Genes within 1Mb (chr1:45075643:AT:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -415520 eQTL 6.82e-03 -0.0688 0.0254 0.0 0.0 0.0947
ENSG00000126088 UROD 64693 pQTL 7.39e-05 0.0973 0.0245 0.0 0.0 0.0925
ENSG00000126088 UROD 64693 eQTL 8.50e-05 0.139 0.0352 0.0 0.0 0.0947
ENSG00000132781 MUTYH -264827 eQTL 3.53e-03 -0.0654 0.0224 0.0 0.0 0.0947
ENSG00000142945 KIF2C 335825 eQTL 2.87e-02 -0.0625 0.0285 0.0 0.0 0.0947
ENSG00000142959 BEST4 287473 eQTL 2.02e-02 0.11 0.0474 0.0 0.0 0.0947
ENSG00000159588 CCDC17 -548414 eQTL 1.05e-02 0.0619 0.0241 0.0 0.0 0.0947
ENSG00000159596 TMEM69 -612538 eQTL 1.59e-02 0.0902 0.0374 0.0 0.0 0.0947
ENSG00000162415 ZSWIM5 -230566 eQTL 6.76e-04 -0.121 0.0356 0.0 0.0 0.0947
ENSG00000173846 PLK3 275266 eQTL 7.03e-03 0.0523 0.0194 0.0 0.0 0.0947
ENSG00000222009 BTBD19 267161 eQTL 1.70e-09 -0.15 0.0246 0.0 0.0 0.0947
ENSG00000234329 AL604028.2 -576183 eQTL 2.11e-03 -0.13 0.0422 0.0 0.0 0.0947
ENSG00000281912 LINC01144 -228267 eQTL 4.08e-02 -0.117 0.0573 0.0 0.0 0.0947


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -415520 1.29e-06 5.6e-07 7.87e-08 3.48e-07 9.82e-08 4.35e-07 1.1e-06 5.19e-08 4.3e-07 2.06e-07 1.07e-06 2.55e-07 1.54e-06 8.44e-08 5.69e-08 2.08e-07 8.74e-08 4.24e-07 1.13e-07 4.04e-08 1.6e-07 5.18e-07 4e-07 3.59e-08 1.46e-06 2.39e-07 1.33e-07 1.47e-07 4.06e-07 1e-06 1.93e-07 4.03e-08 3.13e-08 1.17e-07 3.52e-07 2.74e-08 5.11e-08 6.78e-08 6.59e-08 6.67e-08 5.13e-08 1.64e-06 3.46e-08 1.14e-07 7.79e-08 9.12e-09 1.19e-07 3.8e-09 4.81e-08
ENSG00000126088 UROD 64693 3.86e-05 1.93e-05 6.57e-06 1.1e-05 3.53e-06 8.94e-06 2.38e-05 1.99e-06 1.54e-05 6.93e-06 2.06e-05 7.07e-06 4.07e-05 5.63e-06 5.35e-06 9.46e-06 8.79e-06 1.29e-05 5.97e-06 3.72e-06 8.72e-06 2.28e-05 1.67e-05 4.81e-06 2.73e-05 5.37e-06 7.69e-06 5.22e-06 2.23e-05 1.35e-05 9.27e-06 1.51e-06 1.21e-06 5.37e-06 7.21e-06 4.07e-06 1.71e-06 2.51e-06 2.35e-06 2.18e-06 1.72e-06 4.16e-05 4.96e-06 5.78e-07 2.08e-06 4.85e-06 3.35e-06 1.66e-06 1.55e-06
ENSG00000159588 CCDC17 -548414 8.63e-07 1.83e-07 5.49e-08 2.27e-07 9.82e-08 2.01e-07 5.65e-07 5.35e-08 1.98e-07 1.03e-07 3.32e-07 1.31e-07 7.53e-07 6.76e-08 6e-08 9.6e-08 4.24e-08 2.56e-07 7.12e-08 3.88e-08 1.25e-07 2.24e-07 2e-07 3.49e-08 5.15e-07 1.51e-07 1.07e-07 9.74e-08 1.48e-07 5.17e-07 1.09e-07 3.82e-08 3.3e-08 9.58e-08 1.27e-07 3.95e-08 4.67e-08 9.23e-08 7.92e-08 3.8e-08 4.36e-08 1.05e-06 5.24e-08 1.26e-08 9.88e-08 1.77e-08 1.26e-07 4.26e-09 4.85e-08
ENSG00000159596 TMEM69 -612538 6.8e-07 1.51e-07 4.47e-08 2.07e-07 9.79e-08 1.5e-07 4.25e-07 5.21e-08 1.66e-07 6.75e-08 2.18e-07 1.11e-07 5.39e-07 6.38e-08 5.55e-08 7.89e-08 4.17e-08 1.8e-07 6.07e-08 3.74e-08 1.21e-07 1.76e-07 1.68e-07 4.16e-08 3.27e-07 1.26e-07 1.06e-07 9.57e-08 1.37e-07 2.89e-07 1.02e-07 3.72e-08 3.09e-08 8.89e-08 5.41e-08 3.77e-08 4.91e-08 9.61e-08 8.19e-08 3.37e-08 3.43e-08 6.81e-07 4.19e-08 1.62e-08 1.01e-07 1.83e-08 1.25e-07 4.41e-09 4.74e-08
ENSG00000222009 BTBD19 267161 2.18e-06 9e-07 3.45e-07 7.39e-07 3.5e-07 7.87e-07 1.31e-06 5.89e-08 1.44e-06 3.82e-07 2e-06 5.7e-07 2.79e-06 1.84e-07 2.96e-07 8.12e-07 7.7e-07 7.89e-07 4.95e-07 7.84e-08 4.44e-07 1.93e-06 9.73e-07 2.24e-07 2.41e-06 4.33e-07 5.05e-07 4.06e-07 1.46e-06 1.61e-06 5.3e-07 5.08e-08 4.55e-08 5.21e-07 5.32e-07 1.71e-07 7.86e-08 1.56e-07 4.9e-08 9.55e-09 8.29e-08 4.74e-06 1.24e-07 1.79e-07 3.3e-08 1.17e-07 9.83e-08 3.35e-09 5.52e-08
ENSG00000234329 AL604028.2 -576183 7.76e-07 1.7e-07 5.14e-08 2.24e-07 9.8e-08 1.71e-07 5.2e-07 5.21e-08 1.86e-07 9.35e-08 2.68e-07 1.2e-07 6.47e-07 6.56e-08 5.84e-08 8.71e-08 4.01e-08 2.21e-07 6.75e-08 3.89e-08 1.26e-07 2.06e-07 1.73e-07 3.68e-08 4.27e-07 1.39e-07 1.07e-07 9.61e-08 1.36e-07 3.93e-07 1.07e-07 3.95e-08 3.28e-08 9.78e-08 7.55e-08 3.93e-08 4.78e-08 9.25e-08 8.3e-08 4.02e-08 3.91e-08 8.03e-07 4.7e-08 5.89e-09 1.01e-07 1.87e-08 1.24e-07 4.33e-09 4.85e-08
ENSG00000281912 LINC01144 -228267 3.58e-06 1.33e-06 2.17e-07 1.28e-06 4.48e-07 7.53e-07 2.03e-06 8.17e-08 1.75e-06 5.63e-07 1.83e-06 6.57e-07 3.43e-06 2.72e-07 4.6e-07 9.54e-07 9.26e-07 1.16e-06 8.61e-07 1.71e-07 7.61e-07 2.31e-06 1.59e-06 4.38e-07 2.56e-06 7.38e-07 7.31e-07 6.51e-07 1.72e-06 1.86e-06 6.78e-07 6.92e-08 9.89e-08 6.64e-07 8.23e-07 3.94e-07 1.05e-07 2.38e-07 7.41e-08 2.93e-07 1.85e-07 5.66e-06 3.78e-07 1.51e-07 8.68e-08 2.29e-07 1.13e-07 5.79e-08 6.32e-08