Genes within 1Mb (chr1:45243144:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -248019 eQTL 2.51e-02 0.0457 0.0204 0.0 0.0 0.16
ENSG00000085998 POMGNT1 -977161 eQTL 3.25e-03 0.0423 0.0143 0.00211 0.0 0.16
ENSG00000117450 PRDX1 -279903 eQTL 2.09e-03 -0.0485 0.0157 0.0 0.0 0.16
ENSG00000126088 UROD 232194 pQTL 4.59e-22 -0.185 0.0188 0.0 0.0 0.165
ENSG00000126088 UROD 232194 eQTL 3.28e-10 -0.177 0.0279 0.0 0.0 0.16
ENSG00000132773 TOE1 -96908 eQTL 2.46e-02 0.0407 0.0181 0.0 0.0 0.16
ENSG00000142945 KIF2C 503326 eQTL 9.29e-05 -0.0892 0.0227 0.0 0.0 0.16
ENSG00000173846 PLK3 442767 eQTL 2.37e-07 -0.0801 0.0154 0.0 0.0 0.16
ENSG00000188396 TCTEX1D4 436469 eQTL 3.74e-02 -0.038 0.0182 0.0 0.0 0.16
ENSG00000222009 BTBD19 434662 eQTL 2.61e-03 0.0605 0.02 0.0 0.0 0.16
ENSG00000234329 AL604028.2 -408682 eQTL 5.77e-03 0.0936 0.0338 0.0 0.0 0.16
ENSG00000280670 CCDC163 -256935 eQTL 4.19e-02 -0.103 0.0507 0.0 0.0 0.16
ENSG00000281912 LINC01144 -60766 eQTL 1.34e-02 -0.114 0.0459 0.0 0.0 0.16


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126088 UROD 232194 1.58e-06 1.33e-06 2.87e-07 1.21e-06 3.82e-07 6.46e-07 1.41e-06 4.04e-07 1.77e-06 6.28e-07 2.04e-06 9.21e-07 2.6e-06 3.41e-07 4.76e-07 9.55e-07 1.02e-06 1.08e-06 6.75e-07 4.38e-07 7.6e-07 1.91e-06 1.13e-06 5.73e-07 2.43e-06 7.43e-07 1.03e-06 8.98e-07 1.63e-06 1.26e-06 7.8e-07 2.85e-07 2.8e-07 5.87e-07 5.52e-07 5.08e-07 6.93e-07 2.95e-07 4.87e-07 2.11e-07 3.03e-07 2.01e-06 2.92e-07 1.14e-07 3.17e-07 2.31e-07 2.26e-07 6.05e-08 1.98e-07
ENSG00000132781 \N -97326 5.11e-06 5.05e-06 7.32e-07 3.14e-06 1.66e-06 1.5e-06 5.6e-06 9.79e-07 5.09e-06 2.4e-06 5.7e-06 3.33e-06 7.38e-06 1.97e-06 1.33e-06 3.81e-06 1.96e-06 3.75e-06 1.55e-06 1.19e-06 3.09e-06 4.95e-06 4.58e-06 1.46e-06 7.48e-06 1.94e-06 2.45e-06 1.78e-06 4.46e-06 4.98e-06 2.81e-06 5.42e-07 5.02e-07 1.66e-06 2.23e-06 1.18e-06 9.63e-07 4.24e-07 8.1e-07 4.71e-07 6.13e-07 5.98e-06 4.01e-07 1.63e-07 6.36e-07 9.32e-07 1.04e-06 4.59e-07 3.29e-07
ENSG00000142945 KIF2C 503326 7.76e-07 3.55e-07 1.05e-07 3.56e-07 9.93e-08 1.64e-07 4.25e-07 8.86e-08 2.78e-07 1.78e-07 4.13e-07 2.55e-07 5.39e-07 1.01e-07 1.45e-07 1.75e-07 1.38e-07 3.39e-07 1.55e-07 9.01e-08 1.61e-07 2.76e-07 2.77e-07 1.15e-07 5.15e-07 2.29e-07 2.22e-07 1.95e-07 2.66e-07 3.71e-07 1.95e-07 8.14e-08 6.08e-08 1.15e-07 2.32e-07 6.85e-08 8.87e-08 6.67e-08 6.08e-08 6.05e-08 5.38e-08 3.73e-07 1.67e-08 1.7e-08 1.17e-07 1.37e-08 9.73e-08 2.99e-09 5.71e-08
ENSG00000173846 PLK3 442767 9.47e-07 5.7e-07 1.27e-07 3.96e-07 9.29e-08 2.24e-07 5.49e-07 1.38e-07 4.26e-07 2.39e-07 6.88e-07 3.65e-07 7.53e-07 1.41e-07 2.26e-07 2.45e-07 3.13e-07 4.11e-07 2.17e-07 1.65e-07 1.97e-07 3.87e-07 3.7e-07 1.73e-07 7.94e-07 2.49e-07 3.04e-07 2.7e-07 3.99e-07 5.99e-07 2.93e-07 6.06e-08 4.49e-08 1.49e-07 3.08e-07 1.02e-07 1.11e-07 7.93e-08 6.29e-08 2.71e-08 9.84e-08 5.87e-07 4.24e-08 1.95e-08 1.58e-07 1.31e-08 1.01e-07 1.18e-08 5.13e-08