Genes within 1Mb (chr1:45162532:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -328631 eQTL 3.55e-01 -0.0229 0.0247 0.00134 0.0 0.112
ENSG00000086015 MAST2 -624455 eQTL 3.95e-02 0.0671 0.0326 0.0 0.0 0.112
ENSG00000126088 UROD 151582 pQTL 6.12e-04 0.0836 0.0243 0.0 0.0 0.112
ENSG00000126106 TMEM53 488051 eQTL 5.15e-03 0.119 0.0426 0.00128 0.0 0.112
ENSG00000132773 TOE1 -177520 eQTL 2.28e-02 -0.0499 0.0219 0.0 0.0 0.112
ENSG00000142945 KIF2C 422714 eQTL 1.06e-19 0.247 0.0266 0.0 0.0 0.112
ENSG00000222009 BTBD19 354050 eQTL 9.64e-03 0.063 0.0243 0.0 0.0 0.112
ENSG00000234329 AL604028.2 -489294 eQTL 1.71e-02 -0.098 0.041 0.0 0.0 0.112
ENSG00000280670 CCDC163 -337547 eQTL 1.12e-03 -0.2 0.0612 0.0 0.0 0.112
ENSG00000281912 LINC01144 -141378 eQTL 3.05e-05 0.232 0.0553 0.0 0.0 0.112


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000132763 \N -337768 1.42e-06 1.92e-06 2.74e-07 1.21e-06 3.5e-07 6.12e-07 1.38e-06 3.49e-07 1.5e-06 5.93e-07 2.04e-06 7.32e-07 2.61e-06 4.66e-07 3.4e-07 9.17e-07 1.19e-06 1.1e-06 6.79e-07 7.04e-07 7e-07 1.81e-06 1.76e-06 5.43e-07 2.44e-06 6.73e-07 9.36e-07 7.26e-07 1.66e-06 1.61e-06 7.47e-07 1.55e-07 2.17e-07 5.53e-07 5.21e-07 4.56e-07 4.21e-07 2.15e-07 3.43e-07 1.54e-07 1.01e-07 1.62e-06 4.79e-07 2.07e-07 2.88e-07 1.22e-07 2.21e-07 5.32e-08 7.91e-08
ENSG00000142945 KIF2C 422714 1.22e-06 9.07e-07 3.35e-07 3.55e-07 1.54e-07 3.58e-07 1.64e-06 1.54e-07 8.29e-07 2.67e-07 1.25e-06 5.22e-07 1.59e-06 2.59e-07 4.35e-07 3.79e-07 9.41e-07 5.8e-07 4.7e-07 1.89e-07 3.99e-07 7.26e-07 9.01e-07 3.32e-07 1.95e-06 2.47e-07 5.49e-07 3.18e-07 1.04e-06 1.24e-06 4.32e-07 5.45e-08 5.75e-08 1.77e-07 3.39e-07 2.54e-07 1.09e-07 1.27e-07 7.5e-08 1.57e-08 4.51e-08 9.76e-07 1.39e-07 1.32e-07 1.83e-07 5.94e-08 1.47e-07 7.28e-08 4.71e-08
ENSG00000222009 BTBD19 354050 1.27e-06 1.33e-06 2.43e-07 1.2e-06 3.46e-07 6.31e-07 1.31e-06 3.45e-07 1.46e-06 5.06e-07 1.84e-06 6.16e-07 2.55e-06 3.34e-07 4.85e-07 8.25e-07 1.05e-06 1.02e-06 8.2e-07 6.2e-07 7.6e-07 1.63e-06 1.54e-06 6.35e-07 2.43e-06 4.83e-07 9.34e-07 5.78e-07 1.63e-06 1.39e-06 6.52e-07 7.24e-08 2.31e-07 4.57e-07 5.8e-07 4.52e-07 3.4e-07 1.7e-07 2.44e-07 8.76e-08 8.35e-08 1.55e-06 4.11e-07 1.91e-07 2.47e-07 1.22e-07 2.26e-07 8.25e-08 5.39e-08
ENSG00000234329 AL604028.2 -489294 9.36e-07 6.99e-07 1.87e-07 3.99e-07 1.07e-07 2.46e-07 9.43e-07 8.17e-08 4.18e-07 2.43e-07 9e-07 3.27e-07 1.02e-06 1.76e-07 3.56e-07 2.08e-07 8.43e-07 4.25e-07 2.88e-07 1.08e-07 2.41e-07 3.95e-07 5.82e-07 1.61e-07 1.3e-06 2.7e-07 3.04e-07 1.88e-07 5.43e-07 9.2e-07 2.55e-07 7.41e-08 5.77e-08 1.16e-07 3e-07 8.32e-08 8.87e-08 8.33e-08 4.04e-08 6.05e-08 5.94e-08 4.82e-07 5.45e-08 8.1e-08 1.45e-07 1.37e-08 1.1e-07 2.25e-08 4.74e-08
ENSG00000280670 CCDC163 -337547 1.43e-06 1.92e-06 2.74e-07 1.2e-06 3.53e-07 6.12e-07 1.38e-06 3.49e-07 1.5e-06 6.19e-07 2.04e-06 7.32e-07 2.61e-06 4.66e-07 3.4e-07 9.17e-07 1.19e-06 1.09e-06 6.6e-07 7.04e-07 7e-07 1.81e-06 1.76e-06 5.59e-07 2.39e-06 6.73e-07 9.36e-07 7.26e-07 1.66e-06 1.61e-06 7.47e-07 1.55e-07 2.17e-07 5.53e-07 5.23e-07 4.56e-07 4.21e-07 2.15e-07 3.43e-07 1.54e-07 1.01e-07 1.58e-06 4.81e-07 2.07e-07 2.88e-07 1.22e-07 2.21e-07 5.32e-08 7.91e-08
ENSG00000281912 LINC01144 -141378 7.94e-06 1.16e-05 1.04e-06 5e-06 1.9e-06 3.71e-06 1.22e-05 1.28e-06 7.75e-06 4.29e-06 1.05e-05 4.64e-06 1.36e-05 3.95e-06 1.79e-06 5.06e-06 4.99e-06 5.6e-06 2.28e-06 1.68e-06 3.66e-06 7.65e-06 1.03e-05 2.06e-06 1.61e-05 2.25e-06 3.96e-06 1.76e-06 1.1e-05 7.86e-06 4.54e-06 4.17e-07 5.04e-07 1.82e-06 3.19e-06 1.31e-06 9.78e-07 4.36e-07 1.12e-06 5.64e-07 2.38e-07 1.24e-05 1.26e-06 1.68e-07 7.12e-07 1.1e-06 1.12e-06 5.21e-07 3.43e-07