Genes within 1Mb (chr1:45022954:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117450 PRDX1 -500093 eQTL 8.70e-03 0.0329 0.0125 0.0 0.0 0.314
ENSG00000126088 UROD 12004 pQTL 1.27e-99 0.304 0.0132 0.0 0.0 0.316
ENSG00000126088 UROD 12004 eQTL 1.57e-46 0.307 0.0203 0.0 0.0 0.314
ENSG00000132780 NASP -560892 eQTL 2.51e-02 0.0392 0.0175 0.0 0.0 0.314
ENSG00000132781 MUTYH -317516 eQTL 1.70e-03 -0.0448 0.0142 0.0 0.0 0.314
ENSG00000142945 KIF2C 283136 eQTL 5.68e-08 0.0981 0.0179 0.0 0.0 0.314
ENSG00000142959 BEST4 234784 eQTL 3.97e-02 -0.0623 0.0302 0.0 0.0 0.314
ENSG00000173846 PLK3 222577 eQTL 3.86e-09 0.0723 0.0122 0.0 0.0 0.314
ENSG00000186603 HPDL -303951 eQTL 1.76e-02 -0.07 0.0295 0.00155 0.0 0.314
ENSG00000198520 ARMH1 348241 eQTL 8.32e-04 0.0643 0.0192 0.0 0.0 0.314
ENSG00000222009 BTBD19 214472 eQTL 2.70e-02 -0.0353 0.016 0.0 0.0 0.314


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N -468209 7.3e-07 5.67e-07 1.05e-07 3.99e-07 1.11e-07 1.71e-07 5.2e-07 9.07e-08 3.03e-07 2.01e-07 6.39e-07 2.8e-07 6.77e-07 1.48e-07 1.71e-07 1.39e-07 2.48e-07 3.58e-07 2.25e-07 1.51e-07 1.87e-07 2.86e-07 3.11e-07 1.25e-07 7.72e-07 2e-07 1.74e-07 2.54e-07 2.76e-07 4.1e-07 2.73e-07 4.75e-08 5.47e-08 1.17e-07 3.07e-07 8.17e-08 1.09e-07 6.46e-08 4.17e-08 7.39e-08 4.78e-08 4.55e-07 2.8e-08 1.26e-08 5.49e-08 9.49e-09 9.46e-08 1.15e-08 5.58e-08
ENSG00000117450 PRDX1 -500093 5.85e-07 4.24e-07 8.51e-08 3.62e-07 1.03e-07 1.5e-07 4.42e-07 7.65e-08 2.6e-07 1.6e-07 4.74e-07 2.09e-07 5.54e-07 1.17e-07 1.45e-07 1.14e-07 1.69e-07 3.04e-07 1.81e-07 1.17e-07 1.68e-07 2.45e-07 2.77e-07 1.13e-07 6.18e-07 1.82e-07 1.39e-07 2.01e-07 2.13e-07 2.97e-07 2.11e-07 5.71e-08 4.74e-08 1.21e-07 2.43e-07 6.85e-08 1.1e-07 5.36e-08 6.08e-08 8.3e-08 3.6e-08 3.55e-07 1.65e-08 5.89e-09 4.06e-08 8.42e-09 1.05e-07 3.25e-09 4.59e-08
ENSG00000126088 UROD 12004 2.62e-05 2.99e-05 5.99e-06 1.51e-05 5.32e-06 1.36e-05 4.1e-05 4.49e-06 2.98e-05 1.49e-05 3.69e-05 1.63e-05 4.6e-05 1.24e-05 6.25e-06 1.59e-05 1.53e-05 2.33e-05 7.46e-06 6.66e-06 1.38e-05 2.96e-05 2.89e-05 8.66e-06 4.05e-05 7.34e-06 1.25e-05 1.18e-05 3.04e-05 2.45e-05 1.87e-05 1.58e-06 2.42e-06 6.8e-06 1.12e-05 5.52e-06 2.84e-06 3.16e-06 4.43e-06 3.28e-06 1.74e-06 3.4e-05 2.95e-06 3.84e-07 2.27e-06 3.51e-06 3.96e-06 1.53e-06 1.48e-06
ENSG00000126106 \N 348473 1.25e-06 9.19e-07 2.01e-07 5.65e-07 1.05e-07 3.32e-07 9.43e-07 2.7e-07 8.61e-07 2.85e-07 1.36e-06 5.45e-07 1.46e-06 2.72e-07 4.26e-07 3.35e-07 7.76e-07 5.27e-07 4.7e-07 4.48e-07 2.86e-07 5.86e-07 6.18e-07 4.22e-07 1.86e-06 2.49e-07 4.34e-07 5.31e-07 6.84e-07 9.25e-07 5.1e-07 1.29e-07 1.94e-07 2.17e-07 3.84e-07 3.02e-07 2.98e-07 1.26e-07 1.24e-07 8.36e-09 1.45e-07 1.22e-06 6.87e-08 8.06e-08 1.41e-07 3.87e-08 1.45e-07 8.16e-08 6.04e-08
ENSG00000132781 MUTYH -317516 1.3e-06 9.33e-07 3.03e-07 9.69e-07 1.11e-07 4.43e-07 1.22e-06 3.49e-07 1.13e-06 3.8e-07 1.48e-06 5.57e-07 1.83e-06 2.79e-07 4.4e-07 4.53e-07 7.88e-07 5.8e-07 6.68e-07 6.68e-07 3.91e-07 9.64e-07 7.79e-07 5.4e-07 2.05e-06 2.48e-07 5.24e-07 6.89e-07 8.97e-07 1.09e-06 5.45e-07 1.86e-07 2.19e-07 3.49e-07 4.63e-07 3.71e-07 4.16e-07 1.37e-07 1.71e-07 9.61e-09 2.39e-07 1.57e-06 5.29e-08 1.3e-07 1.94e-07 4.57e-08 1.8e-07 8.58e-08 5.55e-08
ENSG00000142945 KIF2C 283136 1.32e-06 1.18e-06 3.35e-07 1.21e-06 1.96e-07 5.09e-07 1.6e-06 3.66e-07 1.44e-06 4.19e-07 1.85e-06 6.57e-07 2.25e-06 2.77e-07 5.23e-07 6.7e-07 8.95e-07 6.8e-07 8.67e-07 6.52e-07 6.12e-07 1.3e-06 8.68e-07 6.47e-07 2.25e-06 3.17e-07 6.53e-07 7.09e-07 1.24e-06 1.29e-06 7.05e-07 2.53e-07 2.5e-07 5.42e-07 5.23e-07 4.75e-07 5.12e-07 1.25e-07 3.43e-07 8.98e-08 3e-07 1.65e-06 5.07e-08 1.49e-07 1.89e-07 7.77e-08 2.08e-07 8.18e-08 8.09e-08
ENSG00000142959 BEST4 234784 1.4e-06 2.2e-06 2.74e-07 1.37e-06 3.46e-07 6.52e-07 1.27e-06 4.34e-07 1.7e-06 6.65e-07 1.89e-06 1.14e-06 2.69e-06 6.67e-07 4.85e-07 9.07e-07 1.07e-06 1.08e-06 5.59e-07 5.06e-07 7.67e-07 1.91e-06 1.25e-06 5.67e-07 2.65e-06 6.17e-07 9.55e-07 8.75e-07 1.53e-06 1.3e-06 7.52e-07 2.55e-07 3.45e-07 6.21e-07 8.33e-07 4.75e-07 6.97e-07 2.47e-07 4.63e-07 2.88e-07 3.04e-07 2.17e-06 2.33e-07 1.99e-07 1.74e-07 1.2e-07 2.19e-07 5.98e-08 1.23e-07
ENSG00000159588 \N -601103 3.53e-07 2.17e-07 6.86e-08 2.48e-07 9.94e-08 8.4e-08 2.86e-07 5.78e-08 1.85e-07 1.05e-07 2.18e-07 1.31e-07 3.04e-07 8.55e-08 6.93e-08 8.08e-08 6.17e-08 2.21e-07 9.19e-08 8.52e-08 1.33e-07 1.76e-07 1.81e-07 3.67e-08 2.99e-07 1.31e-07 1.19e-07 1.46e-07 1.34e-07 1.46e-07 1.39e-07 8.32e-08 4.96e-08 9.5e-08 6.78e-08 4.6e-08 6.2e-08 7.61e-08 5.78e-08 6.19e-08 5.04e-08 1.79e-07 3.53e-08 1.92e-08 3.07e-08 8.31e-09 7.13e-08 0.0 4.83e-08
ENSG00000173846 PLK3 222577 1.54e-06 2.43e-06 2.9e-07 1.56e-06 3.45e-07 6.94e-07 1.32e-06 3.83e-07 1.78e-06 7.2e-07 2.02e-06 1.32e-06 2.9e-06 8.74e-07 3.88e-07 9.45e-07 1.1e-06 1.16e-06 5.52e-07 6.08e-07 7e-07 1.98e-06 1.54e-06 6.43e-07 2.68e-06 7.37e-07 1.02e-06 1.07e-06 1.69e-06 1.39e-06 7.49e-07 2.46e-07 3.61e-07 5.73e-07 9.25e-07 5.39e-07 7.36e-07 2.97e-07 4.85e-07 3.34e-07 2.83e-07 2.51e-06 3.34e-07 1.9e-07 1.69e-07 1.72e-07 2.3e-07 1.15e-07 1.58e-07
ENSG00000196517 \N 991487 2.67e-07 1.19e-07 3.71e-08 1.82e-07 8.83e-08 9.61e-08 1.44e-07 5.33e-08 1.4e-07 4.57e-08 1.6e-07 7.78e-08 1.41e-07 6.76e-08 5.99e-08 7.26e-08 3.94e-08 1.21e-07 5.75e-08 4.04e-08 1.08e-07 1.26e-07 1.34e-07 3.68e-08 1.37e-07 1.19e-07 1.12e-07 9.57e-08 1.05e-07 1.1e-07 9.64e-08 3.03e-08 3.61e-08 8.49e-08 8.94e-08 3.95e-08 4.99e-08 9.65e-08 6.78e-08 3.55e-08 3.59e-08 1.35e-07 4.7e-08 1.17e-08 6.38e-08 1.66e-08 1.19e-07 3.8e-09 4.81e-08
ENSG00000281912 \N -280956 1.32e-06 1.13e-06 3.48e-07 1.26e-06 2.05e-07 5.26e-07 1.58e-06 3.52e-07 1.49e-06 4.32e-07 1.85e-06 6.55e-07 2.31e-06 2.59e-07 5.31e-07 7e-07 8.94e-07 6.91e-07 8.59e-07 6.33e-07 6.17e-07 1.28e-06 8.59e-07 6.54e-07 2.22e-06 3.28e-07 6.81e-07 7.19e-07 1.24e-06 1.32e-06 7.26e-07 2.42e-07 2.53e-07 5.46e-07 5.28e-07 4.67e-07 5.17e-07 1.36e-07 3.25e-07 9.07e-08 2.89e-07 1.64e-06 6.17e-08 1.65e-07 1.85e-07 7.91e-08 2.1e-07 8.31e-08 8.83e-08