Genes within 1Mb (chr1:44309881:G:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 659732 sc-eQTL 5.81e-01 -0.123 0.223 0.05 NK_HLA L2
ENSG00000066322 ELOVL1 941807 sc-eQTL 6.14e-01 0.107 0.212 0.05 NK_HLA L2
ENSG00000070785 EIF2B3 -676841 sc-eQTL 4.92e-01 0.149 0.216 0.05 NK_HLA L2
ENSG00000117408 IPO13 362931 sc-eQTL 8.17e-01 -0.0471 0.203 0.05 NK_HLA L2
ENSG00000117410 ATP6V0B 335394 sc-eQTL 6.07e-01 -0.108 0.21 0.05 NK_HLA L2
ENSG00000117411 B4GALT2 330938 sc-eQTL 5.10e-01 -0.129 0.195 0.05 NK_HLA L2
ENSG00000117419 ERI3 -45379 sc-eQTL 3.50e-01 -0.204 0.218 0.05 NK_HLA L2
ENSG00000126088 UROD -701069 sc-eQTL 2.13e-02 0.501 0.216 0.05 NK_HLA L2
ENSG00000126091 ST3GAL3 604057 sc-eQTL 1.74e-01 0.294 0.216 0.05 NK_HLA L2
ENSG00000126106 TMEM53 -364600 sc-eQTL 4.41e-01 0.16 0.207 0.05 NK_HLA L2
ENSG00000126107 HECTD3 -701443 sc-eQTL 1.54e-01 0.329 0.23 0.05 NK_HLA L2
ENSG00000132768 DPH2 339881 sc-eQTL 5.86e-01 -0.122 0.223 0.05 NK_HLA L2
ENSG00000142937 RPS8 -465370 sc-eQTL 6.69e-02 0.173 0.0938 0.05 NK_HLA L2
ENSG00000159214 CCDC24 318522 sc-eQTL 1.95e-01 -0.26 0.2 0.05 NK_HLA L2
ENSG00000159479 MED8 920073 sc-eQTL 5.00e-01 -0.157 0.232 0.05 NK_HLA L2
ENSG00000162415 ZSWIM5 -996328 sc-eQTL 1.43e-01 0.283 0.192 0.05 NK_HLA L2
ENSG00000173846 PLK3 -490496 sc-eQTL 6.90e-01 0.0781 0.196 0.05 NK_HLA L2
ENSG00000178028 DMAP1 96426 sc-eQTL 8.85e-01 0.0319 0.22 0.05 NK_HLA L2
ENSG00000178922 HYI 855892 sc-eQTL 7.07e-01 0.079 0.21 0.05 NK_HLA L2
ENSG00000187147 RNF220 -95313 sc-eQTL 1.50e-01 0.272 0.188 0.05 NK_HLA L2
ENSG00000198198 SZT2 919999 sc-eQTL 9.44e-01 0.0131 0.187 0.05 NK_HLA L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 941807 eQTL 0.0269 0.0698 0.0315 0.0 0.0 0.0687
ENSG00000117399 CDC20 950900 eQTL 0.0469 0.0538 0.027 0.00102 0.0 0.0687
ENSG00000117408 IPO13 362931 eQTL 6.85e-06 0.142 0.0313 0.0 0.0 0.0687
ENSG00000117410 ATP6V0B 335394 eQTL 0.00127 0.0598 0.0185 0.0 0.0 0.0687
ENSG00000142949 PTPRF 784694 pQTL 0.00362 -0.146 0.0501 0.0 0.0 0.0737
ENSG00000159214 CCDC24 318522 eQTL 0.0046 0.202 0.0713 0.0 0.0 0.0687
ENSG00000178028 DMAP1 96426 eQTL 2.23e-36 -0.487 0.0371 0.00185 0.00339 0.0687
ENSG00000229431 AL139289.1 924768 eQTL 0.0051 0.212 0.0757 0.00182 0.0 0.0687


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 941807 2.76e-07 1.42e-07 6.04e-08 2.15e-07 1.06e-07 8.33e-08 1.81e-07 5.56e-08 1.66e-07 8.53e-08 1.62e-07 1.22e-07 1.79e-07 8e-08 6.12e-08 8.71e-08 4.18e-08 1.72e-07 7.18e-08 5.75e-08 1.22e-07 1.39e-07 1.5e-07 2.68e-08 2.02e-07 1.43e-07 1.22e-07 1.28e-07 1.26e-07 9.88e-08 1.09e-07 4.77e-08 3.38e-08 9.3e-08 3.97e-08 2.79e-08 3.7e-08 8.25e-08 6.39e-08 6.55e-08 5.09e-08 1.46e-07 5.21e-08 1.43e-08 3.07e-08 6.53e-09 9.96e-08 1.98e-09 4.83e-08
ENSG00000117399 CDC20 950900 2.76e-07 1.42e-07 6.04e-08 2.09e-07 1.06e-07 8.33e-08 1.81e-07 5.56e-08 1.66e-07 8.53e-08 1.59e-07 1.22e-07 1.79e-07 8e-08 5.97e-08 8.71e-08 4.18e-08 1.64e-07 7.18e-08 5.87e-08 1.22e-07 1.39e-07 1.5e-07 2.83e-08 1.98e-07 1.39e-07 1.22e-07 1.28e-07 1.24e-07 9.88e-08 1.06e-07 4.69e-08 3.29e-08 8.89e-08 3.36e-08 2.74e-08 3.91e-08 8.25e-08 6.28e-08 6.55e-08 5.03e-08 1.46e-07 5.21e-08 1.44e-08 2.64e-08 6.53e-09 9.96e-08 1.98e-09 4.83e-08
ENSG00000117408 IPO13 362931 1.27e-06 9.59e-07 3.14e-07 1.15e-06 3.88e-07 4.7e-07 1.34e-06 3.81e-07 1.41e-06 5.98e-07 1.67e-06 7.37e-07 1.98e-06 2.81e-07 5.06e-07 9.85e-07 8.13e-07 6.58e-07 8.26e-07 5.11e-07 7.54e-07 1.45e-06 8.96e-07 6.54e-07 2.26e-06 6.68e-07 9.37e-07 8.98e-07 1.24e-06 1.12e-06 6.97e-07 2.62e-07 2.51e-07 6.8e-07 5.28e-07 4.54e-07 6.81e-07 2.44e-07 4.67e-07 2.11e-07 3.58e-07 1.51e-06 5.53e-08 9e-08 1.79e-07 2.15e-07 2.37e-07 3.77e-08 2.46e-07
ENSG00000117410 ATP6V0B 335394 1.29e-06 1.13e-06 2.45e-07 1.32e-06 4.92e-07 5.88e-07 1.61e-06 4.44e-07 1.7e-06 6.28e-07 1.85e-06 8.26e-07 2.34e-06 2.79e-07 3.96e-07 1.02e-06 8.94e-07 8e-07 8.04e-07 4.65e-07 7.54e-07 1.69e-06 8.35e-07 5.66e-07 2.28e-06 7.75e-07 1.03e-06 9.87e-07 1.46e-06 1.24e-06 7.69e-07 2.49e-07 2.77e-07 6.58e-07 5.99e-07 4.86e-07 7.42e-07 3.16e-07 4.58e-07 2.26e-07 3.04e-07 1.46e-06 6.21e-08 1.32e-07 3.24e-07 2.88e-07 2.38e-07 1.15e-07 2.83e-07
ENSG00000132768 \N 339881 1.26e-06 1.08e-06 2.28e-07 1.27e-06 4.7e-07 5.96e-07 1.63e-06 4.35e-07 1.67e-06 6.05e-07 1.88e-06 8.77e-07 2.29e-06 2.95e-07 4.03e-07 9.98e-07 8.89e-07 7.83e-07 8.3e-07 4.58e-07 7.79e-07 1.71e-06 8.68e-07 5.43e-07 2.26e-06 7.43e-07 1.03e-06 9.81e-07 1.38e-06 1.26e-06 7.58e-07 2.46e-07 2.88e-07 6.86e-07 5.64e-07 4.91e-07 7.36e-07 3.1e-07 4.78e-07 2.23e-07 2.88e-07 1.47e-06 5.07e-08 1.31e-07 2.98e-07 2.47e-07 2.57e-07 9.26e-08 2.91e-07
ENSG00000178028 DMAP1 96426 6.69e-06 9.37e-06 1.3e-06 6.07e-06 2.35e-06 3.7e-06 9.65e-06 2.14e-06 9.26e-06 4.92e-06 1.09e-05 5.23e-06 1.31e-05 3.84e-06 3.01e-06 6.54e-06 3.87e-06 5.96e-06 2.7e-06 2.73e-06 5.02e-06 8.59e-06 7e-06 3.3e-06 1.34e-05 4.28e-06 5.98e-06 4.62e-06 8.97e-06 7.76e-06 4.81e-06 1.05e-06 1.21e-06 3.24e-06 4.71e-06 2.7e-06 1.79e-06 2.02e-06 2.2e-06 1.1e-06 1.48e-06 1.08e-05 1.02e-06 2.66e-07 7.16e-07 1.76e-06 1.46e-06 7.5e-07 4.42e-07