Genes within 1Mb (chr1:44725809:AGGC:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117408 IPO13 778859 eQTL 1.65e-02 0.0438 0.0182 0.00188 0.0 0.251
ENSG00000126088 UROD -285141 pQTL 2.26e-53 -0.25 0.0155 0.0 0.0 0.252
ENSG00000126088 UROD -285141 eQTL 1.44e-19 -0.215 0.0233 0.0 0.0 0.251
ENSG00000126107 HECTD3 -285515 eQTL 4.28e-02 0.0396 0.0195 0.0 0.0 0.251
ENSG00000132768 DPH2 755809 eQTL 2.97e-02 0.0324 0.0149 0.0 0.0 0.251
ENSG00000132781 MUTYH -614661 eQTL 1.26e-02 0.0384 0.0153 0.0 0.0 0.251
ENSG00000142945 KIF2C -14009 eQTL 4.68e-10 -0.121 0.0192 0.00136 0.0015 0.251
ENSG00000159588 CCDC17 -898248 eQTL 2.72e-02 -0.0366 0.0166 0.0 0.0 0.251
ENSG00000173846 PLK3 -74568 eQTL 2.91e-08 -0.0734 0.0131 0.0 0.0 0.251
ENSG00000188396 TCTEX1D4 -80866 eQTL 5.28e-03 0.0435 0.0156 0.0 0.0 0.251
ENSG00000198520 ARMH1 51096 eQTL 1.01e-02 -0.0533 0.0207 0.0 0.0 0.251
ENSG00000222009 BTBD19 -82673 eQTL 5.63e-08 0.0928 0.0169 0.0 0.0 0.251
ENSG00000230896 AL604028.1 -971266 eQTL 3.22e-02 -0.0947 0.0441 0.00105 0.0 0.251


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N -765354 8.7e-07 9e-07 3.58e-07 3.05e-07 9.93e-08 2.54e-07 5.31e-07 5.53e-08 8.36e-07 1.28e-07 9.73e-07 5.53e-07 1.48e-06 2.57e-07 1.48e-07 3.96e-07 8.64e-08 4.72e-07 2.79e-07 4.92e-08 2.8e-07 7.58e-07 4.77e-07 4.07e-08 7.71e-07 2.4e-07 1.57e-07 1.12e-07 6.76e-07 5.56e-07 2.54e-07 3.72e-08 3.16e-08 1.49e-07 2.32e-07 4.77e-08 5.26e-08 7.49e-08 6.76e-08 3.8e-08 4e-08 1.6e-06 3.4e-08 1.06e-07 6.38e-08 6.98e-09 8.67e-08 1.88e-09 5.09e-08
ENSG00000126088 UROD -285141 4.65e-06 9.3e-06 2.47e-06 3.34e-06 1.61e-06 1.93e-06 5.13e-06 6.93e-07 6.18e-06 2.35e-06 5.59e-06 3.57e-06 9.46e-06 3.22e-06 1e-06 4.67e-06 2e-06 5.78e-06 2.72e-06 1.37e-06 5.87e-06 8.59e-06 5.83e-06 1.4e-06 6.41e-06 3.49e-06 1.88e-06 1.8e-06 7.08e-06 4.04e-06 2.77e-06 3.87e-08 3.78e-07 1.77e-06 1.97e-06 1.16e-06 1.19e-06 1.43e-06 1.27e-06 3.65e-07 2.59e-07 1.6e-05 4e-07 1.55e-06 3.63e-07 5.87e-07 9.05e-07 5.83e-07 3.6e-07
ENSG00000132768 DPH2 755809 9.14e-07 9.37e-07 3.45e-07 3.19e-07 1.1e-07 2.63e-07 5.54e-07 5.43e-08 8.29e-07 1.37e-07 1.02e-06 5.5e-07 1.46e-06 2.61e-07 1.57e-07 4.14e-07 8.74e-08 5.16e-07 2.87e-07 5.04e-08 2.97e-07 8.19e-07 5.21e-07 4.27e-08 8.09e-07 2.42e-07 1.72e-07 1.12e-07 6.84e-07 5.82e-07 2.73e-07 3.95e-08 3.35e-08 1.5e-07 2.43e-07 4.95e-08 6.14e-08 7.51e-08 6.42e-08 3.86e-08 3.91e-08 1.62e-06 3.25e-08 1.3e-07 5.87e-08 9.44e-09 7.92e-08 1.88e-09 4.85e-08
ENSG00000142945 KIF2C -14009 0.000391 0.000453 7.64e-05 0.000175 0.00012 0.000178 0.000437 9.63e-05 0.000415 0.000208 0.000458 0.000228 0.000567 0.000189 9.84e-05 0.000285 0.000192 0.000295 0.000149 0.000104 0.000288 0.000452 0.000389 0.000164 0.000502 0.000194 0.000224 0.000183 0.000452 0.000196 0.000258 4.48e-05 4.79e-05 8.15e-05 0.000103 8.23e-05 5.88e-05 6.23e-05 6.53e-05 4.15e-05 3.49e-05 0.000514 6.77e-05 7.21e-06 6.39e-05 7.49e-05 9.22e-05 5.18e-05 4.92e-05
ENSG00000142959 \N -62361 0.000222 0.000192 4.61e-05 0.000107 3.49e-05 0.000105 0.000227 2.85e-05 0.000243 0.000105 0.00024 0.000119 0.000323 6.85e-05 3.91e-05 0.000159 9.46e-05 0.000187 5.99e-05 6.1e-05 0.000181 0.000261 0.000237 7.89e-05 0.000279 0.000112 9.07e-05 6.87e-05 0.000262 8.87e-05 0.00015 1.93e-05 2.83e-05 5.79e-05 5.73e-05 4.43e-05 3.37e-05 3.54e-05 3.46e-05 2.17e-05 2.65e-05 0.000413 3.89e-05 6.25e-06 3.46e-05 4.33e-05 5.08e-05 2.35e-05 2.04e-05
ENSG00000159588 CCDC17 -898248 5.74e-07 6.26e-07 2.1e-07 2.26e-07 1.05e-07 1.54e-07 3.57e-07 5.19e-08 4.18e-07 8.53e-08 4.88e-07 3.48e-07 9.44e-07 1.54e-07 6.27e-08 2.08e-07 4.18e-08 3.58e-07 1.5e-07 4e-08 2.09e-07 4.14e-07 3.11e-07 2.91e-08 3.98e-07 1.71e-07 1.2e-07 9.74e-08 3.58e-07 2.39e-07 1.59e-07 3.59e-08 2.92e-08 1.03e-07 6.35e-08 2.95e-08 5.29e-08 9.36e-08 6.56e-08 3.18e-08 3.16e-08 1.3e-06 5.21e-08 2.65e-08 8.16e-08 1.92e-08 1.22e-07 3.95e-09 4.77e-08
ENSG00000173846 PLK3 -74568 0.000197 0.000151 3.92e-05 9.35e-05 2.69e-05 9e-05 0.000187 2.08e-05 0.000204 7.91e-05 0.000186 8.99e-05 0.000261 5.08e-05 3.1e-05 0.000124 7.71e-05 0.000157 4.4e-05 5.23e-05 0.000161 0.000219 0.000198 6.65e-05 0.00022 9.42e-05 6.74e-05 5.28e-05 0.000223 7.3e-05 0.000113 1.36e-05 2.2e-05 4.68e-05 4.64e-05 3.43e-05 2.98e-05 3.45e-05 2.41e-05 1.83e-05 2.24e-05 0.000368 2.89e-05 6.21e-06 2.49e-05 3.56e-05 4.65e-05 2.06e-05 1.76e-05
ENSG00000188396 TCTEX1D4 -80866 0.000187 0.00014 3.55e-05 8.34e-05 2.41e-05 8.03e-05 0.000166 1.81e-05 0.000184 6.67e-05 0.000161 7.95e-05 0.000229 4.57e-05 2.81e-05 0.000106 6.79e-05 0.000141 3.91e-05 4.41e-05 0.000151 0.000193 0.00018 5.75e-05 0.000189 8.55e-05 5.71e-05 4.64e-05 0.0002 6.37e-05 9.4e-05 1.01e-05 1.81e-05 3.96e-05 4.06e-05 2.78e-05 2.67e-05 3.36e-05 2e-05 1.58e-05 2.19e-05 0.000342 2.53e-05 6.29e-06 2.03e-05 3.04e-05 4.26e-05 1.87e-05 1.66e-05
ENSG00000198520 ARMH1 51096 0.000261 0.00024 4.89e-05 0.000119 4.69e-05 0.000118 0.000274 4.19e-05 0.000286 0.000137 0.000301 0.000147 0.000382 8.61e-05 4.99e-05 0.000197 0.000118 0.000215 7.46e-05 6.72e-05 0.000201 0.000309 0.000269 8.9e-05 0.000334 0.00013 0.000117 9.12e-05 0.000292 0.000105 0.000181 2.45e-05 3.19e-05 6.24e-05 6.77e-05 5.02e-05 3.59e-05 3.94e-05 4.32e-05 2.55e-05 2.91e-05 0.000445 4.69e-05 6.31e-06 3.98e-05 4.56e-05 5.6e-05 2.54e-05 2.29e-05
ENSG00000222009 BTBD19 -82673 0.000184 0.000134 3.51e-05 8.07e-05 2.3e-05 7.71e-05 0.000159 1.72e-05 0.00018 6.45e-05 0.000156 7.47e-05 0.000223 4.31e-05 2.71e-05 0.000101 6.7e-05 0.000136 3.76e-05 4.24e-05 0.000146 0.00019 0.000174 5.49e-05 0.000182 8.21e-05 5.45e-05 4.46e-05 0.000193 6.09e-05 9.07e-05 9.15e-06 1.63e-05 3.8e-05 3.91e-05 2.64e-05 2.63e-05 3.25e-05 1.92e-05 1.47e-05 2.21e-05 0.000327 2.41e-05 6.32e-06 1.88e-05 2.88e-05 4.17e-05 1.83e-05 1.63e-05
ENSG00000281912 \N -578101 1.27e-06 1.36e-06 3.08e-07 3.65e-07 1.87e-07 4.81e-07 1.09e-06 7.98e-08 1.5e-06 3.16e-07 1.52e-06 9.12e-07 2.51e-06 4.76e-07 4.35e-07 9.54e-07 6.44e-07 1.06e-06 7.98e-07 8.41e-08 6.27e-07 1.96e-06 9.35e-07 1.91e-07 1.94e-06 3.71e-07 4.25e-07 1.88e-07 1.55e-06 1.08e-06 5.39e-07 3.68e-08 3.65e-08 5.28e-07 3.22e-07 2.58e-07 1.83e-07 1.23e-07 4.17e-08 8.61e-08 5.13e-08 3.32e-06 4.47e-08 1.67e-07 3.55e-08 1.46e-08 1.26e-07 2.89e-09 4.72e-08