Genes within 1Mb (chr1:44301299:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 933225 eQTL 2.88e-02 0.0688 0.0314 0.0 0.0 0.0697
ENSG00000117399 CDC20 942318 eQTL 4.76e-02 0.0535 0.027 0.00101 0.0 0.0697
ENSG00000117408 IPO13 354349 eQTL 6.04e-06 0.142 0.0312 0.0 0.0 0.0697
ENSG00000117410 ATP6V0B 326812 eQTL 1.01e-03 0.0609 0.0185 0.0 0.0 0.0697
ENSG00000142949 PTPRF 776112 pQTL 3.44e-03 -0.146 0.0499 0.0 0.0 0.0744
ENSG00000159214 CCDC24 309940 eQTL 3.97e-03 0.205 0.0711 0.0 0.0 0.0697
ENSG00000178028 DMAP1 87844 eQTL 1.36e-36 -0.488 0.037 0.00407 0.00674 0.0697
ENSG00000229431 AL139289.1 916186 eQTL 5.21e-03 0.212 0.0755 0.00182 0.0 0.0697


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 933225 2.66e-07 1.11e-07 3.39e-08 1.79e-07 9.65e-08 9.32e-08 1.42e-07 5.21e-08 1.41e-07 4.23e-08 1.62e-07 8.03e-08 1.27e-07 6.38e-08 5.44e-08 7.87e-08 4.63e-08 1.07e-07 5.12e-08 3.29e-08 1.03e-07 1.33e-07 1.29e-07 5.01e-08 1.31e-07 1.09e-07 1.13e-07 8.45e-08 9.97e-08 1.09e-07 9.58e-08 3.52e-08 2.75e-08 8.3e-08 8.99e-08 4.02e-08 4.85e-08 8.75e-08 8.14e-08 3.69e-08 3.71e-08 1.37e-07 4.23e-08 3.97e-08 1.01e-07 1.78e-08 1.45e-07 4.82e-09 4.72e-08
ENSG00000117399 CDC20 942318 2.66e-07 1.11e-07 3.39e-08 1.78e-07 9.65e-08 9.32e-08 1.42e-07 5.21e-08 1.41e-07 4.23e-08 1.62e-07 8.03e-08 1.27e-07 6.38e-08 5.44e-08 7.87e-08 4.63e-08 1.07e-07 5.12e-08 3.15e-08 1.03e-07 1.33e-07 1.29e-07 5.01e-08 1.31e-07 1.09e-07 1.13e-07 8.45e-08 9.97e-08 1.1e-07 9.58e-08 3.52e-08 2.75e-08 8.3e-08 8.99e-08 4.02e-08 4.85e-08 8.75e-08 8.14e-08 3.69e-08 3.71e-08 1.37e-07 4.36e-08 4.13e-08 1.01e-07 1.78e-08 1.45e-07 4.82e-09 4.72e-08
ENSG00000117408 IPO13 354349 9.14e-07 9.82e-07 1.03e-07 3.38e-07 1.12e-07 2.64e-07 6.08e-07 7.56e-08 8.08e-07 1.89e-07 1.07e-06 5.08e-07 9.44e-07 3.03e-07 3.58e-07 1.33e-07 6.37e-07 3.44e-07 9.71e-08 8.1e-08 1.6e-07 3.15e-07 3.03e-07 3.83e-08 1.13e-06 2.13e-07 2.43e-07 1.95e-07 2.78e-07 3.15e-07 4.71e-07 4.32e-08 3.56e-08 1.71e-07 3.26e-07 6.52e-08 6.95e-08 8.63e-08 4.75e-08 6.79e-08 4.35e-08 5.44e-07 2.32e-08 1.75e-08 4e-08 1.01e-08 9.96e-08 3.78e-09 4.85e-08
ENSG00000117410 ATP6V0B 326812 1.21e-06 1.07e-06 1.31e-07 5.92e-07 1.14e-07 3.26e-07 7e-07 8.37e-08 1.14e-06 2.37e-07 1.26e-06 5.75e-07 1.2e-06 2.82e-07 4.55e-07 1.84e-07 7.72e-07 4.11e-07 1.62e-07 8.25e-08 1.86e-07 4.38e-07 3.77e-07 7.94e-08 1.52e-06 2.39e-07 3.1e-07 2.65e-07 3.99e-07 5.17e-07 5.67e-07 4.58e-08 3.96e-08 2.33e-07 3.67e-07 9.51e-08 1.06e-07 8.2e-08 5.89e-08 7.9e-08 4.39e-08 7.52e-07 2.99e-08 1.95e-08 7.93e-08 8.94e-09 7.83e-08 1.9e-09 4.94e-08
ENSG00000132768 \N 331299 1.11e-06 1.03e-06 1.27e-07 5.17e-07 1.11e-07 3.32e-07 6.87e-07 8.17e-08 1.11e-06 2.34e-07 1.24e-06 5.5e-07 1.1e-06 2.95e-07 4.3e-07 1.75e-07 7.66e-07 3.95e-07 1.55e-07 8.41e-08 1.89e-07 4.14e-07 3.7e-07 7.22e-08 1.47e-06 2.4e-07 2.94e-07 2.54e-07 3.86e-07 4.61e-07 5.62e-07 4.43e-08 3.89e-08 2.19e-07 3.21e-07 7.57e-08 1.03e-07 8.37e-08 5.7e-08 8.09e-08 3.57e-08 7.04e-07 2.88e-08 1.92e-08 6.59e-08 8.76e-09 8.67e-08 1.89e-09 4.94e-08
ENSG00000178028 DMAP1 87844 9.14e-06 1.86e-05 1.67e-06 7.29e-06 2.4e-06 4.22e-06 1.18e-05 1.86e-06 1.51e-05 5.43e-06 1.6e-05 6.53e-06 1.66e-05 7.67e-06 4.37e-06 6.54e-06 6.23e-06 7.6e-06 2.62e-06 2.27e-06 5.1e-06 1.1e-05 6.89e-06 3.21e-06 2.16e-05 3.12e-06 6.4e-06 4.49e-06 8.97e-06 7.73e-06 1.04e-05 9.46e-07 5.37e-07 3.29e-06 4.81e-06 2.08e-06 1.79e-06 4.82e-07 1.46e-06 8.28e-07 2.54e-07 1.17e-05 1.47e-06 1.47e-07 7.56e-07 8.07e-07 8.85e-07 7.35e-07 4.68e-07