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Genes within 1Mb (chr1:44990297:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -500866 sc-eQTL 3.60e-01 -0.188 0.205 0.051 B_Activated L2
ENSG00000070785 EIF2B3 3575 sc-eQTL 8.87e-01 -0.0284 0.2 0.051 B_Activated L2
ENSG00000086015 MAST2 -796690 sc-eQTL 8.99e-01 0.0225 0.178 0.051 B_Activated L2
ENSG00000117419 ERI3 635037 sc-eQTL 8.44e-01 0.0427 0.216 0.051 B_Activated L2
ENSG00000117425 PTCH2 147044 sc-eQTL 1.78e-01 0.163 0.12 0.051 B_Activated L2
ENSG00000117448 AKR1A1 -560246 sc-eQTL 3.20e-01 -0.201 0.201 0.051 B_Activated L2
ENSG00000117450 PRDX1 -532750 sc-eQTL 8.25e-01 0.035 0.158 0.051 B_Activated L2
ENSG00000126088 UROD -20653 sc-eQTL 1.57e-02 0.501 0.205 0.051 B_Activated L2
ENSG00000126106 TMEM53 315816 sc-eQTL 1.64e-01 -0.245 0.176 0.051 B_Activated L2
ENSG00000126107 HECTD3 -21027 sc-eQTL 9.96e-01 -0.000955 0.203 0.051 B_Activated L2
ENSG00000132773 TOE1 -349755 sc-eQTL 7.44e-01 0.0652 0.199 0.051 B_Activated L2
ENSG00000132780 NASP -593549 sc-eQTL 8.11e-01 -0.047 0.196 0.051 B_Activated L2
ENSG00000132781 MUTYH -350596 sc-eQTL 1.74e-01 -0.282 0.207 0.051 B_Activated L2
ENSG00000142937 RPS8 215046 sc-eQTL 2.49e-01 -0.12 0.104 0.051 B_Activated L2
ENSG00000159214 CCDC24 998938 sc-eQTL 7.86e-01 -0.0476 0.175 0.051 B_Activated L2
ENSG00000159592 GPBP1L1 -697816 sc-eQTL 3.19e-01 -0.21 0.21 0.051 B_Activated L2
ENSG00000159596 TMEM69 -697884 sc-eQTL 5.43e-01 -0.117 0.192 0.051 B_Activated L2
ENSG00000173846 PLK3 189920 sc-eQTL 4.29e-01 0.15 0.189 0.051 B_Activated L2
ENSG00000178028 DMAP1 776842 sc-eQTL 8.51e-01 0.0403 0.214 0.051 B_Activated L2
ENSG00000187147 RNF220 585103 sc-eQTL 7.16e-01 0.0707 0.194 0.051 B_Activated L2
ENSG00000197429 IPP -760356 sc-eQTL 7.60e-01 0.0586 0.191 0.051 B_Activated L2
ENSG00000198520 ARMH1 315605 sc-eQTL 8.75e-01 0.03 0.19 0.051 B_Activated L2
ENSG00000280670 CCDC163 -509782 sc-eQTL 1.25e-01 -0.213 0.138 0.051 B_Activated L2
ENSG00000070759 TESK2 -500866 sc-eQTL 7.09e-01 0.0738 0.197 0.05 CD4_CTL L2
ENSG00000070785 EIF2B3 3575 sc-eQTL 9.57e-01 -0.0117 0.218 0.05 CD4_CTL L2
ENSG00000086015 MAST2 -796690 sc-eQTL 1.67e-01 0.266 0.192 0.05 CD4_CTL L2
ENSG00000117419 ERI3 635037 sc-eQTL 1.01e-01 0.357 0.217 0.05 CD4_CTL L2
ENSG00000117448 AKR1A1 -560246 sc-eQTL 1.15e-01 -0.352 0.222 0.05 CD4_CTL L2
ENSG00000117450 PRDX1 -532750 sc-eQTL 9.10e-01 -0.0185 0.164 0.05 CD4_CTL L2
ENSG00000126088 UROD -20653 sc-eQTL 3.72e-01 -0.194 0.216 0.05 CD4_CTL L2
ENSG00000126107 HECTD3 -21027 sc-eQTL 6.39e-01 -0.0981 0.209 0.05 CD4_CTL L2
ENSG00000132773 TOE1 -349755 sc-eQTL 5.91e-01 0.112 0.208 0.05 CD4_CTL L2
ENSG00000132780 NASP -593549 sc-eQTL 7.99e-01 0.0499 0.196 0.05 CD4_CTL L2
ENSG00000132781 MUTYH -350596 sc-eQTL 2.98e-01 -0.221 0.212 0.05 CD4_CTL L2
ENSG00000142937 RPS8 215046 sc-eQTL 4.15e-01 0.0724 0.0887 0.05 CD4_CTL L2
ENSG00000159592 GPBP1L1 -697816 sc-eQTL 5.41e-01 0.126 0.206 0.05 CD4_CTL L2
ENSG00000159596 TMEM69 -697884 sc-eQTL 7.28e-01 0.071 0.204 0.05 CD4_CTL L2
ENSG00000162415 ZSWIM5 -315912 sc-eQTL 6.83e-01 0.0768 0.188 0.05 CD4_CTL L2
ENSG00000173846 PLK3 189920 sc-eQTL 4.19e-01 0.127 0.157 0.05 CD4_CTL L2
ENSG00000178028 DMAP1 776842 sc-eQTL 5.14e-01 -0.145 0.222 0.05 CD4_CTL L2
ENSG00000187147 RNF220 585103 sc-eQTL 7.35e-01 0.0598 0.176 0.05 CD4_CTL L2
ENSG00000197429 IPP -760356 sc-eQTL 6.16e-01 0.109 0.217 0.05 CD4_CTL L2
ENSG00000198520 ARMH1 315605 sc-eQTL 4.03e-01 0.135 0.161 0.05 CD4_CTL L2
ENSG00000070759 TESK2 -500866 sc-eQTL 4.00e-01 -0.165 0.196 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 3575 sc-eQTL 7.59e-02 -0.371 0.208 0.051 NK_CD56bright L2
ENSG00000086015 MAST2 -796690 sc-eQTL 6.20e-02 0.367 0.196 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 635037 sc-eQTL 7.15e-01 0.0772 0.211 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -560246 sc-eQTL 4.23e-01 0.153 0.191 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -532750 sc-eQTL 8.48e-01 -0.0349 0.182 0.051 NK_CD56bright L2
ENSG00000126088 UROD -20653 sc-eQTL 8.57e-01 -0.0324 0.18 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 315816 sc-eQTL 8.75e-01 0.0316 0.201 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 -21027 sc-eQTL 3.61e-01 0.187 0.204 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -349755 sc-eQTL 3.79e-01 0.166 0.188 0.051 NK_CD56bright L2
ENSG00000132780 NASP -593549 sc-eQTL 8.92e-01 -0.0245 0.18 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -350596 sc-eQTL 8.16e-01 0.0517 0.221 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 215046 sc-eQTL 8.92e-01 -0.0133 0.0979 0.051 NK_CD56bright L2
ENSG00000159214 CCDC24 998938 sc-eQTL 6.08e-02 -0.376 0.2 0.051 NK_CD56bright L2
ENSG00000159592 GPBP1L1 -697816 sc-eQTL 1.59e-01 0.291 0.206 0.051 NK_CD56bright L2
ENSG00000159596 TMEM69 -697884 sc-eQTL 9.30e-01 0.0172 0.195 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -315912 sc-eQTL 8.19e-01 -0.0411 0.179 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 189920 sc-eQTL 2.07e-01 -0.232 0.183 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 776842 sc-eQTL 9.86e-01 0.00387 0.219 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 585103 sc-eQTL 6.98e-01 -0.0705 0.181 0.051 NK_CD56bright L2
ENSG00000197429 IPP -760356 sc-eQTL 9.66e-01 0.0088 0.208 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -500866 sc-eQTL 4.12e-01 0.17 0.207 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 3575 sc-eQTL 2.38e-01 -0.251 0.212 0.053 NK_HLA L2
ENSG00000086015 MAST2 -796690 sc-eQTL 3.32e-01 0.206 0.212 0.053 NK_HLA L2
ENSG00000117419 ERI3 635037 sc-eQTL 8.97e-01 -0.028 0.215 0.053 NK_HLA L2
ENSG00000117448 AKR1A1 -560246 sc-eQTL 3.40e-01 -0.204 0.214 0.053 NK_HLA L2
ENSG00000117450 PRDX1 -532750 sc-eQTL 5.82e-01 -0.101 0.183 0.053 NK_HLA L2
ENSG00000126088 UROD -20653 sc-eQTL 1.76e-01 0.291 0.214 0.053 NK_HLA L2
ENSG00000126106 TMEM53 315816 sc-eQTL 1.82e-01 0.272 0.203 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -21027 sc-eQTL 9.26e-01 -0.0212 0.228 0.053 NK_HLA L2
ENSG00000132773 TOE1 -349755 sc-eQTL 5.25e-01 0.134 0.21 0.053 NK_HLA L2
ENSG00000132780 NASP -593549 sc-eQTL 7.37e-01 -0.0712 0.211 0.053 NK_HLA L2
ENSG00000132781 MUTYH -350596 sc-eQTL 9.51e-01 -0.0134 0.22 0.053 NK_HLA L2
ENSG00000142937 RPS8 215046 sc-eQTL 8.21e-01 0.0211 0.093 0.053 NK_HLA L2
ENSG00000159214 CCDC24 998938 sc-eQTL 1.32e-01 -0.297 0.196 0.053 NK_HLA L2
ENSG00000159592 GPBP1L1 -697816 sc-eQTL 9.32e-01 0.0163 0.191 0.053 NK_HLA L2
ENSG00000159596 TMEM69 -697884 sc-eQTL 8.39e-01 -0.0424 0.208 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -315912 sc-eQTL 1.45e-01 -0.276 0.189 0.053 NK_HLA L2
ENSG00000173846 PLK3 189920 sc-eQTL 2.79e-01 0.208 0.192 0.053 NK_HLA L2
ENSG00000178028 DMAP1 776842 sc-eQTL 4.22e-01 -0.174 0.216 0.053 NK_HLA L2
ENSG00000187147 RNF220 585103 sc-eQTL 1.30e-01 0.281 0.185 0.053 NK_HLA L2
ENSG00000197429 IPP -760356 sc-eQTL 3.77e-01 -0.184 0.208 0.053 NK_HLA L2
ENSG00000070759 TESK2 -500866 sc-eQTL 8.40e-01 -0.0468 0.232 0.052 PB L2
ENSG00000070785 EIF2B3 3575 sc-eQTL 6.41e-01 0.0924 0.197 0.052 PB L2
ENSG00000086015 MAST2 -796690 sc-eQTL 9.68e-01 0.01 0.248 0.052 PB L2
ENSG00000117419 ERI3 635037 sc-eQTL 6.89e-01 0.0963 0.24 0.052 PB L2
ENSG00000117425 PTCH2 147044 sc-eQTL 7.74e-02 0.399 0.224 0.052 PB L2
ENSG00000117448 AKR1A1 -560246 sc-eQTL 4.04e-01 -0.107 0.128 0.052 PB L2
ENSG00000117450 PRDX1 -532750 sc-eQTL 7.66e-01 -0.0345 0.116 0.052 PB L2
ENSG00000126088 UROD -20653 sc-eQTL 6.25e-01 -0.0848 0.173 0.052 PB L2
ENSG00000126106 TMEM53 315816 sc-eQTL 8.09e-01 0.0559 0.231 0.052 PB L2
ENSG00000126107 HECTD3 -21027 sc-eQTL 3.75e-01 -0.169 0.19 0.052 PB L2
ENSG00000132773 TOE1 -349755 sc-eQTL 7.77e-01 0.0699 0.246 0.052 PB L2
ENSG00000132780 NASP -593549 sc-eQTL 7.14e-01 0.0942 0.257 0.052 PB L2
ENSG00000132781 MUTYH -350596 sc-eQTL 3.78e-01 -0.237 0.268 0.052 PB L2
ENSG00000142937 RPS8 215046 sc-eQTL 5.42e-01 -0.0785 0.128 0.052 PB L2
ENSG00000159214 CCDC24 998938 sc-eQTL 2.42e-01 0.286 0.243 0.052 PB L2
ENSG00000159592 GPBP1L1 -697816 sc-eQTL 9.35e-01 0.0219 0.266 0.052 PB L2
ENSG00000159596 TMEM69 -697884 sc-eQTL 8.56e-01 0.0404 0.222 0.052 PB L2
ENSG00000173846 PLK3 189920 sc-eQTL 7.40e-01 -0.0789 0.237 0.052 PB L2
ENSG00000178028 DMAP1 776842 sc-eQTL 2.00e-01 0.351 0.272 0.052 PB L2
ENSG00000187147 RNF220 585103 sc-eQTL 6.74e-01 0.096 0.228 0.052 PB L2
ENSG00000197429 IPP -760356 sc-eQTL 7.49e-01 -0.0808 0.252 0.052 PB L2
ENSG00000198520 ARMH1 315605 sc-eQTL 5.01e-01 0.14 0.207 0.052 PB L2
ENSG00000280670 CCDC163 -509782 sc-eQTL 3.03e-01 -0.204 0.198 0.052 PB L2
ENSG00000070759 TESK2 -500866 sc-eQTL 2.05e-01 0.244 0.192 0.05 Pro_T L2
ENSG00000070785 EIF2B3 3575 sc-eQTL 9.28e-01 0.0156 0.171 0.05 Pro_T L2
ENSG00000086015 MAST2 -796690 sc-eQTL 3.82e-01 0.16 0.183 0.05 Pro_T L2
ENSG00000117419 ERI3 635037 sc-eQTL 3.87e-01 -0.159 0.184 0.05 Pro_T L2
ENSG00000117448 AKR1A1 -560246 sc-eQTL 4.01e-01 0.109 0.129 0.05 Pro_T L2
ENSG00000117450 PRDX1 -532750 sc-eQTL 3.22e-01 0.111 0.112 0.05 Pro_T L2
ENSG00000126088 UROD -20653 sc-eQTL 7.99e-01 0.0408 0.16 0.05 Pro_T L2
ENSG00000126106 TMEM53 315816 sc-eQTL 5.09e-02 0.353 0.18 0.05 Pro_T L2
ENSG00000126107 HECTD3 -21027 sc-eQTL 3.55e-01 0.171 0.185 0.05 Pro_T L2
ENSG00000132773 TOE1 -349755 sc-eQTL 8.50e-01 0.0368 0.194 0.05 Pro_T L2
ENSG00000132780 NASP -593549 sc-eQTL 4.20e-01 -0.0793 0.0982 0.05 Pro_T L2
ENSG00000132781 MUTYH -350596 sc-eQTL 8.27e-01 -0.0428 0.196 0.05 Pro_T L2
ENSG00000142937 RPS8 215046 sc-eQTL 6.32e-01 -0.0375 0.078 0.05 Pro_T L2
ENSG00000142945 KIF2C 250479 sc-eQTL 9.71e-01 0.00442 0.123 0.05 Pro_T L2
ENSG00000159592 GPBP1L1 -697816 sc-eQTL 3.91e-01 0.167 0.194 0.05 Pro_T L2
ENSG00000159596 TMEM69 -697884 sc-eQTL 7.05e-01 -0.0665 0.175 0.05 Pro_T L2
ENSG00000162415 ZSWIM5 -315912 sc-eQTL 6.30e-01 -0.0741 0.154 0.05 Pro_T L2
ENSG00000173846 PLK3 189920 sc-eQTL 5.91e-01 -0.0891 0.166 0.05 Pro_T L2
ENSG00000178028 DMAP1 776842 sc-eQTL 3.51e-01 -0.188 0.201 0.05 Pro_T L2
ENSG00000186603 HPDL -336598 sc-eQTL 6.21e-01 -0.0559 0.113 0.05 Pro_T L2
ENSG00000187147 RNF220 585103 sc-eQTL 1.35e-01 -0.224 0.149 0.05 Pro_T L2
ENSG00000197429 IPP -760356 sc-eQTL 5.18e-01 0.131 0.201 0.05 Pro_T L2
ENSG00000198520 ARMH1 315605 sc-eQTL 3.07e-01 0.131 0.128 0.05 Pro_T L2
ENSG00000280670 CCDC163 -509782 sc-eQTL 3.97e-01 -0.128 0.151 0.05 Pro_T L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000126088 UROD -20653 pQTL 0.00172 0.105 0.0334 0.0 0.0 0.0477
ENSG00000126088 UROD -20653 eQTL 0.0119 0.12 0.0477 0.0 0.0 0.0471
ENSG00000132773 TOE1 -349755 eQTL 0.0228 -0.0693 0.0304 0.0 0.0 0.0471
ENSG00000142959 BEST4 202127 eQTL 0.0244 -0.144 0.064 0.0 0.0 0.0471
ENSG00000159596 TMEM69 -697884 eQTL 2.99e-13 0.364 0.0491 0.0 0.0 0.0471
ENSG00000162415 ZSWIM5 -315912 eQTL 0.0194 0.113 0.0481 0.00118 0.0 0.0471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126088 UROD -20653 1.83e-05 2.2e-05 4.95e-06 1.31e-05 4.7e-06 1.15e-05 3.18e-05 3.78e-06 2.15e-05 1.17e-05 2.86e-05 1.14e-05 3.83e-05 1e-05 5.84e-06 1.34e-05 1.22e-05 1.93e-05 7.41e-06 6.34e-06 1.19e-05 2.33e-05 2.29e-05 8.47e-06 3.56e-05 6.55e-06 1.02e-05 9.67e-06 2.57e-05 2.5e-05 1.39e-05 1.62e-06 2.6e-06 7.05e-06 9.6e-06 5.51e-06 3.26e-06 3.17e-06 4.8e-06 3.36e-06 1.78e-06 2.7e-05 2.68e-06 4.31e-07 2.43e-06 3.51e-06 3.79e-06 1.6e-06 1.52e-06
ENSG00000159596 TMEM69 -697884 3.1e-07 1.7e-07 6.57e-08 2.27e-07 1.02e-07 8.4e-08 2.4e-07 6.2e-08 1.85e-07 1.05e-07 1.86e-07 1.48e-07 2.38e-07 8.44e-08 6.6e-08 9.48e-08 5.27e-08 2.04e-07 7.11e-08 6.29e-08 1.23e-07 1.7e-07 1.69e-07 4.37e-08 2.36e-07 1.51e-07 1.31e-07 1.36e-07 1.39e-07 1.38e-07 1.22e-07 4.43e-08 4.16e-08 9.52e-08 5.41e-08 3.18e-08 4.62e-08 7.92e-08 5.78e-08 7.65e-08 5.04e-08 1.6e-07 3.35e-08 7.18e-09 4e-08 6.83e-09 7.13e-08 2.2e-09 4.68e-08
ENSG00000225721 \N 214487 1.97e-06 2.45e-06 2.51e-07 1.58e-06 4.53e-07 7.82e-07 1.33e-06 6.28e-07 1.74e-06 8.05e-07 1.93e-06 1.39e-06 3.31e-06 1.1e-06 6.94e-07 1.18e-06 1.02e-06 1.59e-06 7.88e-07 1.15e-06 9.23e-07 2.24e-06 1.87e-06 9.59e-07 3.07e-06 1.21e-06 1.17e-06 1.38e-06 1.85e-06 1.66e-06 1.16e-06 2.21e-07 6.41e-07 1.14e-06 9.16e-07 7.36e-07 7.42e-07 4.24e-07 9.94e-07 3.33e-07 1.51e-07 2.89e-06 3.86e-07 1.89e-07 3.61e-07 3.08e-07 6.26e-07 2.23e-07 2.12e-07