Genes within 1Mb (chr1:45168124:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -323039 eQTL 1.15e-05 -0.0803 0.0182 0.0 0.0 0.197
ENSG00000126088 UROD 157174 pQTL 3.96e-33 -0.208 0.0169 0.0 0.0 0.199
ENSG00000126088 UROD 157174 eQTL 2.70e-17 -0.213 0.0246 0.0 0.0 0.197
ENSG00000142945 KIF2C 428306 eQTL 4.55e-02 -0.0412 0.0206 0.0 0.0 0.197
ENSG00000159596 TMEM69 -520057 eQTL 3.93e-07 0.136 0.0267 0.0 0.0 0.197
ENSG00000162415 ZSWIM5 -138085 eQTL 4.53e-02 0.0517 0.0258 0.0 0.0 0.197
ENSG00000173846 PLK3 367747 eQTL 8.00e-03 -0.0372 0.014 0.0 0.0 0.197
ENSG00000188396 TCTEX1D4 361449 eQTL 8.09e-03 0.0435 0.0164 0.0 0.0 0.197
ENSG00000198520 ARMH1 493411 eQTL 1.91e-06 -0.103 0.0216 0.00151 0.00127 0.197
ENSG00000234329 AL604028.2 -483702 eQTL 8.04e-04 -0.102 0.0304 0.0 0.0 0.197


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126088 UROD 157174 4.02e-06 3.7e-06 8.35e-07 2.43e-06 1.2e-06 1.55e-06 2.92e-06 8.5e-07 2.47e-06 1.66e-06 3.25e-06 2.2e-06 5.69e-06 2.25e-06 1.03e-06 2.23e-06 1.82e-06 2.36e-06 1.47e-06 9.69e-07 2.16e-06 3.5e-06 3.42e-06 1.71e-06 4.97e-06 1.17e-06 1.9e-06 1.5e-06 3.77e-06 4.36e-06 2e-06 5.58e-07 5.47e-07 1.58e-06 1.96e-06 8.88e-07 9.91e-07 5.42e-07 1.06e-06 5.64e-07 7.18e-07 3.95e-06 4.73e-07 1.64e-07 3.47e-07 5.87e-07 1.01e-06 3.19e-07 1.94e-07
ENSG00000126107 \N 156800 4e-06 3.66e-06 8.35e-07 2.39e-06 1.21e-06 1.55e-06 2.93e-06 8.52e-07 2.51e-06 1.62e-06 3.34e-06 2.28e-06 5.67e-06 2.3e-06 1.02e-06 2.23e-06 1.82e-06 2.38e-06 1.5e-06 9.5e-07 2.2e-06 3.46e-06 3.3e-06 1.71e-06 4.9e-06 1.21e-06 1.9e-06 1.5e-06 3.81e-06 4.43e-06 2.03e-06 5.58e-07 5.47e-07 1.58e-06 1.97e-06 8.52e-07 9.91e-07 5.58e-07 1.06e-06 5.64e-07 7.18e-07 3.83e-06 4.91e-07 1.68e-07 3.47e-07 5.87e-07 1.01e-06 3.19e-07 1.94e-07
ENSG00000142945 KIF2C 428306 8.85e-07 4.24e-07 2.01e-07 4.32e-07 9.33e-08 2.95e-07 5.65e-07 7.98e-08 3.17e-07 2.34e-07 4.88e-07 3.21e-07 7.53e-07 1.56e-07 2.15e-07 2.14e-07 2.48e-07 3.79e-07 3.74e-07 2.25e-07 2.38e-07 3.76e-07 3.7e-07 2.17e-07 7.94e-07 2.4e-07 2.94e-07 2.71e-07 3.86e-07 8.89e-07 2.83e-07 4.31e-08 1.31e-07 1.77e-07 3.01e-07 1.16e-07 2.46e-07 1.61e-07 7.9e-08 8.85e-09 2.8e-07 3.26e-07 5.37e-08 2.66e-08 1.67e-07 1.52e-08 1.73e-07 3.17e-08 5.76e-08
ENSG00000159596 TMEM69 -520057 5.74e-07 1.92e-07 1.11e-07 2.87e-07 1.05e-07 1.57e-07 3.57e-07 5.78e-08 1.98e-07 1.39e-07 2.18e-07 1.62e-07 4.05e-07 1.07e-07 9.12e-08 1.14e-07 8.42e-08 2.66e-07 2.13e-07 1.17e-07 1.76e-07 2.24e-07 2.2e-07 9.63e-08 3.7e-07 1.76e-07 1.74e-07 1.7e-07 1.87e-07 5.36e-07 1.71e-07 6.13e-08 5.31e-08 1.18e-07 1.27e-07 5.05e-08 1.11e-07 1.02e-07 5.54e-08 3.58e-08 1.67e-07 1.62e-07 5.09e-08 5.68e-09 9.95e-08 1.32e-08 1.24e-07 3.3e-09 5.16e-08
ENSG00000188396 TCTEX1D4 361449 1.25e-06 6.99e-07 3.2e-07 3.77e-07 1.19e-07 4.12e-07 7.54e-07 1.48e-07 6.18e-07 3.11e-07 1.02e-06 5.08e-07 1.21e-06 2.54e-07 3.72e-07 3.96e-07 5.63e-07 4.52e-07 6.91e-07 4.71e-07 2.97e-07 5.76e-07 5.41e-07 4.44e-07 1.52e-06 2.49e-07 5.04e-07 4.23e-07 6.76e-07 1.22e-06 4.39e-07 1.29e-07 1.98e-07 3.51e-07 3.39e-07 2.76e-07 4.75e-07 2.44e-07 1.46e-07 1.17e-07 2.69e-07 6.19e-07 1.37e-07 8.04e-08 1.81e-07 7.29e-08 2.14e-07 8.66e-08 5.32e-08
ENSG00000198520 ARMH1 493411 6.8e-07 2.5e-07 1.24e-07 3.58e-07 1.05e-07 1.74e-07 4.14e-07 5.84e-08 2.12e-07 1.6e-07 2.68e-07 1.91e-07 4.74e-07 1.1e-07 1.18e-07 1.39e-07 9.3e-08 2.9e-07 2.65e-07 1.43e-07 1.86e-07 2.48e-07 2.56e-07 1.17e-07 4.54e-07 1.9e-07 1.87e-07 1.86e-07 2.19e-07 6.35e-07 1.88e-07 6.77e-08 4.57e-08 1.21e-07 1.69e-07 5.7e-08 1.01e-07 1.26e-07 3.82e-08 2.65e-08 2.12e-07 1.79e-07 6.3e-08 1.21e-08 1.17e-07 1.84e-08 1.27e-07 1.17e-08 5.61e-08