Genes within 1Mb (chr1:44910560:C:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117408 IPO13 963610 eQTL 1.11e-02 0.0416 0.0163 0.00242 0.0 0.395
ENSG00000117450 PRDX1 -612487 eQTL 2.07e-02 -0.028 0.0121 0.0 0.0 0.395
ENSG00000126088 UROD -100390 pQTL 7.55e-57 -0.229 0.0137 0.0 0.0 0.397
ENSG00000126088 UROD -100390 eQTL 1.53e-25 -0.221 0.0206 0.0 0.0 0.395
ENSG00000126106 TMEM53 236079 eQTL 3.74e-01 -0.0241 0.027 0.00148 0.0 0.395
ENSG00000142945 KIF2C 170742 eQTL 4.69e-10 -0.108 0.0172 0.0 0.0 0.395
ENSG00000142959 BEST4 122390 eQTL 6.88e-05 0.116 0.029 0.0105 0.00849 0.395
ENSG00000159596 TMEM69 -777621 eQTL 1.43e-02 0.0563 0.023 0.0 0.0 0.395
ENSG00000173846 PLK3 110183 eQTL 6.91e-04 -0.0404 0.0119 0.0 0.0 0.395
ENSG00000188396 TCTEX1D4 103885 eQTL 2.42e-02 0.0315 0.014 0.0 0.0 0.395
ENSG00000198520 ARMH1 235847 eQTL 4.20e-04 -0.0654 0.0185 0.0 0.0 0.395
ENSG00000222009 BTBD19 102078 eQTL 2.02e-01 0.0197 0.0154 0.00147 0.0 0.395
ENSG00000234329 AL604028.2 -741266 eQTL 1.23e-02 -0.0651 0.0259 0.0 0.0 0.395


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117410 \N 936073 2.74e-07 1.27e-07 3.72e-08 1.83e-07 8.83e-08 9.61e-08 1.53e-07 5.2e-08 1.45e-07 4.57e-08 1.55e-07 8.14e-08 1.47e-07 6.76e-08 6.04e-08 7.17e-08 4.17e-08 1.26e-07 5.36e-08 4.21e-08 1.04e-07 1.28e-07 1.44e-07 3.68e-08 1.46e-07 1.19e-07 1.11e-07 9.57e-08 1.08e-07 1.07e-07 9.92e-08 3.87e-08 3.3e-08 8.68e-08 7.66e-08 3.65e-08 5.11e-08 9.49e-08 7.2e-08 3.55e-08 4.36e-08 1.46e-07 4.19e-08 1.88e-08 6.92e-08 1.83e-08 1.26e-07 4.09e-09 4.73e-08
ENSG00000117450 PRDX1 -612487 3.77e-07 2.89e-07 6.55e-08 2.58e-07 9.82e-08 8.89e-08 3.25e-07 5.84e-08 2.01e-07 1.05e-07 2.98e-07 1.37e-07 3.77e-07 8.26e-08 9.2e-08 9.11e-08 8.64e-08 2.43e-07 7.42e-08 5.87e-08 1.24e-07 2.06e-07 2.04e-07 4.37e-08 2.99e-07 1.23e-07 1.23e-07 1.47e-07 1.4e-07 1.81e-07 1.76e-07 4.85e-08 4.23e-08 9.5e-08 7.55e-08 4.95e-08 5.96e-08 8.76e-08 6.45e-08 6.19e-08 5.34e-08 2.71e-07 4.76e-08 1.19e-08 2.64e-08 6.83e-09 1.21e-07 1.92e-09 4.83e-08
ENSG00000126088 UROD -100390 5.14e-06 7.18e-06 6.07e-07 3.51e-06 1.62e-06 1.6e-06 7.68e-06 1.1e-06 4.5e-06 2.81e-06 7.56e-06 3.37e-06 1e-05 1.98e-06 1.06e-06 3.89e-06 1.98e-06 3.98e-06 1.44e-06 1.16e-06 3.09e-06 5.5e-06 4.72e-06 1.55e-06 8.59e-06 1.74e-06 2.31e-06 1.84e-06 5.66e-06 6.39e-06 2.93e-06 5.4e-07 5.21e-07 1.46e-06 1.89e-06 1.11e-06 9.66e-07 5.11e-07 8.1e-07 4.56e-07 2.8e-07 7.45e-06 4.34e-07 1.68e-07 4.2e-07 9.16e-07 6.79e-07 4.42e-07 4.23e-07
ENSG00000142945 KIF2C 170742 3.2e-06 4.12e-06 4.23e-07 1.99e-06 4.94e-07 8.43e-07 2.49e-06 7.58e-07 2.44e-06 1.23e-06 3.27e-06 1.48e-06 5e-06 1.28e-06 9.04e-07 1.65e-06 1.58e-06 2.21e-06 1.46e-06 1.3e-06 1.16e-06 3.36e-06 2.58e-06 1.17e-06 4.06e-06 1.22e-06 1.38e-06 1.76e-06 2.83e-06 2.95e-06 1.97e-06 3.05e-07 5.66e-07 1.23e-06 1.67e-06 9.75e-07 8.33e-07 3.36e-07 1.14e-06 3.54e-07 3.53e-07 4.14e-06 4.11e-07 1.65e-07 3.57e-07 3.24e-07 3.34e-07 2.19e-07 1.89e-07
ENSG00000142959 BEST4 122390 4.54e-06 5.11e-06 8.72e-07 3.09e-06 8.73e-07 1.29e-06 4.87e-06 9.77e-07 5.13e-06 2.42e-06 5.67e-06 3.54e-06 7.42e-06 2.24e-06 1.43e-06 2.63e-06 2.01e-06 3.22e-06 1.41e-06 9.88e-07 2.29e-06 4.91e-06 3.82e-06 1.62e-06 6.41e-06 1.29e-06 2.55e-06 1.78e-06 4.36e-06 4.31e-06 2.85e-06 5.93e-07 7.91e-07 1.75e-06 2.23e-06 9e-07 9.22e-07 4.48e-07 1.06e-06 3.99e-07 1.51e-07 5.55e-06 5.05e-07 1.95e-07 3.13e-07 3.75e-07 8.22e-07 2.4e-07 3.24e-07
ENSG00000173846 PLK3 110183 4.63e-06 5.69e-06 7.53e-07 3.57e-06 1.31e-06 1.63e-06 6.35e-06 9.79e-07 5.05e-06 2.65e-06 6.7e-06 3.28e-06 8.29e-06 1.97e-06 1.23e-06 3.3e-06 1.82e-06 3.69e-06 1.55e-06 1.15e-06 2.95e-06 4.83e-06 4.56e-06 1.4e-06 7.71e-06 1.37e-06 2.55e-06 1.44e-06 4.47e-06 5.03e-06 2.69e-06 4.91e-07 5.68e-07 1.89e-06 1.93e-06 1.17e-06 9.11e-07 4.89e-07 9.46e-07 3.57e-07 2.4e-07 6.32e-06 4.47e-07 1.74e-07 4.13e-07 6.74e-07 8.74e-07 3.19e-07 3.74e-07
ENSG00000198520 ARMH1 235847 1.59e-06 2.43e-06 2.29e-07 1.49e-06 3.5e-07 6.27e-07 1.31e-06 4.33e-07 1.77e-06 7.18e-07 1.86e-06 1.12e-06 2.9e-06 8.3e-07 3.68e-07 9.55e-07 1.12e-06 1.18e-06 5.38e-07 4.58e-07 7.41e-07 1.96e-06 1.61e-06 6.43e-07 2.32e-06 6.42e-07 1.01e-06 1.1e-06 1.67e-06 1.68e-06 8.36e-07 2.96e-07 3.22e-07 5.79e-07 8.31e-07 6.16e-07 7.19e-07 2.29e-07 5.07e-07 3.35e-07 2.85e-07 2.46e-06 1.23e-07 4.23e-08 2.11e-07 2.28e-07 2.21e-07 4.79e-08 1.91e-07