Genes within 1Mb (chr1:44874976:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 941656 eQTL 4.66e-02 0.153 0.0769 0.0 0.0 0.0692
ENSG00000117408 IPO13 928026 eQTL 9.33e-02 0.0517 0.0308 0.00139 0.0 0.0692
ENSG00000126088 UROD -135974 pQTL 5.66e-16 -0.222 0.0271 0.0 0.0 0.0733
ENSG00000126088 UROD -135974 eQTL 9.24e-09 -0.233 0.0402 0.0 0.0 0.0692
ENSG00000142945 KIF2C 135158 eQTL 2.88e-02 -0.0721 0.0329 0.0 0.0 0.0692
ENSG00000173846 PLK3 74599 eQTL 4.67e-02 -0.0446 0.0224 0.0 0.0 0.0692
ENSG00000188396 TCTEX1D4 68301 eQTL 3.32e-02 0.056 0.0262 0.0 0.0 0.0692
ENSG00000196517 SLC6A9 843509 eQTL 2.72e-02 -0.144 0.0653 0.0 0.0 0.0692
ENSG00000222009 BTBD19 66494 eQTL 3.25e-07 0.147 0.0286 0.0 0.0 0.0692


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117448 \N -675567 5.14e-07 2.88e-07 1.05e-07 2.66e-07 1.05e-07 1.26e-07 3.44e-07 7.12e-08 2.6e-07 1.39e-07 3.25e-07 2.22e-07 4.27e-07 9.15e-08 1.32e-07 1.46e-07 8.74e-08 2.96e-07 1.5e-07 7.84e-08 1.59e-07 2.3e-07 2.2e-07 5.6e-08 4.11e-07 2.01e-07 1.78e-07 1.85e-07 1.76e-07 2.19e-07 1.86e-07 8.25e-08 5.64e-08 1.02e-07 1.67e-07 5.41e-08 7.74e-08 6.31e-08 5.25e-08 7.65e-08 4.4e-08 2.43e-07 1.96e-08 5.58e-09 8.59e-08 1.35e-08 9.19e-08 3.35e-09 5.35e-08
ENSG00000126088 UROD -135974 5.29e-06 7.18e-06 7.79e-07 3.51e-06 1.47e-06 1.52e-06 8.04e-06 1.18e-06 4.68e-06 3.17e-06 8.05e-06 2.94e-06 1.01e-05 2.33e-06 9.88e-07 4.31e-06 2.99e-06 3.71e-06 1.81e-06 1.68e-06 2.51e-06 6.43e-06 4.68e-06 1.88e-06 9.12e-06 2.09e-06 3.16e-06 2.1e-06 6.07e-06 5.44e-06 3.42e-06 5.55e-07 8.25e-07 2.26e-06 1.95e-06 1.35e-06 1.12e-06 5.58e-07 1.12e-06 6.69e-07 7.59e-07 8.34e-06 6.73e-07 1.73e-07 7.12e-07 9.68e-07 1.04e-06 6.91e-07 5.97e-07
ENSG00000142945 KIF2C 135158 5.58e-06 7.21e-06 7.77e-07 3.6e-06 1.56e-06 1.52e-06 8.05e-06 1.19e-06 4.75e-06 3.17e-06 8.17e-06 2.93e-06 1.02e-05 2.37e-06 1.02e-06 4.32e-06 2.92e-06 3.76e-06 1.81e-06 1.6e-06 2.66e-06 6.58e-06 4.66e-06 1.89e-06 9.25e-06 2.14e-06 3.22e-06 2.13e-06 6.12e-06 5.55e-06 3.29e-06 5.86e-07 8.41e-07 2.26e-06 2e-06 1.39e-06 1.13e-06 5.58e-07 1.12e-06 7.13e-07 7.81e-07 8.39e-06 6.89e-07 1.73e-07 7.41e-07 9.83e-07 1.01e-06 6.6e-07 5.96e-07
ENSG00000142959 \N 86806 9e-06 1.13e-05 1.56e-06 6.16e-06 2.42e-06 4.28e-06 1.14e-05 2.12e-06 9.95e-06 5.35e-06 1.33e-05 5.9e-06 1.68e-05 3.54e-06 3.15e-06 6.58e-06 4.93e-06 7.72e-06 3.02e-06 2.79e-06 5.7e-06 1e-05 8.51e-06 3.23e-06 1.66e-05 4.41e-06 5.85e-06 4.61e-06 1.15e-05 8.32e-06 6.28e-06 9.92e-07 1.17e-06 3.36e-06 4.62e-06 2.81e-06 1.83e-06 1.93e-06 2.15e-06 9.8e-07 9.48e-07 1.3e-05 1.48e-06 2.8e-07 7.99e-07 1.73e-06 1.73e-06 8.04e-07 4.9e-07
ENSG00000159592 \N -813137 3.21e-07 1.67e-07 7.16e-08 2.26e-07 1.1e-07 7.75e-08 2.4e-07 5.56e-08 1.86e-07 9.72e-08 1.83e-07 1.46e-07 2.38e-07 8.44e-08 6.93e-08 9.48e-08 4.63e-08 2.15e-07 7.11e-08 6.02e-08 1.24e-07 1.76e-07 1.68e-07 3.68e-08 2.36e-07 1.56e-07 1.31e-07 1.42e-07 1.37e-07 1.33e-07 1.22e-07 4.51e-08 4.16e-08 9.08e-08 5.41e-08 3.3e-08 5.26e-08 7.25e-08 6.45e-08 6.43e-08 4.89e-08 1.6e-07 3.13e-08 1.81e-08 3.71e-08 9.65e-09 7.61e-08 0.0 4.47e-08
ENSG00000188396 TCTEX1D4 68301 1.1e-05 1.33e-05 2.56e-06 8.12e-06 2.42e-06 5.83e-06 1.59e-05 2.45e-06 1.31e-05 6.52e-06 1.74e-05 6.8e-06 2.3e-05 4.76e-06 4.13e-06 8.21e-06 6.8e-06 1.06e-05 3.58e-06 3.53e-06 6.51e-06 1.24e-05 1.19e-05 3.99e-06 2.31e-05 4.67e-06 7.48e-06 5.51e-06 1.46e-05 1.12e-05 8.7e-06 9.94e-07 1.43e-06 3.8e-06 5.76e-06 3.03e-06 1.7e-06 2.15e-06 2.49e-06 1.5e-06 1.2e-06 1.69e-05 1.68e-06 3.59e-07 1.07e-06 2.35e-06 2.03e-06 8.83e-07 6.27e-07
ENSG00000196517 SLC6A9 843509 3.14e-07 1.59e-07 6.72e-08 2.24e-07 1.05e-07 8.89e-08 2.16e-07 5.62e-08 1.75e-07 9.35e-08 1.69e-07 1.31e-07 2.29e-07 8.07e-08 6.2e-08 9.11e-08 4.35e-08 1.91e-07 7.42e-08 6.16e-08 1.18e-07 1.65e-07 1.64e-07 3.42e-08 2.28e-07 1.43e-07 1.23e-07 1.28e-07 1.32e-07 1.24e-07 1.26e-07 4.85e-08 4.23e-08 9.81e-08 5.16e-08 3.11e-08 4.62e-08 7.63e-08 6.35e-08 5.96e-08 5.04e-08 1.59e-07 3.25e-08 1.75e-08 3.34e-08 6.98e-09 8.67e-08 0.0 4.68e-08
ENSG00000222009 BTBD19 66494 1.14e-05 1.38e-05 2.59e-06 8.32e-06 2.4e-06 5.83e-06 1.68e-05 2.46e-06 1.37e-05 6.68e-06 1.78e-05 6.86e-06 2.38e-05 5.19e-06 4.27e-06 8.68e-06 7.02e-06 1.11e-05 3.78e-06 3.59e-06 6.73e-06 1.26e-05 1.22e-05 4.21e-06 2.35e-05 4.5e-06 7.53e-06 5.79e-06 1.49e-05 1.14e-05 8.99e-06 1.03e-06 1.44e-06 3.93e-06 5.86e-06 3.29e-06 1.78e-06 2.29e-06 2.68e-06 1.6e-06 1.21e-06 1.71e-05 1.8e-06 3.55e-07 1.27e-06 2.36e-06 2.02e-06 8.61e-07 6.19e-07