Genes within 1Mb (chr1:44238196:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 588047 sc-eQTL 5.81e-01 -0.123 0.223 0.05 NK_HLA L2
ENSG00000066322 ELOVL1 870122 sc-eQTL 6.14e-01 0.107 0.212 0.05 NK_HLA L2
ENSG00000070785 EIF2B3 -748526 sc-eQTL 4.92e-01 0.149 0.216 0.05 NK_HLA L2
ENSG00000117395 EBNA1BP2 967260 sc-eQTL 9.20e-01 -0.0231 0.23 0.05 NK_HLA L2
ENSG00000117408 IPO13 291246 sc-eQTL 8.17e-01 -0.0471 0.203 0.05 NK_HLA L2
ENSG00000117410 ATP6V0B 263709 sc-eQTL 6.07e-01 -0.108 0.21 0.05 NK_HLA L2
ENSG00000117411 B4GALT2 259253 sc-eQTL 5.10e-01 -0.129 0.195 0.05 NK_HLA L2
ENSG00000117419 ERI3 -117064 sc-eQTL 3.50e-01 -0.204 0.218 0.05 NK_HLA L2
ENSG00000126088 UROD -772754 sc-eQTL 2.13e-02 0.501 0.216 0.05 NK_HLA L2
ENSG00000126091 ST3GAL3 532372 sc-eQTL 1.74e-01 0.294 0.216 0.05 NK_HLA L2
ENSG00000126106 TMEM53 -436285 sc-eQTL 4.41e-01 0.16 0.207 0.05 NK_HLA L2
ENSG00000126107 HECTD3 -773128 sc-eQTL 1.54e-01 0.329 0.23 0.05 NK_HLA L2
ENSG00000132768 DPH2 268196 sc-eQTL 5.86e-01 -0.122 0.223 0.05 NK_HLA L2
ENSG00000142937 RPS8 -537055 sc-eQTL 6.69e-02 0.173 0.0938 0.05 NK_HLA L2
ENSG00000159214 CCDC24 246837 sc-eQTL 1.95e-01 -0.26 0.2 0.05 NK_HLA L2
ENSG00000159479 MED8 848388 sc-eQTL 5.00e-01 -0.157 0.232 0.05 NK_HLA L2
ENSG00000173846 PLK3 -562181 sc-eQTL 6.90e-01 0.0781 0.196 0.05 NK_HLA L2
ENSG00000178028 DMAP1 24741 sc-eQTL 8.85e-01 0.0319 0.22 0.05 NK_HLA L2
ENSG00000178922 HYI 784207 sc-eQTL 7.07e-01 0.079 0.21 0.05 NK_HLA L2
ENSG00000187147 RNF220 -166998 sc-eQTL 1.50e-01 0.272 0.188 0.05 NK_HLA L2
ENSG00000198198 SZT2 848314 sc-eQTL 9.44e-01 0.0131 0.187 0.05 NK_HLA L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 870122 eQTL 0.0369 0.0649 0.0311 0.0 0.0 0.0702
ENSG00000117399 CDC20 879215 eQTL 0.0495 0.0524 0.0266 0.0 0.0 0.0702
ENSG00000117408 IPO13 291246 eQTL 4.59e-06 0.142 0.0309 0.0 0.0 0.0702
ENSG00000117410 ATP6V0B 263709 eQTL 0.00064 0.0625 0.0182 0.0 0.0 0.0702
ENSG00000117411 B4GALT2 259253 eQTL 0.0945 0.0829 0.0495 0.00111 0.0 0.0702
ENSG00000142949 PTPRF 713009 pQTL 0.00342 -0.144 0.0491 0.0 0.0 0.0751
ENSG00000159214 CCDC24 246837 eQTL 0.00255 0.213 0.0702 0.0 0.0 0.0702
ENSG00000178028 DMAP1 24741 eQTL 5.1600000000000005e-37 -0.485 0.0365 0.0239 0.0279 0.0702
ENSG00000229431 AL139289.1 853083 eQTL 0.00622 0.205 0.0746 0.0017 0.0 0.0702


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 870122 2.66e-07 1.08e-07 3.28e-08 1.68e-07 1.02e-07 9.05e-08 1.39e-07 5.29e-08 1.32e-07 3.99e-08 1.63e-07 7.49e-08 1.21e-07 6.07e-08 4.77e-08 7.76e-08 5.12e-08 1.06e-07 5.12e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.19e-08 1.33e-07 1.03e-07 1.11e-07 8.27e-08 1.05e-07 1.09e-07 9.5e-08 3.29e-08 2.6e-08 8.26e-08 9.27e-08 4.14e-08 5.09e-08 8.48e-08 8.44e-08 3.87e-08 2.6e-08 1.37e-07 4.34e-08 1.32e-08 1.12e-07 1.8e-08 1.47e-07 4.96e-09 4.72e-08
ENSG00000117399 CDC20 879215 2.6e-07 1.08e-07 3.34e-08 1.68e-07 1.02e-07 9.05e-08 1.39e-07 5.29e-08 1.32e-07 3.99e-08 1.63e-07 7.49e-08 1.21e-07 6.07e-08 4.77e-08 7.76e-08 5.12e-08 1.06e-07 5.12e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.19e-08 1.33e-07 1.03e-07 1.11e-07 8.27e-08 1.05e-07 1.09e-07 9.5e-08 3.29e-08 2.6e-08 8.26e-08 9.27e-08 4.14e-08 5.09e-08 8.48e-08 8.44e-08 3.87e-08 2.6e-08 1.37e-07 4.34e-08 1.38e-08 1.12e-07 1.8e-08 1.47e-07 4.96e-09 4.72e-08
ENSG00000117408 IPO13 291246 8.63e-07 8.34e-07 1.59e-07 4.43e-07 1.03e-07 2.09e-07 6.51e-07 5.68e-08 2.78e-07 1.15e-07 1.22e-06 2.33e-07 9.97e-07 2.05e-07 1.45e-07 1.49e-07 5.27e-07 3.82e-07 1.51e-07 4.21e-08 1.87e-07 3.8e-07 2.81e-07 3.59e-08 1.22e-06 1.86e-07 1.87e-07 1.12e-07 2.66e-07 6.81e-07 2.73e-07 3.88e-08 3.3e-08 1.73e-07 3.24e-07 3.36e-08 4.54e-08 9.36e-08 6.57e-08 3.87e-08 3.27e-08 1.43e-06 3.18e-08 1.22e-08 4.99e-08 1.3e-08 1.22e-07 4.04e-09 4.85e-08
ENSG00000117410 ATP6V0B 263709 1.25e-06 9.34e-07 3.08e-07 3.38e-07 1.1e-07 3.32e-07 1.02e-06 6.72e-08 4.74e-07 1.89e-07 1.39e-06 3.62e-07 1.48e-06 2.57e-07 2.81e-07 2.1e-07 7.68e-07 4.16e-07 2.51e-07 5.33e-08 2.5e-07 5.76e-07 3.87e-07 5.11e-08 1.79e-06 2.33e-07 3.04e-07 1.48e-07 4.33e-07 9.3e-07 3.93e-07 3.95e-08 3.96e-08 2.35e-07 4.4e-07 5.14e-08 6.39e-08 9.17e-08 6.5e-08 4.55e-08 4.44e-08 1.55e-06 1.6e-08 2.63e-08 9.95e-08 1.33e-08 1.19e-07 3.83e-09 5.04e-08
ENSG00000132768 \N 268196 1.17e-06 9.28e-07 2.93e-07 3.15e-07 9.93e-08 3.08e-07 9.74e-07 6.57e-08 4.3e-07 1.7e-07 1.39e-06 3.61e-07 1.34e-06 2.67e-07 2.44e-07 2.05e-07 7.39e-07 4.39e-07 2.17e-07 5.07e-08 2.38e-07 5.34e-07 3.77e-07 4.81e-08 1.72e-06 2.29e-07 2.71e-07 1.44e-07 4.06e-07 8.63e-07 3.77e-07 3.95e-08 3.89e-08 2.19e-07 4.05e-07 5.23e-08 5.71e-08 8.76e-08 6.28e-08 4.47e-08 4.27e-08 1.49e-06 2.28e-08 1.95e-08 8.68e-08 1.25e-08 1.21e-07 3.86e-09 4.91e-08
ENSG00000178028 DMAP1 24741 8.78e-05 5.65e-05 8.75e-06 1.88e-05 8.24e-06 2.28e-05 6.49e-05 6.2e-06 4.72e-05 2.01e-05 5.89e-05 2.71e-05 7.88e-05 2.08e-05 1.07e-05 3.12e-05 2.74e-05 3.23e-05 1.24e-05 8.56e-06 2.26e-05 5.66e-05 4.56e-05 1.27e-05 7.2e-05 1.28e-05 2.12e-05 1.69e-05 4.8e-05 3.01e-05 3.45e-05 2.22e-06 4.16e-06 8.84e-06 1.43e-05 7.51e-06 3.69e-06 3.2e-06 6.34e-06 3.94e-06 1.97e-06 6.43e-05 5.16e-06 3.6e-07 3.2e-06 5.2e-06 6.16e-06 2.06e-06 1.56e-06