Genes within 1Mb (chr1:45124234:A:G):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -366929 sc-eQTL 2.25e-01 0.254 0.208 0.063 PB L2
ENSG00000070785 EIF2B3 137512 sc-eQTL 5.55e-01 -0.105 0.178 0.063 PB L2
ENSG00000086015 MAST2 -662753 sc-eQTL 5.50e-01 -0.134 0.223 0.063 PB L2
ENSG00000117419 ERI3 768974 sc-eQTL 4.43e-01 0.167 0.216 0.063 PB L2
ENSG00000117425 PTCH2 280981 sc-eQTL 2.13e-01 -0.254 0.203 0.063 PB L2
ENSG00000117448 AKR1A1 -426309 sc-eQTL 6.30e-01 -0.0557 0.115 0.063 PB L2
ENSG00000117450 PRDX1 -398813 sc-eQTL 8.31e-01 0.0224 0.104 0.063 PB L2
ENSG00000126088 UROD 113284 sc-eQTL 1.96e-01 -0.201 0.155 0.063 PB L2
ENSG00000126106 TMEM53 449753 sc-eQTL 9.16e-01 -0.0219 0.208 0.063 PB L2
ENSG00000126107 HECTD3 112910 sc-eQTL 1.47e-01 0.249 0.171 0.063 PB L2
ENSG00000132773 TOE1 -215818 sc-eQTL 6.80e-01 0.0916 0.222 0.063 PB L2
ENSG00000132780 NASP -459612 sc-eQTL 4.03e-01 -0.194 0.231 0.063 PB L2
ENSG00000132781 MUTYH -216659 sc-eQTL 5.00e-01 0.164 0.242 0.063 PB L2
ENSG00000142937 RPS8 348983 sc-eQTL 4.23e-01 -0.0931 0.116 0.063 PB L2
ENSG00000159592 GPBP1L1 -563879 sc-eQTL 6.01e-02 0.448 0.236 0.063 PB L2
ENSG00000159596 TMEM69 -563947 sc-eQTL 8.23e-01 0.0449 0.2 0.063 PB L2
ENSG00000173846 PLK3 323857 sc-eQTL 8.09e-01 -0.0517 0.213 0.063 PB L2
ENSG00000178028 DMAP1 910779 sc-eQTL 7.99e-01 0.063 0.247 0.063 PB L2
ENSG00000187147 RNF220 719040 sc-eQTL 9.75e-01 0.00634 0.205 0.063 PB L2
ENSG00000197429 IPP -626419 sc-eQTL 6.04e-01 0.118 0.227 0.063 PB L2
ENSG00000198520 ARMH1 449542 sc-eQTL 9.87e-01 -0.00298 0.187 0.063 PB L2
ENSG00000280670 CCDC163 -375845 sc-eQTL 7.08e-01 -0.0672 0.179 0.063 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117425 PTCH2 280981 eQTL 0.027 0.129 0.0583 0.00116 0.0 0.0407
ENSG00000126088 UROD 113284 pQTL 0.00363 0.105 0.0362 0.0 0.0 0.0434
ENSG00000126088 UROD 113284 eQTL 3.71e-06 0.236 0.0508 0.0 0.00306 0.0407
ENSG00000126107 HECTD3 112910 eQTL 0.0115 0.104 0.0412 0.0 0.0 0.0407
ENSG00000188396 TCTEX1D4 317559 eQTL 0.00639 -0.0898 0.0329 0.0 0.0 0.0407
ENSG00000198520 ARMH1 449521 eQTL 0.000857 0.146 0.0436 0.00285 0.00106 0.0407
ENSG00000222009 BTBD19 315752 eQTL 3.87e-05 -0.149 0.036 0.0 0.0 0.0407
ENSG00000281912 LINC01144 -179676 eQTL 0.0136 0.205 0.0829 0.0 0.0 0.0407


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N -366929 1.31e-06 8.16e-07 1.59e-07 4.06e-07 1.18e-07 3.41e-07 6.87e-07 2.74e-07 8.36e-07 3.05e-07 1.09e-06 5.35e-07 1.2e-06 1.84e-07 3.61e-07 4.29e-07 6.29e-07 5.16e-07 3.26e-07 2.73e-07 2.38e-07 5.71e-07 5.41e-07 3.29e-07 1.46e-06 2.48e-07 4.71e-07 3.88e-07 6.91e-07 8.56e-07 4.39e-07 4.1e-08 9.26e-08 2.72e-07 3.28e-07 2.42e-07 1.91e-07 1.27e-07 7.56e-08 1.82e-08 1.67e-07 9.14e-07 5.91e-08 1.22e-08 1.93e-07 3.5e-08 1.41e-07 3.79e-08 5.4e-08
ENSG00000126088 UROD 113284 4.18e-06 4.65e-06 8.72e-07 2.42e-06 1.53e-06 1.35e-06 3.83e-06 1.04e-06 4.4e-06 2.07e-06 4.46e-06 3.43e-06 7.58e-06 1.96e-06 1.46e-06 3.03e-06 2.06e-06 3.32e-06 1.43e-06 1e-06 2.91e-06 4.5e-06 3.72e-06 1.44e-06 5.26e-06 1.74e-06 2.47e-06 1.79e-06 4.17e-06 4.12e-06 2.13e-06 4.91e-07 5.9e-07 1.52e-06 2.03e-06 9.71e-07 9.56e-07 4.6e-07 9.45e-07 3.71e-07 7.52e-07 5.27e-06 4.34e-07 1.59e-07 5.92e-07 6.03e-07 9.94e-07 4.27e-07 3.43e-07
ENSG00000188396 TCTEX1D4 317559 1.28e-06 9.09e-07 2.95e-07 4.37e-07 2.46e-07 4.35e-07 1.02e-06 3.31e-07 1.11e-06 3.76e-07 1.35e-06 5.57e-07 1.57e-06 2.54e-07 4.53e-07 7e-07 7.73e-07 5.63e-07 4.65e-07 4.95e-07 3.8e-07 9.92e-07 7.95e-07 5.91e-07 1.92e-06 3.63e-07 6.13e-07 5.63e-07 1.01e-06 1.04e-06 5.48e-07 4.87e-08 1.79e-07 5.28e-07 4.22e-07 3.98e-07 4e-07 1.58e-07 1.73e-07 8.93e-08 2.83e-07 1.36e-06 6.64e-08 2.68e-08 1.85e-07 7.5e-08 2.01e-07 8.35e-08 9.23e-08
ENSG00000198520 ARMH1 449521 8.43e-07 4.93e-07 9.89e-08 3.62e-07 9.86e-08 1.97e-07 5.28e-07 1.45e-07 4.26e-07 2.34e-07 6.28e-07 3.61e-07 7.19e-07 1.1e-07 1.78e-07 2.23e-07 2.98e-07 3.95e-07 1.89e-07 1.32e-07 1.97e-07 3.76e-07 3.3e-07 1.61e-07 7.42e-07 2.54e-07 2.58e-07 2.54e-07 3.83e-07 4.9e-07 2.73e-07 7.41e-08 5.6e-08 1.57e-07 3.04e-07 7.57e-08 1.08e-07 8.33e-08 4.55e-08 3.12e-08 8.55e-08 4.82e-07 2.71e-08 1.95e-08 1.25e-07 1.59e-08 1.11e-07 7.14e-09 5.43e-08
ENSG00000222009 BTBD19 315752 1.29e-06 9.28e-07 2.88e-07 4.4e-07 2.48e-07 4.39e-07 1.07e-06 3.26e-07 1.13e-06 3.66e-07 1.35e-06 5.71e-07 1.59e-06 2.57e-07 4.33e-07 6.89e-07 7.7e-07 5.69e-07 4.7e-07 5.33e-07 3.91e-07 1.01e-06 8.03e-07 5.84e-07 1.92e-06 3.59e-07 6.19e-07 5.61e-07 1.02e-06 1.06e-06 5.39e-07 4.91e-08 1.81e-07 5.21e-07 4.25e-07 3.91e-07 4.16e-07 1.5e-07 1.83e-07 8.98e-08 2.84e-07 1.4e-06 7.53e-08 3.36e-08 1.88e-07 7.57e-08 1.93e-07 8.43e-08 9.32e-08