Genes within 1Mb (chr1:44714453:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117408 IPO13 767503 eQTL 4.02e-02 0.0329 0.016 0.0 0.0 0.48
ENSG00000126088 UROD -296497 pQTL 2.20e-29 -0.166 0.0144 0.0 0.0 0.477
ENSG00000126088 UROD -296497 eQTL 1.75e-08 -0.119 0.021 0.0 0.0 0.48
ENSG00000142937 RPS8 -60798 eQTL 3.85e-02 0.011 0.00529 0.00106 0.0 0.48
ENSG00000142945 KIF2C -25365 eQTL 1.82e-12 -0.12 0.0167 0.0 0.0 0.48
ENSG00000142959 BEST4 -73717 eQTL 4.01e-03 0.0821 0.0285 0.0 0.0 0.48
ENSG00000162415 ZSWIM5 -591756 eQTL 4.78e-02 -0.0425 0.0215 0.0 0.0 0.48
ENSG00000173846 PLK3 -85924 eQTL 1.20e-03 -0.0378 0.0116 0.0 0.0 0.48
ENSG00000222009 BTBD19 -94029 eQTL 9.41e-08 -0.08 0.0149 0.0 0.0 0.48
ENSG00000280670 CCDC163 -785626 eQTL 4.54e-06 0.174 0.0377 0.0 0.0 0.48


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126088 UROD -296497 1.27e-06 9.88e-07 3.22e-07 7.96e-07 2.71e-07 4.9e-07 1.16e-06 3.46e-07 1.15e-06 4.11e-07 1.39e-06 6.02e-07 1.86e-06 3.03e-07 4.36e-07 7e-07 8.19e-07 5.8e-07 6.91e-07 6.76e-07 5.47e-07 1.05e-06 8.27e-07 5.86e-07 1.94e-06 3.71e-07 6.53e-07 5.78e-07 1.02e-06 1.25e-06 5.45e-07 1.55e-07 2.14e-07 5.46e-07 5.46e-07 4.47e-07 5.22e-07 2.38e-07 3.89e-07 1.3e-07 2.83e-07 1.53e-06 6.17e-08 5.71e-08 1.74e-07 9.77e-08 1.93e-07 8.42e-08 1.04e-07
ENSG00000132780 \N -869393 2.69e-07 1.3e-07 4.69e-08 1.83e-07 9.79e-08 9.9e-08 1.53e-07 5.53e-08 1.44e-07 5.42e-08 1.57e-07 8.68e-08 1.45e-07 7.13e-08 6.04e-08 7.53e-08 4.09e-08 1.26e-07 6.07e-08 4.21e-08 1.26e-07 1.28e-07 1.44e-07 2.64e-08 1.46e-07 1.21e-07 1.07e-07 9.65e-08 1.12e-07 1.07e-07 9.7e-08 3.03e-08 3.73e-08 8.11e-08 6.34e-08 3.28e-08 5.74e-08 8.76e-08 6.71e-08 4.19e-08 5e-08 1.4e-07 5.21e-08 1.43e-08 3.42e-08 1.86e-08 1.22e-07 1.9e-09 4.82e-08
ENSG00000142945 KIF2C -25365 1.36e-05 1.6e-05 2.45e-06 8.75e-06 2.47e-06 6.44e-06 1.95e-05 2.51e-06 1.45e-05 7.23e-06 1.94e-05 7.65e-06 2.69e-05 6.43e-06 4.47e-06 9.08e-06 8.2e-06 1.18e-05 4.11e-06 3.64e-06 7.19e-06 1.36e-05 1.4e-05 4.52e-06 2.49e-05 5.05e-06 7.46e-06 5.98e-06 1.54e-05 1.52e-05 1.03e-05 1.08e-06 1.44e-06 4e-06 6.62e-06 3.58e-06 1.71e-06 2.4e-06 2.65e-06 1.65e-06 1.11e-06 1.97e-05 2.39e-06 1.88e-07 9.9e-07 2.35e-06 2.32e-06 8.29e-07 4.78e-07
ENSG00000142959 BEST4 -73717 6.01e-06 8.97e-06 7.57e-07 3.8e-06 1.74e-06 2.59e-06 8.96e-06 1.29e-06 5.5e-06 3.86e-06 8.95e-06 3.93e-06 1.13e-05 3.9e-06 1.2e-06 4.41e-06 3.76e-06 3.78e-06 2.02e-06 1.98e-06 3.16e-06 7.11e-06 5.56e-06 1.95e-06 1.02e-05 2.25e-06 3.16e-06 2.1e-06 6.69e-06 7.79e-06 4.1e-06 4.44e-07 7.94e-07 2.53e-06 2.91e-06 1.68e-06 1.18e-06 1.03e-06 1.36e-06 7.61e-07 7.69e-07 8.77e-06 9.07e-07 1.64e-07 7.84e-07 9.91e-07 9.59e-07 7.24e-07 5.14e-07
ENSG00000173846 PLK3 -85924 4.83e-06 7.21e-06 6.41e-07 3.5e-06 1.73e-06 1.55e-06 7.57e-06 1.25e-06 4.66e-06 3.09e-06 8.09e-06 2.94e-06 1.02e-05 3.14e-06 9.99e-07 4.09e-06 3.13e-06 3.99e-06 1.55e-06 1.47e-06 2.8e-06 5.44e-06 4.69e-06 1.94e-06 8.92e-06 2.06e-06 2.28e-06 1.74e-06 5.37e-06 6.62e-06 3.4e-06 4.02e-07 7.38e-07 2.15e-06 2.38e-06 1.22e-06 1.07e-06 5.42e-07 9.04e-07 6.06e-07 6.15e-07 8.58e-06 6.4e-07 1.66e-07 5.77e-07 1.13e-06 1.13e-06 6.9e-07 3.91e-07
ENSG00000222009 BTBD19 -94029 4.9e-06 5.93e-06 7.3e-07 3.52e-06 1.57e-06 1.53e-06 6.46e-06 1.17e-06 4.85e-06 2.81e-06 7.19e-06 2.97e-06 9.25e-06 2.32e-06 1.17e-06 3.83e-06 2.73e-06 3.95e-06 1.44e-06 1.37e-06 2.83e-06 4.88e-06 4.62e-06 1.57e-06 8.52e-06 2.01e-06 2.29e-06 1.62e-06 4.47e-06 5.83e-06 2.65e-06 5.4e-07 5.21e-07 1.65e-06 1.97e-06 1.18e-06 1.06e-06 4.66e-07 8.77e-07 5.01e-07 4.94e-07 7.48e-06 5.97e-07 1.85e-07 5.96e-07 1.02e-06 1.02e-06 6.45e-07 3.73e-07