Genes within 1Mb (chr1:44756799:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 823479 eQTL 1.93e-02 -0.116 0.0495 0.0 0.0 0.196
ENSG00000117425 PTCH2 -86454 eQTL 1.31e-02 0.0744 0.0299 0.00149 0.0 0.196
ENSG00000132763 MMACHC -743501 eQTL 1.33e-02 0.0959 0.0387 0.0 0.0 0.196
ENSG00000132781 MUTYH -583671 eQTL 1.55e-05 -0.0719 0.0165 0.00809 0.00915 0.196
ENSG00000142945 KIF2C 16981 eQTL 2.02e-02 -0.0493 0.0212 0.0 0.0 0.196
ENSG00000142959 BEST4 -31371 eQTL 5.50e-04 0.122 0.0352 0.00196 0.00147 0.196
ENSG00000162415 ZSWIM5 -549410 eQTL 6.47e-03 -0.0724 0.0265 0.0 0.0 0.196
ENSG00000173846 PLK3 -43578 eQTL 1.90e-02 0.0339 0.0144 0.0 0.0 0.196
ENSG00000188396 TCTEX1D4 -49876 eQTL 9.92e-04 -0.0557 0.0169 0.0 0.0 0.196
ENSG00000198520 ARMH1 82086 eQTL 5.30e-02 -0.0435 0.0225 0.00139 0.0 0.196
ENSG00000222009 BTBD19 -51683 eQTL 2.88e-28 -0.2 0.0175 0.0 0.0 0.196
ENSG00000230615 AL139220.2 726356 eQTL 4.07e-02 0.0776 0.0379 0.0 0.0 0.196
ENSG00000280670 CCDC163 -743280 eQTL 2.60e-14 0.354 0.0457 0.0 0.0 0.196


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000142959 BEST4 -31371 1.05e-05 1.27e-05 1.33e-06 6.54e-06 2.44e-06 5.16e-06 1.25e-05 2.09e-06 1.06e-05 5.4e-06 1.49e-05 6.14e-06 2e-05 4.19e-06 3.4e-06 6.43e-06 5.51e-06 7.72e-06 3.07e-06 2.86e-06 5.35e-06 1.04e-05 9.94e-06 3.24e-06 1.83e-05 3.88e-06 5.19e-06 4.58e-06 1.15e-05 1.05e-05 6.74e-06 9.46e-07 1.21e-06 3.14e-06 5.12e-06 2.62e-06 1.85e-06 1.86e-06 2.25e-06 1.01e-06 1.02e-06 1.54e-05 1.42e-06 1.59e-07 6.94e-07 1.82e-06 1.27e-06 8.28e-07 6e-07
ENSG00000188396 TCTEX1D4 -49876 7.82e-06 9.76e-06 7.35e-07 4.56e-06 1.89e-06 4.1e-06 9.8e-06 1.54e-06 7.74e-06 4.29e-06 1.1e-05 4.97e-06 1.36e-05 3.88e-06 2.07e-06 5.24e-06 3.96e-06 4.46e-06 2.58e-06 1.99e-06 3.57e-06 7.74e-06 6.78e-06 2.27e-06 1.28e-05 2.58e-06 3.96e-06 2.84e-06 7.5e-06 7.8e-06 4.54e-06 4.88e-07 8e-07 2.74e-06 3.62e-06 2.1e-06 1.39e-06 1.29e-06 1.42e-06 9.15e-07 7.51e-07 1.18e-05 8.82e-07 1.61e-07 6.67e-07 1.02e-06 1.04e-06 6.58e-07 4.23e-07
ENSG00000222009 BTBD19 -51683 7.79e-06 9.32e-06 7.79e-07 4.32e-06 1.84e-06 3.9e-06 9.6e-06 1.45e-06 7.4e-06 4.33e-06 1.05e-05 4.86e-06 1.32e-05 3.95e-06 1.83e-06 4.87e-06 3.84e-06 4.08e-06 2.57e-06 1.79e-06 3.46e-06 7.65e-06 6.79e-06 2.14e-06 1.24e-05 2.42e-06 3.82e-06 2.64e-06 7.34e-06 7.87e-06 4.49e-06 4.74e-07 6.72e-07 2.75e-06 3.58e-06 2.03e-06 1.38e-06 1.08e-06 1.38e-06 8.53e-07 7.2e-07 1.16e-05 8.89e-07 1.58e-07 6.07e-07 1.01e-06 9.77e-07 6.92e-07 4.54e-07
ENSG00000280670 CCDC163 -743280 2.69e-07 1.27e-07 3.88e-08 1.89e-07 9.24e-08 9.91e-08 1.49e-07 5.4e-08 1.44e-07 4.74e-08 1.57e-07 8.55e-08 1.41e-07 6.76e-08 6.17e-08 7.37e-08 3.87e-08 1.26e-07 6.07e-08 4.16e-08 1.21e-07 1.27e-07 1.39e-07 3.03e-08 1.4e-07 1.21e-07 1.06e-07 9.65e-08 1.09e-07 1.03e-07 9.7e-08 3.06e-08 4.02e-08 8e-08 5.64e-08 3.62e-08 5.35e-08 8.89e-08 6.43e-08 3.67e-08 5.03e-08 1.33e-07 5.2e-08 1.85e-08 3.84e-08 1.86e-08 1.21e-07 1.9e-09 4.99e-08