Genes within 1Mb (chr1:44079625:T:C):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 429476 sc-eQTL 7.67e-01 0.0731 0.247 0.055 gdT L2
ENSG00000066322 ELOVL1 711551 sc-eQTL 5.10e-01 0.16 0.242 0.055 gdT L2
ENSG00000070785 EIF2B3 -907097 sc-eQTL 6.47e-01 -0.107 0.233 0.055 gdT L2
ENSG00000117395 EBNA1BP2 808689 sc-eQTL 9.36e-01 0.0197 0.243 0.055 gdT L2
ENSG00000117399 CDC20 720644 sc-eQTL 7.06e-01 0.062 0.164 0.055 gdT L2
ENSG00000117408 IPO13 132675 sc-eQTL 1.09e-03 0.737 0.221 0.055 gdT L2
ENSG00000117410 ATP6V0B 105138 sc-eQTL 2.72e-01 -0.229 0.208 0.055 gdT L2
ENSG00000117411 B4GALT2 100682 sc-eQTL 7.79e-01 -0.0604 0.215 0.055 gdT L2
ENSG00000117419 ERI3 -275635 sc-eQTL 9.93e-01 0.00228 0.253 0.055 gdT L2
ENSG00000126088 UROD -931325 sc-eQTL 7.23e-01 -0.0757 0.213 0.055 gdT L2
ENSG00000126091 ST3GAL3 373801 sc-eQTL 1.25e-01 -0.355 0.23 0.055 gdT L2
ENSG00000126106 TMEM53 -594856 sc-eQTL 3.12e-01 -0.219 0.216 0.055 gdT L2
ENSG00000126107 HECTD3 -931699 sc-eQTL 9.65e-01 0.0109 0.247 0.055 gdT L2
ENSG00000132768 DPH2 109625 sc-eQTL 8.88e-01 0.0321 0.228 0.055 gdT L2
ENSG00000142937 RPS8 -695626 sc-eQTL 3.99e-01 -0.0772 0.0912 0.055 gdT L2
ENSG00000142945 KIF2C -660193 sc-eQTL 3.24e-01 -0.133 0.135 0.055 gdT L2
ENSG00000159479 MED8 689817 sc-eQTL 3.60e-01 -0.211 0.23 0.055 gdT L2
ENSG00000173846 PLK3 -720752 sc-eQTL 6.18e-01 0.0774 0.155 0.055 gdT L2
ENSG00000178028 DMAP1 -133830 sc-eQTL 1.02e-01 0.377 0.229 0.055 gdT L2
ENSG00000178922 HYI 625636 sc-eQTL 5.11e-01 0.157 0.239 0.055 gdT L2
ENSG00000187147 RNF220 -325569 sc-eQTL 1.37e-01 0.285 0.19 0.055 gdT L2
ENSG00000198198 SZT2 689743 sc-eQTL 8.78e-01 -0.0335 0.219 0.055 gdT L2
ENSG00000198520 ARMH1 -595067 sc-eQTL 2.55e-01 0.238 0.208 0.055 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000159214 CCDC24 88266 eQTL 3.34e-07 -0.459 0.0892 0.0 0.0 0.0378
ENSG00000178028 DMAP1 -133830 eQTL 8.15e-05 0.2 0.0505 0.0 0.0 0.0378


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066056 \N 778643 2.91e-07 1.33e-07 4.98e-08 2.05e-07 9.24e-08 9.91e-08 1.73e-07 5.43e-08 1.47e-07 5.67e-08 1.67e-07 1.08e-07 1.79e-07 7.37e-08 6.25e-08 7.23e-08 4.12e-08 1.44e-07 5.97e-08 4.21e-08 1.22e-07 1.25e-07 1.5e-07 2.87e-08 1.68e-07 1.26e-07 1.1e-07 9.92e-08 1.24e-07 1.07e-07 1.06e-07 3.68e-08 3.89e-08 8.89e-08 3.46e-08 3.28e-08 5.29e-08 9.3e-08 6.71e-08 3.6e-08 5.54e-08 1.48e-07 5.24e-08 1.11e-08 3.83e-08 1.84e-08 1.19e-07 3.8e-09 4.88e-08
ENSG00000117425 \N -763628 2.91e-07 1.42e-07 4.98e-08 2.05e-07 9.24e-08 9.48e-08 1.81e-07 5.66e-08 1.5e-07 6.08e-08 1.59e-07 1.11e-07 1.87e-07 7.64e-08 5.98e-08 7.74e-08 4.12e-08 1.51e-07 6.07e-08 4.3e-08 1.22e-07 1.26e-07 1.58e-07 3.17e-08 1.72e-07 1.26e-07 1.1e-07 9.92e-08 1.26e-07 1.05e-07 1.09e-07 3.26e-08 3.96e-08 8.7e-08 3.81e-08 3.14e-08 5.59e-08 9.36e-08 6.57e-08 3.99e-08 5.05e-08 1.5e-07 5.22e-08 1.61e-08 3.4e-08 1.84e-08 1.18e-07 3.79e-09 4.88e-08
ENSG00000159214 CCDC24 88266 5.62e-06 5.68e-06 6.39e-07 3.6e-06 1.56e-06 1.59e-06 8.05e-06 1.18e-06 4.82e-06 2.99e-06 7.34e-06 3.12e-06 9.46e-06 2.09e-06 9.99e-07 3.91e-06 2.72e-06 3.72e-06 1.56e-06 1.63e-06 2.82e-06 5.51e-06 4.66e-06 2e-06 9.05e-06 2.08e-06 2.25e-06 1.78e-06 6.08e-06 6.66e-06 2.91e-06 4.86e-07 7.94e-07 2.53e-06 1.96e-06 1.54e-06 1.13e-06 5.24e-07 1.41e-06 7.33e-07 1.03e-06 7.55e-06 6.14e-07 1.79e-07 6.87e-07 1.21e-06 1.02e-06 7.14e-07 5.85e-07
ENSG00000178028 DMAP1 -133830 4.12e-06 3.93e-06 6.04e-07 1.95e-06 8.67e-07 8.5e-07 2.84e-06 1.01e-06 2.75e-06 1.43e-06 3.8e-06 2.39e-06 6.4e-06 1.42e-06 1.03e-06 2.01e-06 1.63e-06 2.35e-06 1.42e-06 9.91e-07 1.79e-06 3.58e-06 3.47e-06 1.87e-06 4.78e-06 1.25e-06 1.57e-06 1.71e-06 3.92e-06 3.38e-06 1.96e-06 4.73e-07 7.35e-07 1.75e-06 1.8e-06 8.52e-07 9.21e-07 4.71e-07 1.23e-06 3.63e-07 5.82e-07 4.74e-06 5.74e-07 1.69e-07 3.74e-07 3.62e-07 7.99e-07 2.38e-07 1.94e-07