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Genes within 1Mb (chr1:44351432:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 701283 sc-eQTL 9.19e-01 0.0242 0.237 0.051 B_Activated L2
ENSG00000066322 ELOVL1 983358 sc-eQTL 7.40e-01 0.0813 0.245 0.051 B_Activated L2
ENSG00000070785 EIF2B3 -635290 sc-eQTL 1.45e-01 0.329 0.225 0.051 B_Activated L2
ENSG00000117408 IPO13 404482 sc-eQTL 9.31e-01 0.0182 0.211 0.051 B_Activated L2
ENSG00000117410 ATP6V0B 376945 sc-eQTL 8.28e-01 -0.0453 0.208 0.051 B_Activated L2
ENSG00000117411 B4GALT2 372489 sc-eQTL 2.25e-01 -0.235 0.193 0.051 B_Activated L2
ENSG00000117419 ERI3 -3828 sc-eQTL 1.48e-01 -0.355 0.244 0.051 B_Activated L2
ENSG00000117425 PTCH2 -491821 sc-eQTL 5.30e-01 -0.0864 0.137 0.051 B_Activated L2
ENSG00000126088 UROD -659518 sc-eQTL 1.85e-01 0.315 0.236 0.051 B_Activated L2
ENSG00000126091 ST3GAL3 645608 sc-eQTL 4.08e-01 -0.183 0.221 0.051 B_Activated L2
ENSG00000126106 TMEM53 -323049 sc-eQTL 4.50e-01 0.152 0.2 0.051 B_Activated L2
ENSG00000126107 HECTD3 -659892 sc-eQTL 5.46e-01 0.139 0.23 0.051 B_Activated L2
ENSG00000132768 DPH2 381432 sc-eQTL 2.79e-01 -0.251 0.231 0.051 B_Activated L2
ENSG00000132773 TOE1 -988620 sc-eQTL 2.49e-01 -0.261 0.225 0.051 B_Activated L2
ENSG00000132781 MUTYH -989461 sc-eQTL 5.84e-01 0.13 0.236 0.051 B_Activated L2
ENSG00000142937 RPS8 -423819 sc-eQTL 2.99e-01 0.123 0.118 0.051 B_Activated L2
ENSG00000159214 CCDC24 360073 sc-eQTL 7.26e-01 -0.0699 0.199 0.051 B_Activated L2
ENSG00000159479 MED8 961624 sc-eQTL 4.76e-01 0.164 0.23 0.051 B_Activated L2
ENSG00000173846 PLK3 -448945 sc-eQTL 3.74e-01 0.191 0.215 0.051 B_Activated L2
ENSG00000178028 DMAP1 137977 sc-eQTL 4.27e-01 -0.193 0.242 0.051 B_Activated L2
ENSG00000178922 HYI 897443 sc-eQTL 2.99e-01 -0.234 0.224 0.051 B_Activated L2
ENSG00000187147 RNF220 -53762 sc-eQTL 8.32e-01 0.0469 0.22 0.051 B_Activated L2
ENSG00000198198 SZT2 961550 sc-eQTL 7.63e-01 0.066 0.219 0.051 B_Activated L2
ENSG00000198520 ARMH1 -323260 sc-eQTL 7.55e-02 -0.383 0.214 0.051 B_Activated L2
ENSG00000066135 KDM4A 701283 sc-eQTL 5.68e-01 -0.125 0.218 0.053 NK_HLA L2
ENSG00000066322 ELOVL1 983358 sc-eQTL 4.68e-01 0.151 0.207 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -635290 sc-eQTL 3.84e-01 0.184 0.211 0.053 NK_HLA L2
ENSG00000117408 IPO13 404482 sc-eQTL 8.54e-01 -0.0365 0.198 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 376945 sc-eQTL 5.39e-01 -0.126 0.205 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 372489 sc-eQTL 5.51e-01 -0.114 0.191 0.053 NK_HLA L2
ENSG00000117419 ERI3 -3828 sc-eQTL 4.43e-01 -0.164 0.214 0.053 NK_HLA L2
ENSG00000126088 UROD -659518 sc-eQTL 1.28e-02 0.528 0.21 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 645608 sc-eQTL 1.65e-01 0.294 0.211 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -323049 sc-eQTL 5.50e-01 0.121 0.202 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -659892 sc-eQTL 1.96e-01 0.292 0.225 0.053 NK_HLA L2
ENSG00000132768 DPH2 381432 sc-eQTL 8.02e-01 -0.0547 0.218 0.053 NK_HLA L2
ENSG00000132773 TOE1 -988620 sc-eQTL 1.85e-01 0.277 0.208 0.053 NK_HLA L2
ENSG00000132781 MUTYH -989461 sc-eQTL 9.42e-01 0.016 0.218 0.053 NK_HLA L2
ENSG00000142937 RPS8 -423819 sc-eQTL 4.00e-02 0.189 0.0914 0.053 NK_HLA L2
ENSG00000159214 CCDC24 360073 sc-eQTL 1.46e-01 -0.285 0.195 0.053 NK_HLA L2
ENSG00000159479 MED8 961624 sc-eQTL 3.98e-01 -0.192 0.227 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -954777 sc-eQTL 1.65e-01 0.261 0.188 0.053 NK_HLA L2
ENSG00000173846 PLK3 -448945 sc-eQTL 5.82e-01 0.105 0.191 0.053 NK_HLA L2
ENSG00000178028 DMAP1 137977 sc-eQTL 9.83e-01 -0.00468 0.215 0.053 NK_HLA L2
ENSG00000178922 HYI 897443 sc-eQTL 7.32e-01 0.0703 0.205 0.053 NK_HLA L2
ENSG00000187147 RNF220 -53762 sc-eQTL 3.13e-01 0.186 0.184 0.053 NK_HLA L2
ENSG00000198198 SZT2 961550 sc-eQTL 8.75e-01 -0.0287 0.182 0.053 NK_HLA L2
ENSG00000066135 KDM4A 701283 sc-eQTL 4.44e-01 0.163 0.213 0.051 intMono L2
ENSG00000066322 ELOVL1 983358 sc-eQTL 4.32e-01 0.147 0.187 0.051 intMono L2
ENSG00000070785 EIF2B3 -635290 sc-eQTL 4.45e-01 -0.164 0.214 0.051 intMono L2
ENSG00000117408 IPO13 404482 sc-eQTL 1.01e-01 -0.327 0.198 0.051 intMono L2
ENSG00000117410 ATP6V0B 376945 sc-eQTL 7.10e-01 -0.048 0.129 0.051 intMono L2
ENSG00000117419 ERI3 -3828 sc-eQTL 6.32e-01 -0.101 0.211 0.051 intMono L2
ENSG00000117425 PTCH2 -491821 sc-eQTL 2.87e-01 0.186 0.174 0.051 intMono L2
ENSG00000126088 UROD -659518 sc-eQTL 4.21e-01 -0.168 0.209 0.051 intMono L2
ENSG00000126091 ST3GAL3 645608 sc-eQTL 9.50e-01 -0.0126 0.202 0.051 intMono L2
ENSG00000126106 TMEM53 -323049 sc-eQTL 3.75e-01 0.175 0.197 0.051 intMono L2
ENSG00000126107 HECTD3 -659892 sc-eQTL 4.64e-01 0.151 0.206 0.051 intMono L2
ENSG00000132768 DPH2 381432 sc-eQTL 8.84e-01 -0.0299 0.205 0.051 intMono L2
ENSG00000132773 TOE1 -988620 sc-eQTL 7.86e-01 -0.0569 0.209 0.051 intMono L2
ENSG00000132781 MUTYH -989461 sc-eQTL 3.92e-02 0.385 0.185 0.051 intMono L2
ENSG00000142937 RPS8 -423819 sc-eQTL 7.29e-01 0.0306 0.0881 0.051 intMono L2
ENSG00000159214 CCDC24 360073 sc-eQTL 4.44e-01 0.148 0.193 0.051 intMono L2
ENSG00000159479 MED8 961624 sc-eQTL 1.02e-01 0.273 0.166 0.051 intMono L2
ENSG00000173846 PLK3 -448945 sc-eQTL 2.18e-01 -0.18 0.146 0.051 intMono L2
ENSG00000178028 DMAP1 137977 sc-eQTL 1.86e-02 -0.492 0.207 0.051 intMono L2
ENSG00000178922 HYI 897443 sc-eQTL 1.27e-01 -0.295 0.193 0.051 intMono L2
ENSG00000187147 RNF220 -53762 sc-eQTL 8.79e-01 -0.0283 0.185 0.051 intMono L2
ENSG00000198198 SZT2 961550 sc-eQTL 9.92e-01 -0.00196 0.2 0.051 intMono L2
ENSG00000198520 ARMH1 -323260 sc-eQTL 5.46e-01 0.129 0.214 0.051 intMono L2
ENSG00000222009 BTBD19 -457050 sc-eQTL 8.51e-02 -0.337 0.194 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 983358 eQTL 0.0212 0.0729 0.0316 0.0 0.0 0.0672
ENSG00000117399 CDC20 992451 eQTL 0.0489 0.0534 0.0271 0.0 0.0 0.0672
ENSG00000117408 IPO13 404482 eQTL 7.92e-06 0.141 0.0314 0.0 0.0 0.0672
ENSG00000117410 ATP6V0B 376945 eQTL 0.00166 0.0586 0.0186 0.0 0.0 0.0672
ENSG00000142949 PTPRF 826245 pQTL 0.00502 -0.142 0.0504 0.0 0.0 0.0715
ENSG00000159214 CCDC24 360073 eQTL 0.00611 0.196 0.0715 0.0 0.0 0.0672
ENSG00000178028 DMAP1 137977 eQTL 1.47e-35 -0.483 0.0373 0.0 0.0 0.0672
ENSG00000229431 AL139289.1 966319 eQTL 0.00433 0.217 0.0759 0.00196 0.0 0.0672

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 983358 2.69e-07 1.25e-07 4.69e-08 1.82e-07 9.16e-08 9.9e-08 1.49e-07 5.53e-08 1.44e-07 5.42e-08 1.62e-07 8.68e-08 1.45e-07 6.76e-08 6.17e-08 7.3e-08 4.17e-08 1.27e-07 5.75e-08 4.23e-08 1.21e-07 1.27e-07 1.39e-07 2.95e-08 1.4e-07 1.21e-07 1.07e-07 9.61e-08 1.12e-07 1.07e-07 9.7e-08 2.9e-08 3.43e-08 8e-08 6.67e-08 3.14e-08 5.45e-08 8.63e-08 6.63e-08 4.19e-08 5.14e-08 1.33e-07 5.08e-08 1.52e-08 4.7e-08 1.86e-08 1.18e-07 1.93e-09 4.69e-08
ENSG00000117399 CDC20 992451 2.69e-07 1.25e-07 4.69e-08 1.82e-07 9.16e-08 9.9e-08 1.49e-07 5.53e-08 1.44e-07 5.42e-08 1.62e-07 8.68e-08 1.41e-07 6.56e-08 6.17e-08 7.37e-08 4.17e-08 1.27e-07 5.75e-08 4.23e-08 1.21e-07 1.28e-07 1.39e-07 2.95e-08 1.4e-07 1.14e-07 1.07e-07 9.65e-08 1.09e-07 1.07e-07 9.7e-08 3.1e-08 3.43e-08 8e-08 7.02e-08 3.14e-08 5.59e-08 8.93e-08 6.63e-08 4.19e-08 5.13e-08 1.33e-07 4.89e-08 1.55e-08 4.7e-08 1.86e-08 1.18e-07 1.92e-09 4.69e-08
ENSG00000117408 IPO13 404482 1.09e-06 8.16e-07 2.06e-07 3.43e-07 9.6e-08 3.32e-07 6.87e-07 2.84e-07 6.92e-07 2.85e-07 1.08e-06 5.45e-07 1.16e-06 2.06e-07 3.58e-07 3.35e-07 6.83e-07 5.16e-07 3.51e-07 3.96e-07 2.62e-07 5.66e-07 4.69e-07 3.32e-07 1.35e-06 2.37e-07 4.62e-07 4.29e-07 6.62e-07 8.38e-07 4.34e-07 3.72e-08 1.78e-07 3.03e-07 3.29e-07 3.38e-07 3.26e-07 1.41e-07 1.61e-07 9.81e-09 1.92e-07 7.7e-07 6.24e-08 1.23e-08 1.89e-07 5.94e-08 1.67e-07 8.31e-08 1.11e-07
ENSG00000117410 ATP6V0B 376945 1.31e-06 8.9e-07 2.75e-07 4.4e-07 1.4e-07 4.23e-07 8.36e-07 3.27e-07 8.7e-07 3.28e-07 1.15e-06 5.73e-07 1.48e-06 2.29e-07 4.05e-07 4.11e-07 7.73e-07 5.53e-07 3.77e-07 4.95e-07 3.07e-07 8.11e-07 5.87e-07 4.66e-07 1.54e-06 2.9e-07 5.43e-07 5.31e-07 8.16e-07 9.3e-07 4.59e-07 5.02e-08 2.43e-07 4.51e-07 3.96e-07 4.15e-07 4.12e-07 1.47e-07 1.71e-07 7.66e-08 2.44e-07 9.76e-07 6.28e-08 1.93e-08 1.59e-07 7.5e-08 1.71e-07 3.7e-08 1.58e-07
ENSG00000132768 \N 381432 1.29e-06 9.07e-07 2.7e-07 4.03e-07 1.19e-07 4.08e-07 7.96e-07 3.28e-07 8.29e-07 3.13e-07 1.1e-06 5.62e-07 1.37e-06 2.09e-07 4.03e-07 4.19e-07 7.66e-07 5.33e-07 4e-07 4.65e-07 2.93e-07 7.58e-07 5.66e-07 4.79e-07 1.54e-06 2.7e-07 5.05e-07 4.98e-07 7.69e-07 9.11e-07 4.54e-07 4.97e-08 2.29e-07 4.04e-07 3.6e-07 3.96e-07 4.16e-07 1.45e-07 1.5e-07 4.28e-08 2.18e-07 9.58e-07 6.87e-08 1.29e-08 1.69e-07 7.36e-08 1.9e-07 5.45e-08 1.47e-07
ENSG00000178028 DMAP1 137977 4.27e-06 4.74e-06 9.13e-07 2.95e-06 1.35e-06 1.57e-06 4.27e-06 1.09e-06 4.99e-06 2.44e-06 5.26e-06 3.49e-06 7.47e-06 2.37e-06 1.41e-06 2.66e-06 1.74e-06 3.22e-06 1.33e-06 1.17e-06 2.67e-06 4.47e-06 3.47e-06 1.36e-06 5.08e-06 1.72e-06 2.55e-06 1.82e-06 4.26e-06 4.14e-06 2.68e-06 5.42e-07 5.4e-07 1.55e-06 2.13e-06 1.18e-06 1e-06 4.58e-07 9.26e-07 4.89e-07 6.13e-07 5.18e-06 3.82e-07 1.85e-07 4.86e-07 6.92e-07 8.39e-07 6.72e-07 4.39e-07