Genes within 1Mb (chr1:45284323:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -206840 eQTL 3.72e-03 -0.0768 0.0264 0.0 0.0 0.0952
ENSG00000085999 RAD54L -963365 eQTL 4.06e-02 -0.0717 0.035 0.0 0.0 0.0952
ENSG00000117461 PIK3R3 -848713 eQTL 7.40e-03 0.096 0.0358 0.0 0.0 0.0952
ENSG00000126088 UROD 273373 pQTL 9.50e-06 0.112 0.0251 0.0 0.0 0.0936
ENSG00000126088 UROD 273373 eQTL 9.94e-06 0.162 0.0366 0.0 0.0 0.0952
ENSG00000126106 TMEM53 609842 eQTL 9.53e-02 -0.0765 0.0458 0.00178 0.0 0.0952
ENSG00000132781 MUTYH -56147 eQTL 2.17e-04 -0.0863 0.0232 0.00167 0.00129 0.0952
ENSG00000142945 KIF2C 544505 eQTL 3.07e-02 -0.0643 0.0297 0.0 0.0 0.0952
ENSG00000159588 CCDC17 -339734 eQTL 1.09e-02 0.0641 0.0252 0.0 0.0 0.0952
ENSG00000159596 TMEM69 -403858 eQTL 3.46e-02 0.0824 0.039 0.0 0.0 0.0952
ENSG00000162415 ZSWIM5 -21886 eQTL 6.81e-03 -0.101 0.0372 0.0 0.0 0.0952
ENSG00000173846 PLK3 483946 eQTL 3.71e-03 0.0587 0.0202 0.00175 0.0 0.0952
ENSG00000222009 BTBD19 475841 eQTL 4.99e-08 -0.142 0.0258 0.0 0.0 0.0952
ENSG00000225447 RPS15AP10 -361874 eQTL 1.77e-02 -0.141 0.0592 0.0 0.0 0.0952
ENSG00000234329 AL604028.2 -367503 eQTL 1.36e-03 -0.141 0.0439 0.0 0.0 0.0952
ENSG00000281912 LINC01144 -19587 eQTL 1.67e-02 -0.143 0.0596 0.0 0.0 0.0952


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -206840 1.39e-06 1.33e-06 2.84e-07 1.29e-06 3.81e-07 6.36e-07 1.41e-06 4.13e-07 1.75e-06 6.94e-07 2.01e-06 1.01e-06 2.57e-06 3.95e-07 4.81e-07 1.02e-06 9.41e-07 1.1e-06 6.6e-07 5.13e-07 7.61e-07 1.98e-06 1.27e-06 6.41e-07 2.34e-06 7.75e-07 1.01e-06 8.48e-07 1.62e-06 1.32e-06 8.49e-07 2.56e-07 2.76e-07 5.5e-07 5.82e-07 5.62e-07 7.71e-07 2.97e-07 4.78e-07 2.8e-07 2.96e-07 2.17e-06 3.44e-07 1.41e-07 3.65e-07 2.33e-07 2.41e-07 1.39e-07 2.79e-07
ENSG00000117419 \N 929063 2.67e-07 1.16e-07 3.71e-08 1.82e-07 8.83e-08 9.87e-08 1.42e-07 5.19e-08 1.41e-07 4.57e-08 1.62e-07 8.14e-08 1.41e-07 6.38e-08 5.84e-08 7.17e-08 3.9e-08 1.18e-07 5.21e-08 4.2e-08 1.05e-07 1.23e-07 1.34e-07 4.05e-08 1.32e-07 1.16e-07 1.08e-07 9.32e-08 1.05e-07 1.1e-07 9.91e-08 4.22e-08 3.26e-08 8.65e-08 8.98e-08 3.76e-08 5.06e-08 9.62e-08 7.52e-08 3.01e-08 4.57e-08 1.33e-07 4.52e-08 2.1e-08 5.75e-08 1.67e-08 1.24e-07 3.92e-09 4.85e-08
ENSG00000126088 UROD 273373 1.33e-06 9.23e-07 3.03e-07 7e-07 2.46e-07 4.63e-07 1.21e-06 3.46e-07 1.24e-06 4.03e-07 1.48e-06 5.79e-07 1.99e-06 2.78e-07 4.26e-07 7.78e-07 7.74e-07 5.47e-07 5.36e-07 5.57e-07 4.43e-07 1.19e-06 8.95e-07 6.25e-07 1.96e-06 3.71e-07 7.31e-07 6.51e-07 1.05e-06 1.22e-06 5.88e-07 3.9e-08 2.17e-07 5.45e-07 4.31e-07 4.66e-07 4.77e-07 1.36e-07 1.73e-07 4.09e-08 2.45e-07 1.52e-06 5e-08 4.2e-08 1.55e-07 9.77e-08 2.1e-07 7.81e-08 1.09e-07
ENSG00000132781 MUTYH -56147 6.69e-06 8.73e-06 1.13e-06 3.95e-06 1.84e-06 2.67e-06 9.41e-06 1.52e-06 5.94e-06 4.1e-06 9.93e-06 4.15e-06 1.14e-05 3.53e-06 1.52e-06 5.39e-06 3.72e-06 4.19e-06 2.19e-06 2.44e-06 3.66e-06 7.72e-06 5.82e-06 2.76e-06 1.07e-05 2.81e-06 3.96e-06 2.43e-06 6.95e-06 7.71e-06 4.12e-06 5.83e-07 8.3e-07 2.75e-06 2.89e-06 2.09e-06 1.44e-06 1.42e-06 1.26e-06 8.61e-07 8.2e-07 9.19e-06 1.04e-06 1.32e-07 7.56e-07 1.04e-06 9.16e-07 7.11e-07 4.82e-07
ENSG00000159588 CCDC17 -339734 1.21e-06 8.16e-07 1.54e-07 3.81e-07 9.61e-08 3.08e-07 7.02e-07 2.28e-07 7.85e-07 3.11e-07 1.09e-06 5.28e-07 1.2e-06 2.1e-07 3.31e-07 4.14e-07 5.55e-07 4.65e-07 3.01e-07 1.87e-07 2.41e-07 5.83e-07 5.41e-07 3.21e-07 1.46e-06 2.53e-07 4.9e-07 3.9e-07 5.9e-07 8.5e-07 4.59e-07 5.71e-08 4.92e-08 2.06e-07 3.32e-07 2.59e-07 1.82e-07 1.26e-07 7.99e-08 2.83e-08 1.18e-07 1.02e-06 7.3e-08 1.23e-08 1.8e-07 3.92e-08 1.54e-07 4.41e-08 5.18e-08
ENSG00000222009 BTBD19 475841 5.14e-07 2.67e-07 8.02e-08 2.66e-07 1.07e-07 1.26e-07 3.7e-07 7.79e-08 2.6e-07 1.6e-07 3.66e-07 2.09e-07 4.54e-07 9.18e-08 9.33e-08 1.46e-07 8.74e-08 2.93e-07 9.71e-08 8.87e-08 1.59e-07 2.48e-07 2.56e-07 7.94e-08 4.46e-07 2.01e-07 1.83e-07 1.7e-07 1.98e-07 2.97e-07 1.93e-07 5.24e-08 4.98e-08 1.15e-07 1.33e-07 5.32e-08 6.39e-08 5.53e-08 4.99e-08 7.17e-08 4.79e-08 3.26e-07 2.32e-08 2.07e-08 8.24e-08 8.42e-09 9.34e-08 2.75e-09 5.49e-08
ENSG00000281912 LINC01144 -19587 1.4e-05 1.62e-05 3.05e-06 9.77e-06 2.7e-06 6.77e-06 2.07e-05 3.01e-06 1.59e-05 7.65e-06 2.06e-05 7.82e-06 2.87e-05 6.24e-06 4.71e-06 9.44e-06 8.09e-06 1.32e-05 4.36e-06 4.28e-06 7.96e-06 1.5e-05 1.58e-05 5.33e-06 2.61e-05 5.34e-06 7.92e-06 6.89e-06 1.66e-05 1.7e-05 1.09e-05 1.27e-06 1.55e-06 4.56e-06 7.03e-06 4.22e-06 2.04e-06 2.7e-06 3.24e-06 2.18e-06 1.55e-06 2.01e-05 2.45e-06 3.05e-07 1.87e-06 2.52e-06 2.53e-06 1.24e-06 1.15e-06