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Genes within 1Mb (chr1:44176161:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 526012 sc-eQTL 9.19e-01 0.0242 0.237 0.051 B_Activated L2
ENSG00000066322 ELOVL1 808087 sc-eQTL 7.40e-01 0.0813 0.245 0.051 B_Activated L2
ENSG00000070785 EIF2B3 -810561 sc-eQTL 1.45e-01 0.329 0.225 0.051 B_Activated L2
ENSG00000117395 EBNA1BP2 905225 sc-eQTL 3.51e-01 -0.229 0.245 0.051 B_Activated L2
ENSG00000117408 IPO13 229211 sc-eQTL 9.31e-01 0.0182 0.211 0.051 B_Activated L2
ENSG00000117410 ATP6V0B 201674 sc-eQTL 8.28e-01 -0.0453 0.208 0.051 B_Activated L2
ENSG00000117411 B4GALT2 197218 sc-eQTL 2.25e-01 -0.235 0.193 0.051 B_Activated L2
ENSG00000117419 ERI3 -179099 sc-eQTL 1.48e-01 -0.355 0.244 0.051 B_Activated L2
ENSG00000117425 PTCH2 -667092 sc-eQTL 5.30e-01 -0.0864 0.137 0.051 B_Activated L2
ENSG00000126088 UROD -834789 sc-eQTL 1.85e-01 0.315 0.236 0.051 B_Activated L2
ENSG00000126091 ST3GAL3 470337 sc-eQTL 4.08e-01 -0.183 0.221 0.051 B_Activated L2
ENSG00000126106 TMEM53 -498320 sc-eQTL 4.50e-01 0.152 0.2 0.051 B_Activated L2
ENSG00000126107 HECTD3 -835163 sc-eQTL 5.46e-01 0.139 0.23 0.051 B_Activated L2
ENSG00000132768 DPH2 206161 sc-eQTL 2.79e-01 -0.251 0.231 0.051 B_Activated L2
ENSG00000142937 RPS8 -599090 sc-eQTL 2.99e-01 0.123 0.118 0.051 B_Activated L2
ENSG00000159214 CCDC24 184802 sc-eQTL 7.26e-01 -0.0699 0.199 0.051 B_Activated L2
ENSG00000159479 MED8 786353 sc-eQTL 4.76e-01 0.164 0.23 0.051 B_Activated L2
ENSG00000173846 PLK3 -624216 sc-eQTL 3.74e-01 0.191 0.215 0.051 B_Activated L2
ENSG00000178028 DMAP1 -37294 sc-eQTL 4.27e-01 -0.193 0.242 0.051 B_Activated L2
ENSG00000178922 HYI 722172 sc-eQTL 2.99e-01 -0.234 0.224 0.051 B_Activated L2
ENSG00000187147 RNF220 -229033 sc-eQTL 8.32e-01 0.0469 0.22 0.051 B_Activated L2
ENSG00000198198 SZT2 786279 sc-eQTL 7.63e-01 0.066 0.219 0.051 B_Activated L2
ENSG00000198520 ARMH1 -498531 sc-eQTL 7.55e-02 -0.383 0.214 0.051 B_Activated L2
ENSG00000066135 KDM4A 526012 sc-eQTL 5.68e-01 -0.125 0.218 0.053 NK_HLA L2
ENSG00000066322 ELOVL1 808087 sc-eQTL 4.68e-01 0.151 0.207 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -810561 sc-eQTL 3.84e-01 0.184 0.211 0.053 NK_HLA L2
ENSG00000117395 EBNA1BP2 905225 sc-eQTL 8.46e-01 0.0436 0.225 0.053 NK_HLA L2
ENSG00000117408 IPO13 229211 sc-eQTL 8.54e-01 -0.0365 0.198 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 201674 sc-eQTL 5.39e-01 -0.126 0.205 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 197218 sc-eQTL 5.51e-01 -0.114 0.191 0.053 NK_HLA L2
ENSG00000117419 ERI3 -179099 sc-eQTL 4.43e-01 -0.164 0.214 0.053 NK_HLA L2
ENSG00000126088 UROD -834789 sc-eQTL 1.28e-02 0.528 0.21 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 470337 sc-eQTL 1.65e-01 0.294 0.211 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -498320 sc-eQTL 5.50e-01 0.121 0.202 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -835163 sc-eQTL 1.96e-01 0.292 0.225 0.053 NK_HLA L2
ENSG00000132768 DPH2 206161 sc-eQTL 8.02e-01 -0.0547 0.218 0.053 NK_HLA L2
ENSG00000142937 RPS8 -599090 sc-eQTL 4.00e-02 0.189 0.0914 0.053 NK_HLA L2
ENSG00000159214 CCDC24 184802 sc-eQTL 1.46e-01 -0.285 0.195 0.053 NK_HLA L2
ENSG00000159479 MED8 786353 sc-eQTL 3.98e-01 -0.192 0.227 0.053 NK_HLA L2
ENSG00000173846 PLK3 -624216 sc-eQTL 5.82e-01 0.105 0.191 0.053 NK_HLA L2
ENSG00000178028 DMAP1 -37294 sc-eQTL 9.83e-01 -0.00468 0.215 0.053 NK_HLA L2
ENSG00000178922 HYI 722172 sc-eQTL 7.32e-01 0.0703 0.205 0.053 NK_HLA L2
ENSG00000187147 RNF220 -229033 sc-eQTL 3.13e-01 0.186 0.184 0.053 NK_HLA L2
ENSG00000198198 SZT2 786279 sc-eQTL 8.75e-01 -0.0287 0.182 0.053 NK_HLA L2
ENSG00000066135 KDM4A 526012 sc-eQTL 4.44e-01 0.163 0.213 0.051 intMono L2
ENSG00000066322 ELOVL1 808087 sc-eQTL 4.32e-01 0.147 0.187 0.051 intMono L2
ENSG00000070785 EIF2B3 -810561 sc-eQTL 4.45e-01 -0.164 0.214 0.051 intMono L2
ENSG00000117395 EBNA1BP2 905225 sc-eQTL 5.80e-01 -0.118 0.213 0.051 intMono L2
ENSG00000117408 IPO13 229211 sc-eQTL 1.01e-01 -0.327 0.198 0.051 intMono L2
ENSG00000117410 ATP6V0B 201674 sc-eQTL 7.10e-01 -0.048 0.129 0.051 intMono L2
ENSG00000117419 ERI3 -179099 sc-eQTL 6.32e-01 -0.101 0.211 0.051 intMono L2
ENSG00000117425 PTCH2 -667092 sc-eQTL 2.87e-01 0.186 0.174 0.051 intMono L2
ENSG00000126088 UROD -834789 sc-eQTL 4.21e-01 -0.168 0.209 0.051 intMono L2
ENSG00000126091 ST3GAL3 470337 sc-eQTL 9.50e-01 -0.0126 0.202 0.051 intMono L2
ENSG00000126106 TMEM53 -498320 sc-eQTL 3.75e-01 0.175 0.197 0.051 intMono L2
ENSG00000126107 HECTD3 -835163 sc-eQTL 4.64e-01 0.151 0.206 0.051 intMono L2
ENSG00000132768 DPH2 206161 sc-eQTL 8.84e-01 -0.0299 0.205 0.051 intMono L2
ENSG00000142937 RPS8 -599090 sc-eQTL 7.29e-01 0.0306 0.0881 0.051 intMono L2
ENSG00000159214 CCDC24 184802 sc-eQTL 4.44e-01 0.148 0.193 0.051 intMono L2
ENSG00000159479 MED8 786353 sc-eQTL 1.02e-01 0.273 0.166 0.051 intMono L2
ENSG00000173846 PLK3 -624216 sc-eQTL 2.18e-01 -0.18 0.146 0.051 intMono L2
ENSG00000178028 DMAP1 -37294 sc-eQTL 1.86e-02 -0.492 0.207 0.051 intMono L2
ENSG00000178922 HYI 722172 sc-eQTL 1.27e-01 -0.295 0.193 0.051 intMono L2
ENSG00000187147 RNF220 -229033 sc-eQTL 8.79e-01 -0.0283 0.185 0.051 intMono L2
ENSG00000198198 SZT2 786279 sc-eQTL 9.92e-01 -0.00196 0.2 0.051 intMono L2
ENSG00000198520 ARMH1 -498531 sc-eQTL 5.46e-01 0.129 0.214 0.051 intMono L2
ENSG00000222009 BTBD19 -632321 sc-eQTL 8.51e-02 -0.337 0.194 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 808087 eQTL 0.0455 0.0611 0.0305 0.0 0.0 0.0707
ENSG00000117408 IPO13 229211 eQTL 3.3e-06 0.142 0.0303 0.0 0.0 0.0707
ENSG00000117410 ATP6V0B 201674 eQTL 0.000489 0.0626 0.0179 0.0 0.0 0.0707
ENSG00000117411 B4GALT2 197218 eQTL 0.0703 0.0881 0.0486 0.00127 0.0 0.0707
ENSG00000117419 ERI3 -179099 eQTL 0.0481 -0.0471 0.0238 0.0 0.0 0.0707
ENSG00000142949 PTPRF 650974 pQTL 0.00369 -0.14 0.0481 0.0 0.0 0.0759
ENSG00000159214 CCDC24 184802 eQTL 0.00176 0.216 0.0689 0.0 0.0 0.0707
ENSG00000178028 DMAP1 -37294 eQTL 6.3100000000000004e-37 -0.475 0.0359 0.0559 0.0464 0.0707
ENSG00000229431 AL139289.1 791048 eQTL 0.00741 0.197 0.0733 0.0016 0.0 0.0707

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 808087 2.61e-07 1.1e-07 3.59e-08 1.82e-07 8.92e-08 9.87e-08 1.41e-07 5.33e-08 1.41e-07 4.38e-08 1.6e-07 7.75e-08 1.3e-07 6.21e-08 5.4e-08 7.5e-08 4.48e-08 1.14e-07 5.21e-08 4.03e-08 1.04e-07 1.28e-07 1.26e-07 4.13e-08 1.31e-07 1.19e-07 1.12e-07 9.15e-08 1.02e-07 1.12e-07 9.58e-08 4.22e-08 3.28e-08 8.65e-08 8.98e-08 3.93e-08 5.03e-08 9.68e-08 7.52e-08 3.18e-08 3.95e-08 1.35e-07 4.12e-08 3.23e-08 7.79e-08 1.69e-08 1.23e-07 3.95e-09 5.09e-08
ENSG00000117408 IPO13 229211 1.26e-06 9.19e-07 2.52e-07 5.88e-07 1.79e-07 4.49e-07 1.02e-06 3.49e-07 9.89e-07 3.28e-07 1.25e-06 5.76e-07 1.57e-06 2.61e-07 4.21e-07 5.87e-07 7.43e-07 5.67e-07 4.95e-07 4.71e-07 3.39e-07 8.11e-07 6.63e-07 5.25e-07 1.85e-06 2.7e-07 6.23e-07 5.67e-07 8.81e-07 1e-06 4.65e-07 4.94e-08 2.33e-07 4.51e-07 4.25e-07 4.34e-07 4.12e-07 1.51e-07 2.17e-07 7.66e-08 3.02e-07 1.3e-06 7.23e-08 4.16e-08 1.82e-07 5.38e-08 1.6e-07 8.31e-08 9.42e-08
ENSG00000117419 ERI3 -179099 1.28e-06 1.25e-06 3.14e-07 1.3e-06 3.45e-07 6.45e-07 1.48e-06 3.81e-07 1.52e-06 6.23e-07 1.88e-06 8.15e-07 2.46e-06 2.98e-07 5.4e-07 9.48e-07 8.94e-07 7.83e-07 8.04e-07 5.23e-07 7.95e-07 1.72e-06 8.94e-07 5.66e-07 2.25e-06 6.01e-07 9.35e-07 9.43e-07 1.45e-06 1.23e-06 7.41e-07 2.56e-07 2.85e-07 6.08e-07 5.67e-07 5.24e-07 6.79e-07 2.73e-07 4.89e-07 3e-07 2.96e-07 1.68e-06 9.42e-08 1.31e-07 2.11e-07 1.27e-07 2.33e-07 8.15e-08 1.82e-07
ENSG00000132768 \N 206161 1.27e-06 9.47e-07 2.77e-07 9.83e-07 2.69e-07 5.88e-07 1.34e-06 3.37e-07 1.15e-06 3.99e-07 1.39e-06 6.02e-07 2.02e-06 2.67e-07 4.26e-07 8.11e-07 8.26e-07 5.47e-07 7.25e-07 6.99e-07 4.77e-07 1.2e-06 8.6e-07 6.2e-07 2.06e-06 3.59e-07 7.12e-07 7.14e-07 1.18e-06 1.22e-06 5.58e-07 1.57e-07 2.19e-07 6.53e-07 5.95e-07 4.4e-07 5.19e-07 1.55e-07 3.73e-07 2.48e-07 2.87e-07 1.47e-06 7.72e-08 7.3e-08 1.81e-07 8.76e-08 2.21e-07 7e-08 1.11e-07
ENSG00000178028 DMAP1 -37294 8.31e-06 9.76e-06 1.33e-06 5.17e-06 2.4e-06 4.58e-06 1.06e-05 1.81e-06 8.69e-06 5.05e-06 1.19e-05 5.31e-06 1.46e-05 3.63e-06 2.44e-06 6.66e-06 4.16e-06 7.08e-06 2.61e-06 2.91e-06 4.98e-06 8.33e-06 7.38e-06 3.36e-06 1.37e-05 3.49e-06 4.81e-06 3.96e-06 1.02e-05 8.95e-06 5.07e-06 9.54e-07 1.29e-06 3.24e-06 4.6e-06 2.66e-06 1.78e-06 1.91e-06 2.16e-06 9.53e-07 1.01e-06 1.18e-05 1.32e-06 1.88e-07 7.7e-07 1.62e-06 1.35e-06 7.32e-07 4.03e-07