41e-07 2.95e-07 1.36e-06 2.41e-07 4.55e-07 4.4e-07 6.33e-07 7.42e-07 4.32e-07 4.1e-08 9.89e-08 1.9e-07 3.69e-07 1.94e-07 1.84e-07 1.02e-07 8.26e-08 2.24e-08 1.67e-07 7.54e-07 5.58e-08 2e-08 1.91e-07 4.43e-08 1.46e-07 4.41e-08 5.26e-08
ENSG00000225447 RPS15AP10 -344438 1.28e-06 1.01e-06 2.57e-07 1.15e-06 3.45e-07 5.92e-07 1.55e-06 3.97e-07 1.45e-06 5.93e-07 1.85e-06 7.43e-07 2.25e-06 2.74e-07 5.36e-07 9.07e-07 8.89e-07 7.72e-07 8.18e-07 6.46e-07 8.13e-07 1.72e-06 8.95e-07 5.77e-07 2.23e-06 6.58e-07 9.18e-07 9.25e-07 1.48e-06 1.34e-06 7.32e-07 2.09e-07 2.89e-07 6.85e-07 5.49e-07 4.46e-07 6.37e-07 2.38e-07 3.78e-07 2.5e-07 2.8e-07 1.64e-06 9.66e-08 4.12e-08 3.17e-07 1.85e-07 2.17e-07 3.77e-08 1.55e-07
ENSG00000234093 RPS15AP11 521044 1.05e-06 6.46e-07 1.31e-07 4.31e-07 1.09e-07 2.64e-07 6.19e-07 1.91e-07 6.27e-07 3.22e-07 1.02e-06 4.55e-07 9.65e-07 1.56e-07 3.31e-07 3.41e-07 5.06e-07 4.39e-07 2.57e-07 1.78e-07 2.55e-07 5.11e-07 4.59e-07 2.29e-07 1.14e-06 2.54e-07 3.93e-07 3.9e-07 5.41e-07 6.47e-07 3.79e-07 5.25e-08 5.95e-08 1.77e-07 3.44e-07 1.44e-07 1.23e-07 1.09e-07 6.74e-08 2.71e-08 1.36e-07 7.04e-07 4.47e-08 1.88e-08 1.94e-07 3.41e-08 1.13e-07 3.01e-08 5.95e-08
ENSG00000234329 AL604028.2 -350067 1.24e-06 9.59e-07 2.63e-07 1.14e-06 3.47e-07 5.26e-07 1.61e-06 3.98e-07 1.49e-06 5.9e-07 1.89e-06 7e-07 2.1e-06 2.87e-07 5.37e-07 9.42e-07 9.2e-07 7.05e-07 8.41e-07 6.33e-07 8.02e-07 1.72e-06 9.11e-07 6.34e-07 2.24e-06 6.42e-07 9.41e-07 8.91e-07 1.47e-06 1.29e-06 7.1e-07 2.06e-07 2.57e-07 6.94e-07 5.87e-07 4.63e-07 6.41e-07 1.92e-07 3.95e-07 2.45e-07 3.06e-07 1.56e-06 9.42e-08 3.39e-08 3.1e-07 1.59e-07 2.24e-07 3.7e-08 1.69e-07
ENSG00000281912 LINC01144 -2151 5.81e-05 5.32e-05 1.3e-05 2.54e-05 1.18e-05 2.64e-05 7.94e-05 1.05e-05 6.48e-05 3.63e-05 8.56e-05 3.38e-05 9.35e-05 2.84e-05 1.44e-05 4.35e-05 3.66e-05 5.03e-05 1.58e-05 1.74e-05 3.42e-05 6.97e-05 5.59e-05 2.16e-05 8.54e-05 2.06e-05 2.97e-05 2.82e-05 5.88e-05 5.99e-05 4.25e-05 5.49e-06 8.32e-06 1.54e-05 2.27e-05 1.24e-05 7.97e-06 9.14e-06 1.21e-05 7.02e-06 3.66e-06 5.91e-05 6.88e-06 1.38e-06 6.71e-06 1e-05 9.22e-06 5.45e-06 3.93e-06