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Genes within 1Mb (chr1:44182956:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 532807 sc-eQTL 9.19e-01 0.0242 0.237 0.051 B_Activated L2
ENSG00000066322 ELOVL1 814882 sc-eQTL 7.40e-01 0.0813 0.245 0.051 B_Activated L2
ENSG00000070785 EIF2B3 -803766 sc-eQTL 1.45e-01 0.329 0.225 0.051 B_Activated L2
ENSG00000117395 EBNA1BP2 912020 sc-eQTL 3.51e-01 -0.229 0.245 0.051 B_Activated L2
ENSG00000117408 IPO13 236006 sc-eQTL 9.31e-01 0.0182 0.211 0.051 B_Activated L2
ENSG00000117410 ATP6V0B 208469 sc-eQTL 8.28e-01 -0.0453 0.208 0.051 B_Activated L2
ENSG00000117411 B4GALT2 204013 sc-eQTL 2.25e-01 -0.235 0.193 0.051 B_Activated L2
ENSG00000117419 ERI3 -172304 sc-eQTL 1.48e-01 -0.355 0.244 0.051 B_Activated L2
ENSG00000117425 PTCH2 -660297 sc-eQTL 5.30e-01 -0.0864 0.137 0.051 B_Activated L2
ENSG00000126088 UROD -827994 sc-eQTL 1.85e-01 0.315 0.236 0.051 B_Activated L2
ENSG00000126091 ST3GAL3 477132 sc-eQTL 4.08e-01 -0.183 0.221 0.051 B_Activated L2
ENSG00000126106 TMEM53 -491525 sc-eQTL 4.50e-01 0.152 0.2 0.051 B_Activated L2
ENSG00000126107 HECTD3 -828368 sc-eQTL 5.46e-01 0.139 0.23 0.051 B_Activated L2
ENSG00000132768 DPH2 212956 sc-eQTL 2.79e-01 -0.251 0.231 0.051 B_Activated L2
ENSG00000142937 RPS8 -592295 sc-eQTL 2.99e-01 0.123 0.118 0.051 B_Activated L2
ENSG00000159214 CCDC24 191597 sc-eQTL 7.26e-01 -0.0699 0.199 0.051 B_Activated L2
ENSG00000159479 MED8 793148 sc-eQTL 4.76e-01 0.164 0.23 0.051 B_Activated L2
ENSG00000173846 PLK3 -617421 sc-eQTL 3.74e-01 0.191 0.215 0.051 B_Activated L2
ENSG00000178028 DMAP1 -30499 sc-eQTL 4.27e-01 -0.193 0.242 0.051 B_Activated L2
ENSG00000178922 HYI 728967 sc-eQTL 2.99e-01 -0.234 0.224 0.051 B_Activated L2
ENSG00000187147 RNF220 -222238 sc-eQTL 8.32e-01 0.0469 0.22 0.051 B_Activated L2
ENSG00000198198 SZT2 793074 sc-eQTL 7.63e-01 0.066 0.219 0.051 B_Activated L2
ENSG00000198520 ARMH1 -491736 sc-eQTL 7.55e-02 -0.383 0.214 0.051 B_Activated L2
ENSG00000066135 KDM4A 532807 sc-eQTL 5.68e-01 -0.125 0.218 0.053 NK_HLA L2
ENSG00000066322 ELOVL1 814882 sc-eQTL 4.68e-01 0.151 0.207 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -803766 sc-eQTL 3.84e-01 0.184 0.211 0.053 NK_HLA L2
ENSG00000117395 EBNA1BP2 912020 sc-eQTL 8.46e-01 0.0436 0.225 0.053 NK_HLA L2
ENSG00000117408 IPO13 236006 sc-eQTL 8.54e-01 -0.0365 0.198 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 208469 sc-eQTL 5.39e-01 -0.126 0.205 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 204013 sc-eQTL 5.51e-01 -0.114 0.191 0.053 NK_HLA L2
ENSG00000117419 ERI3 -172304 sc-eQTL 4.43e-01 -0.164 0.214 0.053 NK_HLA L2
ENSG00000126088 UROD -827994 sc-eQTL 1.28e-02 0.528 0.21 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 477132 sc-eQTL 1.65e-01 0.294 0.211 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -491525 sc-eQTL 5.50e-01 0.121 0.202 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -828368 sc-eQTL 1.96e-01 0.292 0.225 0.053 NK_HLA L2
ENSG00000132768 DPH2 212956 sc-eQTL 8.02e-01 -0.0547 0.218 0.053 NK_HLA L2
ENSG00000142937 RPS8 -592295 sc-eQTL 4.00e-02 0.189 0.0914 0.053 NK_HLA L2
ENSG00000159214 CCDC24 191597 sc-eQTL 1.46e-01 -0.285 0.195 0.053 NK_HLA L2
ENSG00000159479 MED8 793148 sc-eQTL 3.98e-01 -0.192 0.227 0.053 NK_HLA L2
ENSG00000173846 PLK3 -617421 sc-eQTL 5.82e-01 0.105 0.191 0.053 NK_HLA L2
ENSG00000178028 DMAP1 -30499 sc-eQTL 9.83e-01 -0.00468 0.215 0.053 NK_HLA L2
ENSG00000178922 HYI 728967 sc-eQTL 7.32e-01 0.0703 0.205 0.053 NK_HLA L2
ENSG00000187147 RNF220 -222238 sc-eQTL 3.13e-01 0.186 0.184 0.053 NK_HLA L2
ENSG00000198198 SZT2 793074 sc-eQTL 8.75e-01 -0.0287 0.182 0.053 NK_HLA L2
ENSG00000066135 KDM4A 532807 sc-eQTL 4.44e-01 0.163 0.213 0.051 intMono L2
ENSG00000066322 ELOVL1 814882 sc-eQTL 4.32e-01 0.147 0.187 0.051 intMono L2
ENSG00000070785 EIF2B3 -803766 sc-eQTL 4.45e-01 -0.164 0.214 0.051 intMono L2
ENSG00000117395 EBNA1BP2 912020 sc-eQTL 5.80e-01 -0.118 0.213 0.051 intMono L2
ENSG00000117408 IPO13 236006 sc-eQTL 1.01e-01 -0.327 0.198 0.051 intMono L2
ENSG00000117410 ATP6V0B 208469 sc-eQTL 7.10e-01 -0.048 0.129 0.051 intMono L2
ENSG00000117419 ERI3 -172304 sc-eQTL 6.32e-01 -0.101 0.211 0.051 intMono L2
ENSG00000117425 PTCH2 -660297 sc-eQTL 2.87e-01 0.186 0.174 0.051 intMono L2
ENSG00000126088 UROD -827994 sc-eQTL 4.21e-01 -0.168 0.209 0.051 intMono L2
ENSG00000126091 ST3GAL3 477132 sc-eQTL 9.50e-01 -0.0126 0.202 0.051 intMono L2
ENSG00000126106 TMEM53 -491525 sc-eQTL 3.75e-01 0.175 0.197 0.051 intMono L2
ENSG00000126107 HECTD3 -828368 sc-eQTL 4.64e-01 0.151 0.206 0.051 intMono L2
ENSG00000132768 DPH2 212956 sc-eQTL 8.84e-01 -0.0299 0.205 0.051 intMono L2
ENSG00000142937 RPS8 -592295 sc-eQTL 7.29e-01 0.0306 0.0881 0.051 intMono L2
ENSG00000159214 CCDC24 191597 sc-eQTL 4.44e-01 0.148 0.193 0.051 intMono L2
ENSG00000159479 MED8 793148 sc-eQTL 1.02e-01 0.273 0.166 0.051 intMono L2
ENSG00000173846 PLK3 -617421 sc-eQTL 2.18e-01 -0.18 0.146 0.051 intMono L2
ENSG00000178028 DMAP1 -30499 sc-eQTL 1.86e-02 -0.492 0.207 0.051 intMono L2
ENSG00000178922 HYI 728967 sc-eQTL 1.27e-01 -0.295 0.193 0.051 intMono L2
ENSG00000187147 RNF220 -222238 sc-eQTL 8.79e-01 -0.0283 0.185 0.051 intMono L2
ENSG00000198198 SZT2 793074 sc-eQTL 9.92e-01 -0.00196 0.2 0.051 intMono L2
ENSG00000198520 ARMH1 -491736 sc-eQTL 5.46e-01 0.129 0.214 0.051 intMono L2
ENSG00000222009 BTBD19 -625526 sc-eQTL 8.51e-02 -0.337 0.194 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 814882 eQTL 0.0414 0.0629 0.0308 0.0 0.0 0.0702
ENSG00000117408 IPO13 236006 eQTL 3.79e-06 0.142 0.0306 0.0 0.0 0.0702
ENSG00000117410 ATP6V0B 208469 eQTL 0.000547 0.0627 0.0181 0.0 0.0 0.0702
ENSG00000117411 B4GALT2 204013 eQTL 0.0795 0.0862 0.0491 0.00121 0.0 0.0702
ENSG00000142949 PTPRF 657769 pQTL 0.00354 -0.142 0.0486 0.0 0.0 0.0751
ENSG00000159214 CCDC24 191597 eQTL 0.00204 0.215 0.0696 0.0 0.0 0.0702
ENSG00000178028 DMAP1 -30499 eQTL 4.6700000000000005e-37 -0.481 0.0362 0.0489 0.0475 0.0702
ENSG00000229431 AL139289.1 797843 eQTL 0.00663 0.201 0.074 0.00167 0.0 0.0702

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 814882 3.14e-07 1.5e-07 6.26e-08 2.05e-07 1.03e-07 8.21e-08 2.16e-07 6.12e-08 1.85e-07 9.35e-08 1.76e-07 1.31e-07 2.24e-07 8.13e-08 5.69e-08 9.01e-08 4.35e-08 1.77e-07 6.92e-08 5.07e-08 1.22e-07 1.65e-07 1.58e-07 3.07e-08 2.02e-07 1.39e-07 1.22e-07 1.04e-07 1.32e-07 1.05e-07 1.26e-07 3.99e-08 3.21e-08 9.58e-08 3.02e-08 2.74e-08 5.51e-08 8.76e-08 6.42e-08 4.41e-08 5.77e-08 1.52e-07 5.22e-08 1.34e-08 3.41e-08 1.65e-08 8.81e-08 1.91e-09 4.8e-08
ENSG00000117399 \N 823975 3.14e-07 1.5e-07 5.91e-08 2.05e-07 1.03e-07 8.21e-08 2.1e-07 6.12e-08 1.75e-07 9.35e-08 1.76e-07 1.31e-07 2.24e-07 8.13e-08 5.69e-08 8.71e-08 4.35e-08 1.77e-07 6.92e-08 4.95e-08 1.22e-07 1.56e-07 1.58e-07 3.22e-08 2.02e-07 1.31e-07 1.2e-07 1.04e-07 1.32e-07 1.03e-07 1.21e-07 3.93e-08 3.21e-08 9.81e-08 2.97e-08 2.68e-08 5.42e-08 8.63e-08 6.76e-08 4.08e-08 5.65e-08 1.5e-07 5.39e-08 1.88e-08 3.41e-08 1.65e-08 9.29e-08 1.9e-09 4.8e-08
ENSG00000117408 IPO13 236006 2.02e-06 2.13e-06 2.72e-07 1.42e-06 4.94e-07 7.17e-07 1.31e-06 6.43e-07 1.69e-06 7.34e-07 1.99e-06 1.45e-06 3.24e-06 6.86e-07 5.05e-07 1.19e-06 9.86e-07 1.62e-06 6.25e-07 8.94e-07 8.63e-07 2.24e-06 1.82e-06 1.02e-06 2.59e-06 1.2e-06 1.21e-06 1.04e-06 1.69e-06 1.59e-06 1.08e-06 3.04e-07 4.61e-07 1.24e-06 9.13e-07 7.46e-07 7.76e-07 3.21e-07 8.03e-07 3.35e-07 2.4e-07 2.45e-06 3.92e-07 1.99e-07 3.48e-07 2.98e-07 6.08e-07 2.2e-07 2e-07
ENSG00000117419 \N -172304 3.99e-06 3.5e-06 7.79e-07 1.88e-06 1.06e-06 8.42e-07 2.48e-06 9.55e-07 3.13e-06 1.61e-06 3.71e-06 2.51e-06 5.69e-06 1.4e-06 1.03e-06 2.35e-06 1.77e-06 2.39e-06 1.45e-06 8.79e-07 1.9e-06 3.7e-06 3.21e-06 1.77e-06 4.51e-06 1.33e-06 2.15e-06 1.72e-06 3.78e-06 2.81e-06 2.03e-06 5.26e-07 7.75e-07 1.89e-06 1.84e-06 8.71e-07 9.28e-07 4.52e-07 1.23e-06 3.98e-07 6.91e-07 3.89e-06 4.11e-07 1.55e-07 4.39e-07 3.22e-07 7.75e-07 2.72e-07 3.42e-07
ENSG00000132768 \N 212956 2.74e-06 2.68e-06 3.67e-07 1.7e-06 5.79e-07 8.11e-07 1.82e-06 8.27e-07 1.93e-06 9.48e-07 2.53e-06 1.35e-06 3.43e-06 1.12e-06 9.3e-07 1.7e-06 1.17e-06 2.3e-06 9.86e-07 1.32e-06 1.16e-06 3.02e-06 2.16e-06 1.01e-06 3.42e-06 1.16e-06 1.42e-06 1.51e-06 1.98e-06 1.66e-06 1.8e-06 3.82e-07 5.43e-07 1.43e-06 9.93e-07 9.47e-07 9.08e-07 4.24e-07 1.21e-06 4.35e-07 3.2e-07 2.94e-06 5.55e-07 1.86e-07 3.4e-07 3.38e-07 8.09e-07 1.95e-07 1.58e-07
ENSG00000178028 DMAP1 -30499 1.49e-05 1.55e-05 4.04e-06 1.2e-05 4.07e-06 9.8e-06 2.29e-05 3.74e-06 1.76e-05 8.72e-06 2.19e-05 8.71e-06 3.13e-05 6.49e-06 5.11e-06 1.11e-05 1.02e-05 1.69e-05 6.78e-06 5.4e-06 9.81e-06 1.79e-05 1.77e-05 8.57e-06 2.91e-05 6.09e-06 8.89e-06 7.57e-06 1.91e-05 2.09e-05 1.21e-05 1.64e-06 2.5e-06 7.83e-06 8.27e-06 5.34e-06 3.82e-06 3.13e-06 4.75e-06 3.57e-06 1.92e-06 2.12e-05 2.71e-06 5.74e-07 2.71e-06 3.41e-06 3.75e-06 1.65e-06 1.52e-06