Genes within 1Mb (chr1:44930704:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -856283 eQTL 4.57e-02 0.0468 0.0234 0.0 0.0 0.218
ENSG00000117419 ERI3 575444 eQTL 3.24e-02 -0.031 0.0145 0.0 0.0 0.218
ENSG00000117425 PTCH2 87451 eQTL 2.21e-03 0.086 0.028 0.00281 0.00186 0.218
ENSG00000126106 TMEM53 256223 eQTL 1.50e-01 -0.0442 0.0307 0.00123 0.0 0.218
ENSG00000132763 MMACHC -569596 eQTL 2.49e-02 0.0815 0.0363 0.0 0.0 0.218
ENSG00000132781 MUTYH -409766 eQTL 3.38e-03 -0.0458 0.0156 0.0 0.0 0.218
ENSG00000142959 BEST4 142534 eQTL 2.87e-03 0.0988 0.033 0.0 0.0 0.218
ENSG00000162415 ZSWIM5 -375505 eQTL 5.40e-04 -0.0862 0.0248 0.0 0.0 0.218
ENSG00000173846 PLK3 130327 eQTL 9.99e-03 0.0349 0.0135 0.0 0.0 0.218
ENSG00000188396 TCTEX1D4 124029 eQTL 3.02e-03 -0.0471 0.0158 0.0 0.0 0.218
ENSG00000198520 ARMH1 255991 eQTL 3.80e-02 -0.0438 0.0211 0.00195 0.0 0.218
ENSG00000222009 BTBD19 122222 eQTL 5.69e-32 -0.199 0.0163 0.0 0.0 0.218
ENSG00000280670 CCDC163 -569375 eQTL 3.43e-16 0.355 0.0427 0.0 0.0 0.218


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117425 PTCH2 87451 9.29e-06 1.04e-05 1.23e-06 6.18e-06 2.26e-06 4.22e-06 1.09e-05 1.86e-06 9.27e-06 5.08e-06 1.19e-05 5.33e-06 1.45e-05 3.66e-06 2.42e-06 6.43e-06 4.73e-06 6.22e-06 2.55e-06 2.78e-06 5.06e-06 9.86e-06 7.15e-06 3.08e-06 1.66e-05 2.92e-06 4.67e-06 4.45e-06 1.02e-05 7.83e-06 5.48e-06 1.03e-06 1.12e-06 2.92e-06 4.73e-06 2.07e-06 1.57e-06 1.85e-06 1.59e-06 1.01e-06 1.04e-06 1.25e-05 1.4e-06 1.59e-07 6.87e-07 1.73e-06 1.7e-06 7.34e-07 5.26e-07
ENSG00000187147 \N 525510 1.01e-06 6.04e-07 1.23e-07 4.36e-07 1.06e-07 3.24e-07 6.08e-07 1.21e-07 4.61e-07 2.62e-07 7.44e-07 4.21e-07 9.79e-07 1.54e-07 2.77e-07 2.84e-07 3.24e-07 3.95e-07 2.57e-07 1.87e-07 2.3e-07 5.18e-07 3.77e-07 1.78e-07 1.28e-06 2.46e-07 4e-07 2.74e-07 3.86e-07 5.56e-07 3.49e-07 5.4e-08 4.98e-08 1.56e-07 3.26e-07 6.94e-08 8.52e-08 1.21e-07 6.81e-08 2.53e-08 1.85e-07 5.44e-07 6.3e-08 1.21e-08 1.1e-07 4.38e-08 1.49e-07 1.15e-08 5.71e-08
ENSG00000188396 TCTEX1D4 124029 6.16e-06 8.28e-06 6.5e-07 3.92e-06 1.6e-06 2.59e-06 8.96e-06 1.22e-06 4.88e-06 3.25e-06 8.18e-06 3.25e-06 1.07e-05 3.66e-06 1.03e-06 5.06e-06 3.66e-06 3.93e-06 1.65e-06 1.6e-06 2.93e-06 7.57e-06 4.8e-06 1.88e-06 1.15e-05 2.07e-06 3.56e-06 2.41e-06 6.45e-06 5.83e-06 3.57e-06 6.3e-07 7.66e-07 2.38e-06 2.88e-06 1.17e-06 1.06e-06 5.41e-07 9.69e-07 6.54e-07 7.41e-07 8.1e-06 1.02e-06 1.59e-07 5.79e-07 9.43e-07 9.16e-07 6.9e-07 4.38e-07
ENSG00000222009 BTBD19 122222 6.46e-06 8.81e-06 7.05e-07 4e-06 1.52e-06 2.66e-06 9.22e-06 1.19e-06 5.07e-06 3.34e-06 8.3e-06 3.52e-06 1.1e-05 3.89e-06 1.01e-06 5.1e-06 3.77e-06 3.71e-06 1.65e-06 1.71e-06 3.19e-06 7.67e-06 4.86e-06 1.92e-06 1.16e-05 2.21e-06 3.57e-06 2.43e-06 6.75e-06 6.17e-06 3.67e-06 7.35e-07 7.6e-07 2.44e-06 2.96e-06 1.13e-06 1.08e-06 5.24e-07 9.81e-07 7.13e-07 7.51e-07 8.28e-06 1.13e-06 1.58e-07 5.95e-07 9.38e-07 8.95e-07 7.5e-07 4.68e-07
ENSG00000280670 CCDC163 -569375 8.35e-07 4.93e-07 1.04e-07 3.99e-07 1.05e-07 2.42e-07 5.31e-07 9.26e-08 3.51e-07 2.16e-07 4.97e-07 3.48e-07 7.93e-07 1.23e-07 1.78e-07 2.18e-07 1.85e-07 3.44e-07 2.12e-07 1.65e-07 1.91e-07 4.11e-07 3.07e-07 1.27e-07 9.15e-07 2.13e-07 2.72e-07 2.57e-07 2.78e-07 3.8e-07 2.6e-07 6.63e-08 5.39e-08 1.39e-07 3.47e-07 5.41e-08 1.1e-07 1.06e-07 4.23e-08 5.96e-08 1.38e-07 3.85e-07 4.71e-08 1.11e-08 8.59e-08 2.64e-08 1.27e-07 3.09e-09 4.74e-08