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Genes within 1Mb (chr1:44315371:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 665222 sc-eQTL 9.19e-01 0.0242 0.237 0.051 B_Activated L2
ENSG00000066322 ELOVL1 947297 sc-eQTL 7.40e-01 0.0813 0.245 0.051 B_Activated L2
ENSG00000070785 EIF2B3 -671351 sc-eQTL 1.45e-01 0.329 0.225 0.051 B_Activated L2
ENSG00000117408 IPO13 368421 sc-eQTL 9.31e-01 0.0182 0.211 0.051 B_Activated L2
ENSG00000117410 ATP6V0B 340884 sc-eQTL 8.28e-01 -0.0453 0.208 0.051 B_Activated L2
ENSG00000117411 B4GALT2 336428 sc-eQTL 2.25e-01 -0.235 0.193 0.051 B_Activated L2
ENSG00000117419 ERI3 -39889 sc-eQTL 1.48e-01 -0.355 0.244 0.051 B_Activated L2
ENSG00000117425 PTCH2 -527882 sc-eQTL 5.30e-01 -0.0864 0.137 0.051 B_Activated L2
ENSG00000126088 UROD -695579 sc-eQTL 1.85e-01 0.315 0.236 0.051 B_Activated L2
ENSG00000126091 ST3GAL3 609547 sc-eQTL 4.08e-01 -0.183 0.221 0.051 B_Activated L2
ENSG00000126106 TMEM53 -359110 sc-eQTL 4.50e-01 0.152 0.2 0.051 B_Activated L2
ENSG00000126107 HECTD3 -695953 sc-eQTL 5.46e-01 0.139 0.23 0.051 B_Activated L2
ENSG00000132768 DPH2 345371 sc-eQTL 2.79e-01 -0.251 0.231 0.051 B_Activated L2
ENSG00000142937 RPS8 -459880 sc-eQTL 2.99e-01 0.123 0.118 0.051 B_Activated L2
ENSG00000159214 CCDC24 324012 sc-eQTL 7.26e-01 -0.0699 0.199 0.051 B_Activated L2
ENSG00000159479 MED8 925563 sc-eQTL 4.76e-01 0.164 0.23 0.051 B_Activated L2
ENSG00000173846 PLK3 -485006 sc-eQTL 3.74e-01 0.191 0.215 0.051 B_Activated L2
ENSG00000178028 DMAP1 101916 sc-eQTL 4.27e-01 -0.193 0.242 0.051 B_Activated L2
ENSG00000178922 HYI 861382 sc-eQTL 2.99e-01 -0.234 0.224 0.051 B_Activated L2
ENSG00000187147 RNF220 -89823 sc-eQTL 8.32e-01 0.0469 0.22 0.051 B_Activated L2
ENSG00000198198 SZT2 925489 sc-eQTL 7.63e-01 0.066 0.219 0.051 B_Activated L2
ENSG00000198520 ARMH1 -359321 sc-eQTL 7.55e-02 -0.383 0.214 0.051 B_Activated L2
ENSG00000066135 KDM4A 665222 sc-eQTL 5.68e-01 -0.125 0.218 0.053 NK_HLA L2
ENSG00000066322 ELOVL1 947297 sc-eQTL 4.68e-01 0.151 0.207 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -671351 sc-eQTL 3.84e-01 0.184 0.211 0.053 NK_HLA L2
ENSG00000117408 IPO13 368421 sc-eQTL 8.54e-01 -0.0365 0.198 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 340884 sc-eQTL 5.39e-01 -0.126 0.205 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 336428 sc-eQTL 5.51e-01 -0.114 0.191 0.053 NK_HLA L2
ENSG00000117419 ERI3 -39889 sc-eQTL 4.43e-01 -0.164 0.214 0.053 NK_HLA L2
ENSG00000126088 UROD -695579 sc-eQTL 1.28e-02 0.528 0.21 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 609547 sc-eQTL 1.65e-01 0.294 0.211 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -359110 sc-eQTL 5.50e-01 0.121 0.202 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -695953 sc-eQTL 1.96e-01 0.292 0.225 0.053 NK_HLA L2
ENSG00000132768 DPH2 345371 sc-eQTL 8.02e-01 -0.0547 0.218 0.053 NK_HLA L2
ENSG00000142937 RPS8 -459880 sc-eQTL 4.00e-02 0.189 0.0914 0.053 NK_HLA L2
ENSG00000159214 CCDC24 324012 sc-eQTL 1.46e-01 -0.285 0.195 0.053 NK_HLA L2
ENSG00000159479 MED8 925563 sc-eQTL 3.98e-01 -0.192 0.227 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -990838 sc-eQTL 1.65e-01 0.261 0.188 0.053 NK_HLA L2
ENSG00000173846 PLK3 -485006 sc-eQTL 5.82e-01 0.105 0.191 0.053 NK_HLA L2
ENSG00000178028 DMAP1 101916 sc-eQTL 9.83e-01 -0.00468 0.215 0.053 NK_HLA L2
ENSG00000178922 HYI 861382 sc-eQTL 7.32e-01 0.0703 0.205 0.053 NK_HLA L2
ENSG00000187147 RNF220 -89823 sc-eQTL 3.13e-01 0.186 0.184 0.053 NK_HLA L2
ENSG00000198198 SZT2 925489 sc-eQTL 8.75e-01 -0.0287 0.182 0.053 NK_HLA L2
ENSG00000066135 KDM4A 665222 sc-eQTL 4.44e-01 0.163 0.213 0.051 intMono L2
ENSG00000066322 ELOVL1 947297 sc-eQTL 4.32e-01 0.147 0.187 0.051 intMono L2
ENSG00000070785 EIF2B3 -671351 sc-eQTL 4.45e-01 -0.164 0.214 0.051 intMono L2
ENSG00000117408 IPO13 368421 sc-eQTL 1.01e-01 -0.327 0.198 0.051 intMono L2
ENSG00000117410 ATP6V0B 340884 sc-eQTL 7.10e-01 -0.048 0.129 0.051 intMono L2
ENSG00000117419 ERI3 -39889 sc-eQTL 6.32e-01 -0.101 0.211 0.051 intMono L2
ENSG00000117425 PTCH2 -527882 sc-eQTL 2.87e-01 0.186 0.174 0.051 intMono L2
ENSG00000126088 UROD -695579 sc-eQTL 4.21e-01 -0.168 0.209 0.051 intMono L2
ENSG00000126091 ST3GAL3 609547 sc-eQTL 9.50e-01 -0.0126 0.202 0.051 intMono L2
ENSG00000126106 TMEM53 -359110 sc-eQTL 3.75e-01 0.175 0.197 0.051 intMono L2
ENSG00000126107 HECTD3 -695953 sc-eQTL 4.64e-01 0.151 0.206 0.051 intMono L2
ENSG00000132768 DPH2 345371 sc-eQTL 8.84e-01 -0.0299 0.205 0.051 intMono L2
ENSG00000142937 RPS8 -459880 sc-eQTL 7.29e-01 0.0306 0.0881 0.051 intMono L2
ENSG00000159214 CCDC24 324012 sc-eQTL 4.44e-01 0.148 0.193 0.051 intMono L2
ENSG00000159479 MED8 925563 sc-eQTL 1.02e-01 0.273 0.166 0.051 intMono L2
ENSG00000173846 PLK3 -485006 sc-eQTL 2.18e-01 -0.18 0.146 0.051 intMono L2
ENSG00000178028 DMAP1 101916 sc-eQTL 1.86e-02 -0.492 0.207 0.051 intMono L2
ENSG00000178922 HYI 861382 sc-eQTL 1.27e-01 -0.295 0.193 0.051 intMono L2
ENSG00000187147 RNF220 -89823 sc-eQTL 8.79e-01 -0.0283 0.185 0.051 intMono L2
ENSG00000198198 SZT2 925489 sc-eQTL 9.92e-01 -0.00196 0.2 0.051 intMono L2
ENSG00000198520 ARMH1 -359321 sc-eQTL 5.46e-01 0.129 0.214 0.051 intMono L2
ENSG00000222009 BTBD19 -493111 sc-eQTL 8.51e-02 -0.337 0.194 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 947297 eQTL 0.0268 0.0698 0.0315 0.0 0.0 0.0687
ENSG00000117399 CDC20 956390 eQTL 0.0469 0.0538 0.027 0.00102 0.0 0.0687
ENSG00000117408 IPO13 368421 eQTL 6.84e-06 0.142 0.0313 0.0 0.0 0.0687
ENSG00000117410 ATP6V0B 340884 eQTL 0.00127 0.0598 0.0185 0.0 0.0 0.0687
ENSG00000142949 PTPRF 790184 pQTL 0.00362 -0.146 0.0501 0.0 0.0 0.0737
ENSG00000159214 CCDC24 324012 eQTL 0.00459 0.202 0.0713 0.0 0.0 0.0687
ENSG00000178028 DMAP1 101916 eQTL 2.23e-36 -0.487 0.0371 0.00185 0.00336 0.0687
ENSG00000229431 AL139289.1 930258 eQTL 0.00509 0.212 0.0757 0.00182 0.0 0.0687

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 947297 3.71e-07 1.7e-07 6.86e-08 2.25e-07 9.8e-08 7.75e-08 2.24e-07 5.53e-08 1.71e-07 9.72e-08 1.69e-07 1.23e-07 2.45e-07 8.55e-08 6.2e-08 9.11e-08 4.18e-08 1.77e-07 7.42e-08 6.16e-08 1.26e-07 1.65e-07 1.64e-07 3.07e-08 2.37e-07 1.31e-07 1.22e-07 1.42e-07 1.32e-07 1.06e-07 1.22e-07 4.32e-08 3.38e-08 9.81e-08 5.16e-08 3.11e-08 3.91e-08 9.03e-08 6.28e-08 6.79e-08 6.07e-08 1.55e-07 3.02e-08 1.43e-08 3.61e-08 6.39e-09 8.46e-08 2.1e-09 4.69e-08
ENSG00000117399 CDC20 956390 3.62e-07 1.59e-07 6.45e-08 2.25e-07 9.87e-08 8.75e-08 2.24e-07 5.53e-08 1.71e-07 9.35e-08 1.66e-07 1.23e-07 2.45e-07 8.55e-08 6.2e-08 9.01e-08 4.45e-08 1.77e-07 7.36e-08 6.16e-08 1.18e-07 1.65e-07 1.64e-07 3.07e-08 2.28e-07 1.26e-07 1.2e-07 1.36e-07 1.31e-07 1.06e-07 1.22e-07 3.68e-08 3.29e-08 9.8e-08 4.78e-08 3.05e-08 4.43e-08 8.68e-08 6.41e-08 6.67e-08 6e-08 1.55e-07 3.25e-08 1.43e-08 3.61e-08 6.39e-09 8.74e-08 2.07e-09 4.85e-08
ENSG00000117408 IPO13 368421 1.89e-06 2.24e-06 2.59e-07 1.42e-06 3.36e-07 6.95e-07 1.31e-06 3.98e-07 1.74e-06 7.22e-07 1.93e-06 1.18e-06 2.75e-06 9.52e-07 4.59e-07 1.06e-06 1.07e-06 1.16e-06 5.4e-07 4.92e-07 6.15e-07 1.96e-06 1.54e-06 5.67e-07 2.63e-06 8.02e-07 1.05e-06 1.06e-06 1.69e-06 1.31e-06 7.57e-07 2.61e-07 3.19e-07 5.89e-07 8.07e-07 6.26e-07 7.71e-07 2.95e-07 5.09e-07 2.26e-07 2.83e-07 2.51e-06 4.33e-07 1.06e-07 2.86e-07 3.04e-07 2.47e-07 9.32e-08 1.85e-07
ENSG00000117410 ATP6V0B 340884 2.22e-06 2.59e-06 3.32e-07 1.71e-06 3.82e-07 7.92e-07 1.38e-06 4.06e-07 1.74e-06 7.24e-07 1.99e-06 1.34e-06 3.35e-06 1.43e-06 7.19e-07 1.21e-06 1.03e-06 1.33e-06 6.65e-07 7.62e-07 6.7e-07 2.26e-06 1.75e-06 7.85e-07 2.95e-06 1.02e-06 1.13e-06 1.37e-06 1.63e-06 1.64e-06 1.18e-06 2.49e-07 3.98e-07 5.83e-07 8.99e-07 6.3e-07 6.99e-07 3.5e-07 5.07e-07 1.88e-07 2.81e-07 2.99e-06 4.36e-07 1.32e-07 3.97e-07 3.17e-07 2.8e-07 1.69e-07 2.6e-07
ENSG00000132768 \N 345371 2.14e-06 2.67e-06 3.1e-07 1.64e-06 3.75e-07 7.96e-07 1.3e-06 4.08e-07 1.63e-06 7.98e-07 1.97e-06 1.32e-06 3.28e-06 1.31e-06 6.59e-07 1.2e-06 1.1e-06 1.34e-06 6.25e-07 6.87e-07 6.59e-07 2.15e-06 1.79e-06 7.1e-07 2.84e-06 9.84e-07 1.12e-06 1.3e-06 1.69e-06 1.59e-06 1.07e-06 2.31e-07 3.61e-07 5.91e-07 8.59e-07 6.23e-07 7.06e-07 3.59e-07 5e-07 2.03e-07 2.79e-07 2.84e-06 4.14e-07 1.31e-07 3.55e-07 3.13e-07 3.01e-07 1.45e-07 2.44e-07
ENSG00000178028 DMAP1 101916 1.03e-05 1.27e-05 2e-06 7.23e-06 2.38e-06 5.16e-06 1.31e-05 1.93e-06 1.06e-05 5.49e-06 1.45e-05 5.74e-06 1.88e-05 4.33e-06 3.54e-06 6.99e-06 5.51e-06 7.92e-06 3.09e-06 2.83e-06 5.97e-06 1.07e-05 1.01e-05 3.29e-06 1.9e-05 4.44e-06 5.83e-06 4.73e-06 1.22e-05 9.59e-06 7.01e-06 1.06e-06 1.12e-06 3.1e-06 4.89e-06 2.68e-06 1.84e-06 1.91e-06 2.19e-06 9.86e-07 8.61e-07 1.57e-05 1.4e-06 1.47e-07 7.78e-07 1.72e-06 1.46e-06 7.83e-07 4.72e-07