Genes within 1Mb (chr1:45299851:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -191312 eQTL 1.58e-02 0.0504 0.0208 0.0 0.0 0.151
ENSG00000085998 POMGNT1 -920454 eQTL 2.09e-03 0.0452 0.0147 0.00291 0.00136 0.151
ENSG00000117450 PRDX1 -223196 eQTL 1.97e-03 -0.0499 0.0161 0.0 0.0 0.151
ENSG00000126088 UROD 288901 pQTL 1.11e-17 -0.169 0.0195 0.0 0.0 0.155
ENSG00000126088 UROD 288901 eQTL 2.86e-07 -0.148 0.0287 0.0 0.0 0.151
ENSG00000132773 TOE1 -40201 eQTL 1.76e-02 0.044 0.0185 0.0 0.0 0.151
ENSG00000132781 MUTYH -40619 eQTL 3.80e-02 0.0382 0.0184 0.0 0.0 0.151
ENSG00000142945 KIF2C 560033 eQTL 4.02e-04 -0.0828 0.0233 0.0 0.0 0.151
ENSG00000159596 TMEM69 -388330 eQTL 4.60e-02 -0.0613 0.0307 0.0 0.0 0.151
ENSG00000173846 PLK3 499474 eQTL 1.54e-06 -0.0763 0.0158 0.0 0.0 0.151
ENSG00000188396 TCTEX1D4 493176 eQTL 4.75e-02 -0.037 0.0187 0.0 0.0 0.151
ENSG00000222009 BTBD19 491369 eQTL 1.77e-02 0.0488 0.0206 0.0 0.0 0.151
ENSG00000234329 AL604028.2 -351975 eQTL 2.39e-03 0.105 0.0346 0.0 0.0 0.151
ENSG00000280670 CCDC163 -200228 eQTL 3.89e-02 -0.107 0.0519 0.0 0.0 0.151
ENSG00000281912 LINC01144 -4059 eQTL 2.20e-02 -0.108 0.047 0.0 0.0 0.151


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126088 UROD 288901 2.16e-06 2.24e-06 3.14e-07 1.18e-06 3.95e-07 6.42e-07 1.48e-06 3.62e-07 1.44e-06 6.05e-07 1.95e-06 6.61e-07 2.53e-06 3.36e-07 3.31e-07 9.48e-07 9.36e-07 7.89e-07 6.6e-07 5.88e-07 8.07e-07 1.96e-06 1.05e-06 5.57e-07 2.49e-06 4.17e-07 1.01e-06 8.09e-07 1.48e-06 1.21e-06 8.1e-07 2.86e-07 2.9e-07 6.06e-07 5.91e-07 4.91e-07 5.04e-07 2.88e-07 4.2e-07 3.02e-07 1.91e-07 1.58e-06 3.86e-07 4.19e-08 2.8e-07 3.1e-07 2.29e-07 1.27e-07 2.05e-07
ENSG00000132781 MUTYH -40619 1.86e-05 2.13e-05 2.86e-06 1.11e-05 2.45e-06 7.21e-06 2.18e-05 2.68e-06 1.64e-05 8.56e-06 2.09e-05 7.45e-06 2.87e-05 6.86e-06 5.23e-06 9.71e-06 8.19e-06 1.23e-05 4.54e-06 4.17e-06 7.95e-06 1.7e-05 1.64e-05 4.94e-06 2.63e-05 5.1e-06 8.02e-06 7.35e-06 1.66e-05 1.43e-05 1.19e-05 9.94e-07 1.38e-06 4.02e-06 6.89e-06 3.47e-06 1.74e-06 2.4e-06 2.42e-06 1.96e-06 9.3e-07 2.31e-05 2.46e-06 1.7e-07 1.03e-06 2.84e-06 2.51e-06 7.3e-07 8.01e-07
ENSG00000142945 KIF2C 560033 8.43e-07 4.24e-07 6.42e-08 2.87e-07 1.07e-07 1.32e-07 3.42e-07 6.2e-08 2.04e-07 1.28e-07 2.47e-07 1.57e-07 4.05e-07 9.15e-08 1.45e-07 1.14e-07 8.53e-08 2.56e-07 9.19e-08 1.08e-07 1.39e-07 2.3e-07 2.11e-07 4.81e-08 3.14e-07 1.65e-07 1.74e-07 1.46e-07 1.47e-07 1.8e-07 1.71e-07 7.41e-08 5.75e-08 1.21e-07 1.29e-07 5.41e-08 5.62e-08 6.2e-08 4.83e-08 6.92e-08 5.59e-08 2.15e-07 5.78e-08 2.05e-08 6.59e-08 1.46e-08 7e-08 3.04e-09 5.16e-08
ENSG00000173846 PLK3 499474 1.11e-06 6.42e-07 7.6e-08 3.66e-07 9.26e-08 1.77e-07 4.53e-07 8.11e-08 2.78e-07 2.01e-07 4.13e-07 2.22e-07 6.08e-07 1.1e-07 2.44e-07 1.61e-07 2.07e-07 3.12e-07 1.69e-07 1.76e-07 1.91e-07 3.13e-07 3.02e-07 1.13e-07 4.88e-07 2e-07 2.52e-07 1.85e-07 2.31e-07 2.89e-07 2.19e-07 5.88e-08 4.28e-08 1.36e-07 2.7e-07 7.98e-08 8.75e-08 7.53e-08 5.86e-08 7.65e-08 4.42e-08 3.06e-07 6.23e-08 1.85e-08 1.01e-07 4.53e-08 9.1e-08 1.22e-08 5.43e-08