Genes within 1Mb (chr1:44819376:A:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -967611 eQTL 1.75e-02 0.0516 0.0217 0.0 0.0 0.269
ENSG00000117425 PTCH2 -23877 eQTL 6.08e-04 0.0893 0.026 0.00485 0.00477 0.269
ENSG00000126088 UROD -191574 pQTL 3.40e-02 0.0344 0.0162 0.0 0.0 0.27
ENSG00000126088 UROD -191574 eQTL 1.62e-02 0.0551 0.0229 0.0 0.0 0.269
ENSG00000132763 MMACHC -680924 eQTL 2.13e-02 0.0776 0.0336 0.0 0.0 0.269
ENSG00000132781 MUTYH -521094 eQTL 2.04e-02 -0.0337 0.0145 0.0 0.0 0.269
ENSG00000142945 KIF2C 79558 eQTL 4.37e-02 -0.0373 0.0185 0.0 0.0 0.269
ENSG00000142959 BEST4 31206 eQTL 2.87e-02 0.0673 0.0307 0.0 0.0 0.269
ENSG00000159214 CCDC24 828017 eQTL 3.52e-02 0.0822 0.039 0.0 0.0 0.269
ENSG00000162415 ZSWIM5 -486833 eQTL 1.47e-03 -0.0735 0.023 0.0 0.0 0.269
ENSG00000188396 TCTEX1D4 12701 eQTL 9.10e-07 -0.0719 0.0146 0.00272 0.0291 0.269
ENSG00000222009 BTBD19 10894 eQTL 4.14e-45 -0.218 0.0146 0.028 0.0746 0.269
ENSG00000225721 AL592166.1 43566 eQTL 4.25e-02 0.08 0.0394 0.0 0.0 0.269
ENSG00000280670 CCDC163 -680703 eQTL 1.47e-13 0.299 0.0398 0.0 0.0 0.269


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117425 PTCH2 -23877 0.000102 3.89e-05 6.78e-06 1.65e-05 6.02e-06 2.21e-05 4.66e-05 5.19e-06 3.52e-05 1.69e-05 4.55e-05 1.95e-05 6.01e-05 1.36e-05 7.32e-06 2.35e-05 1.52e-05 3.23e-05 7.21e-06 7.8e-06 1.78e-05 4.38e-05 3.09e-05 8.8e-06 4.91e-05 1.05e-05 1.71e-05 1.36e-05 3.36e-05 2.32e-05 2.03e-05 1.75e-06 2.42e-06 6.6e-06 1.28e-05 5.16e-06 3.11e-06 3.73e-06 5.08e-06 3.48e-06 1.85e-06 4.61e-05 4.86e-06 4.31e-07 3.13e-06 3.93e-06 4.58e-06 1.64e-06 1.52e-06
ENSG00000187147 \N 414182 2.64e-07 1.08e-07 3.35e-08 1.78e-07 1.02e-07 9.36e-08 1.39e-07 5.24e-08 1.36e-07 4.23e-08 1.61e-07 7.6e-08 1.23e-07 6.07e-08 4.89e-08 7.76e-08 5.12e-08 1.07e-07 5.12e-08 3.29e-08 1.03e-07 1.31e-07 1.31e-07 5.01e-08 1.32e-07 1.09e-07 1.11e-07 8.45e-08 1.03e-07 1.09e-07 9.5e-08 3.52e-08 2.91e-08 8.3e-08 9.41e-08 4.02e-08 5.64e-08 8.78e-08 8.14e-08 3.09e-08 3.66e-08 1.39e-07 4.04e-08 7.2e-09 1.09e-07 1.8e-08 1.44e-07 4.7e-09 4.72e-08
ENSG00000188396 TCTEX1D4 12701 0.000107 5.79e-05 1.09e-05 2.27e-05 9.38e-06 3.06e-05 6.71e-05 9.72e-06 5.94e-05 3.1e-05 8.1e-05 3.32e-05 9.82e-05 2.39e-05 1.24e-05 4.11e-05 2.74e-05 4.77e-05 1.22e-05 1.32e-05 3.05e-05 7.34e-05 4.5e-05 1.42e-05 7.7e-05 2.03e-05 2.93e-05 2.46e-05 5.06e-05 3.66e-05 3.65e-05 3.79e-06 5.05e-06 9.11e-06 1.92e-05 8.73e-06 4.75e-06 6.26e-06 8.1e-06 4.37e-06 2.6e-06 6.64e-05 6.76e-06 9.41e-07 6.28e-06 7.37e-06 8.19e-06 3.82e-06 2.51e-06
ENSG00000222009 BTBD19 10894 0.000114 6.52e-05 1.28e-05 2.61e-05 1.05e-05 3.35e-05 7.73e-05 1.25e-05 6.78e-05 3.84e-05 9.33e-05 3.91e-05 0.000113 2.84e-05 1.42e-05 4.89e-05 3.18e-05 5.63e-05 1.35e-05 1.57e-05 3.51e-05 8.29e-05 5.12e-05 1.74e-05 9.17e-05 2.55e-05 3.64e-05 3.1e-05 5.77e-05 4.18e-05 4.26e-05 4.51e-06 5.68e-06 1.08e-05 2.16e-05 1.03e-05 5.36e-06 7.38e-06 9.18e-06 4.72e-06 2.65e-06 7.38e-05 7.32e-06 1.24e-06 7.01e-06 9.79e-06 9.82e-06 5.03e-06 3.28e-06
ENSG00000280670 CCDC163 -680703 2.6e-07 1.16e-07 3.41e-08 1.65e-07 1.03e-07 9.14e-08 1.31e-07 5.29e-08 1.33e-07 3.99e-08 1.55e-07 7.4e-08 1.2e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.88e-08 1.04e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.08e-07 9.43e-08 3.19e-08 2.75e-08 8.09e-08 1.03e-07 4.14e-08 4.7e-08 8.48e-08 8.44e-08 3.8e-08 3.18e-08 1.42e-07 4.51e-08 3.16e-08 1.15e-07 1.86e-08 1.5e-07 4.96e-09 4.72e-08