Genes within 1Mb (chr1:44771599:GT:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117408 IPO13 824649 eQTL 4.40e-02 0.0312 0.0155 0.0 0.0 0.498
ENSG00000117425 PTCH2 -71654 eQTL 4.37e-02 0.0472 0.0234 0.00132 0.0 0.498
ENSG00000126088 UROD -239351 pQTL 8.05e-35 -0.176 0.0139 0.0 0.0 0.497
ENSG00000126088 UROD -239351 eQTL 1.14e-11 -0.138 0.0201 0.0 0.0 0.498
ENSG00000126106 TMEM53 97118 eQTL 6.00e-01 -0.0134 0.0256 0.00104 0.0 0.498
ENSG00000132763 MMACHC -728701 eQTL 1.15e-02 0.0763 0.0302 0.0 0.0 0.498
ENSG00000142937 RPS8 -3652 eQTL 3.62e-02 0.0107 0.00511 0.00107 0.0 0.498
ENSG00000142945 KIF2C 31781 eQTL 3.97e-13 -0.119 0.0161 0.0 0.0 0.498
ENSG00000142959 BEST4 -16571 eQTL 2.19e-04 0.102 0.0274 0.00353 0.00298 0.498
ENSG00000173846 PLK3 -28778 eQTL 1.78e-04 -0.0422 0.0112 0.0 0.0 0.498
ENSG00000198520 ARMH1 96886 eQTL 2.05e-02 -0.0407 0.0175 0.0 0.0 0.498
ENSG00000222009 BTBD19 -36883 eQTL 1.20e-09 -0.0878 0.0143 0.00741 0.0 0.498
ENSG00000280670 CCDC163 -728480 eQTL 3.38e-07 0.186 0.0363 0.0 0.0 0.498


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126088 UROD -239351 2.14e-06 9.09e-07 6.26e-08 3.48e-07 1.07e-07 5.98e-07 1.2e-06 5.48e-08 3.62e-07 1.11e-07 8.28e-07 1.48e-07 1.48e-06 1.07e-07 4.12e-07 2.45e-07 1.17e-07 4.27e-07 8.68e-08 4.92e-08 2.52e-07 8.19e-07 6.63e-07 3.49e-08 5.75e-07 2.4e-07 1.83e-07 1.77e-07 5.7e-07 4.27e-07 1.88e-07 4.03e-08 3.59e-08 1.17e-07 6.78e-08 2.85e-08 5.65e-08 9.03e-08 4.9e-08 8.61e-08 6e-08 7.11e-06 5.54e-08 1.43e-08 7.79e-08 1.81e-08 1.19e-07 4.5e-09 5.04e-08
ENSG00000142945 KIF2C 31781 0.000112 5.04e-05 1.34e-06 4.79e-06 2.36e-06 1.41e-05 2.83e-05 1.16e-06 1.06e-05 4.42e-06 1.57e-05 5.09e-06 2.75e-05 3.72e-06 5.1e-06 1.13e-05 5.67e-06 1.97e-05 2.54e-06 1.41e-06 5.79e-06 3.13e-05 1.37e-05 2.85e-06 2.54e-05 4.41e-06 7.99e-06 4.06e-06 1.59e-05 7.69e-06 5.02e-06 5.26e-07 7.23e-07 1.96e-06 2.74e-06 9.06e-07 8.12e-07 4.39e-07 8.53e-07 5.91e-07 4.94e-07 9.67e-05 2.66e-06 1.56e-07 7.83e-07 1.7e-06 2.1e-06 2.3e-07 1.74e-07
ENSG00000142959 BEST4 -16571 0.000151 0.000107 2.51e-06 9.64e-06 5.01e-06 2.61e-05 5.64e-05 2.78e-06 2.55e-05 8.01e-06 3.73e-05 9.22e-06 5.93e-05 1.07e-05 8.53e-06 3.44e-05 1.33e-05 3.71e-05 3.79e-06 2.84e-06 1.05e-05 7.39e-05 2.73e-05 5.66e-06 5.96e-05 5.97e-06 2.2e-05 8.09e-06 3.01e-05 1.18e-05 1.29e-05 5.55e-07 1.28e-06 2.92e-06 6.34e-06 2.1e-06 1.06e-06 2.07e-06 2.12e-06 1e-06 8.59e-07 0.000132 4.51e-06 2.09e-07 2.06e-06 2.96e-06 3.74e-06 6.91e-07 5.64e-07
ENSG00000173846 PLK3 -28778 0.000121 5.98e-05 1.25e-06 5.17e-06 2.55e-06 1.64e-05 3.36e-05 1.29e-06 1.28e-05 4.76e-06 1.79e-05 5.73e-06 3.17e-05 4.19e-06 5.38e-06 1.35e-05 6.78e-06 2.26e-05 2.53e-06 1.71e-06 6.52e-06 3.87e-05 1.61e-05 3.21e-06 2.84e-05 4.52e-06 9.03e-06 4.78e-06 1.77e-05 7.73e-06 5.9e-06 5.76e-07 8.97e-07 2.22e-06 3.55e-06 9.43e-07 8.88e-07 5e-07 9.67e-07 6.69e-07 6.15e-07 0.000104 2.67e-06 1.5e-07 7.67e-07 1.85e-06 2.5e-06 2.32e-07 2.87e-07
ENSG00000222009 BTBD19 -36883 9.22e-05 3.54e-05 1.31e-06 3.92e-06 2.58e-06 1.02e-05 2.18e-05 1.04e-06 8.75e-06 3.16e-06 1.24e-05 4.03e-06 2.16e-05 3.88e-06 4.5e-06 9.06e-06 4.17e-06 1.52e-05 1.99e-06 1.09e-06 4.67e-06 2.26e-05 1.11e-05 1.95e-06 1.98e-05 3.12e-06 7.29e-06 3.24e-06 1.33e-05 6.17e-06 4.06e-06 4.33e-07 6.68e-07 1.57e-06 1.97e-06 9.72e-07 7.24e-07 4.26e-07 8.94e-07 3.71e-07 4.03e-07 9.11e-05 2.34e-06 1.64e-07 6.37e-07 1.8e-06 1.72e-06 1.97e-07 2.31e-07
ENSG00000280670 CCDC163 -728480 3.62e-07 1.1e-07 3.28e-08 1.7e-07 1.02e-07 9.76e-08 1.42e-07 5.29e-08 1.41e-07 4.23e-08 1.6e-07 7.58e-08 1.41e-07 6.21e-08 5.4e-08 7.89e-08 5.12e-08 1.07e-07 5.12e-08 2.88e-08 1.03e-07 1.27e-07 1.26e-07 5.23e-08 1.29e-07 1.09e-07 1.13e-07 8.45e-08 1.02e-07 1.1e-07 9.75e-08 3.19e-08 2.75e-08 8.25e-08 9.56e-08 4.14e-08 4.7e-08 8.28e-08 8.14e-08 3.74e-08 3.66e-08 3.43e-07 3.93e-08 4.26e-08 1.15e-07 1.74e-08 1.5e-07 4.96e-09 4.72e-08