Genes within 1Mb (chr1:44002563:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066135 KDM4A 352414 eQTL 1.19e-02 0.0467 0.0186 0.0 0.0 0.219
ENSG00000070785 EIF2B3 -984159 eQTL 1.19e-02 -0.0508 0.0201 0.00173 0.0 0.219
ENSG00000117407 ARTN 69243 eQTL 3.62e-04 0.168 0.0468 0.0 0.0 0.219
ENSG00000117408 IPO13 55613 eQTL 5.27e-18 0.16 0.0181 0.0 0.0 0.219
ENSG00000117410 ATP6V0B 28076 eQTL 2.13e-26 0.114 0.0104 0.0 0.0 0.219
ENSG00000117411 B4GALT2 23620 eQTL 4.92e-02 0.0588 0.0299 0.0 0.0 0.219
ENSG00000126106 TMEM53 -671918 eQTL 5.54e-03 -0.0861 0.031 0.0 0.0 0.219
ENSG00000159214 CCDC24 11204 eQTL 1.24e-57 0.639 0.0372 0.0 0.0 0.219
ENSG00000159479 MED8 612755 eQTL 2.54e-02 0.0343 0.0153 0.0 0.0 0.219
ENSG00000178028 DMAP1 -210892 eQTL 3.22e-06 -0.111 0.0237 0.0 0.0 0.219
ENSG00000178922 HYI 548574 eQTL 3.57e-02 0.0518 0.0246 0.0 0.0 0.219
ENSG00000230615 AL139220.2 -27880 eQTL 6.90e-04 0.122 0.0358 0.00215 0.00116 0.219


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066135 KDM4A 352414 8.25e-07 9.09e-07 2.15e-07 1.17e-06 9.16e-08 3.2e-07 5.9e-07 1.42e-07 8.66e-07 2.87e-07 1.1e-06 4.43e-07 1.55e-06 2.65e-07 3.16e-07 2.69e-07 5.92e-07 4.11e-07 2.79e-07 4.32e-07 2.52e-07 3.92e-07 4.12e-07 2.95e-07 1.66e-06 2.53e-07 4.71e-07 3.89e-07 3.56e-07 7.71e-07 4.32e-07 1.87e-07 5.73e-08 6.69e-07 6.22e-07 3.21e-07 6.87e-07 1.51e-07 4.12e-07 2.26e-07 1.92e-07 1.08e-06 5.85e-08 1.64e-07 1.69e-07 4.53e-08 9.98e-08 8.37e-08 6.26e-08
ENSG00000117407 ARTN 69243 1.05e-05 1.38e-05 1.31e-06 7.87e-06 2.4e-06 4.9e-06 1.04e-05 2.18e-06 1.07e-05 5.34e-06 1.38e-05 6.14e-06 2.18e-05 4.76e-06 3.17e-06 6.51e-06 5.45e-06 7.72e-06 2.68e-06 2.84e-06 5.05e-06 9.68e-06 8.25e-06 3.3e-06 1.9e-05 3.8e-06 5.48e-06 4.51e-06 8.58e-06 8.58e-06 7.68e-06 1.06e-06 9.28e-07 3.28e-06 6.02e-06 2.59e-06 1.82e-06 1.95e-06 2.08e-06 1.26e-06 8.78e-07 1.57e-05 1.61e-06 1.73e-07 7.18e-07 1.68e-06 1.28e-06 7.8e-07 4.89e-07
ENSG00000117408 IPO13 55613 1.27e-05 1.68e-05 1.99e-06 9e-06 2.3e-06 5.81e-06 1.21e-05 2.27e-06 1.41e-05 6.01e-06 1.68e-05 6.83e-06 2.66e-05 6.24e-06 3.97e-06 7.34e-06 6.94e-06 9.83e-06 3.37e-06 3.23e-06 6.46e-06 1.18e-05 1.08e-05 3.36e-06 2.34e-05 4.45e-06 6.94e-06 5.24e-06 1.14e-05 1.07e-05 1.04e-05 9.7e-07 1.29e-06 3.55e-06 6.94e-06 2.78e-06 1.72e-06 2e-06 2.35e-06 1.72e-06 1.02e-06 1.89e-05 2.34e-06 1.88e-07 7.05e-07 1.7e-06 1.8e-06 8.19e-07 4.72e-07
ENSG00000117410 ATP6V0B 28076 2.1e-05 2.65e-05 3.38e-06 1.27e-05 3.16e-06 9.05e-06 2.37e-05 3.67e-06 2.08e-05 9.85e-06 2.63e-05 1.09e-05 3.74e-05 1.06e-05 5.37e-06 1.09e-05 1.1e-05 1.7e-05 5.69e-06 4.81e-06 8.88e-06 2.01e-05 1.98e-05 5.44e-06 3.26e-05 5.34e-06 8.05e-06 8.03e-06 1.79e-05 1.69e-05 1.45e-05 1.23e-06 1.44e-06 4.75e-06 9.6e-06 4.14e-06 2.27e-06 2.7e-06 3.56e-06 2.42e-06 1.25e-06 3e-05 2.67e-06 2.62e-07 1.38e-06 2.77e-06 3.18e-06 1.22e-06 9.75e-07
ENSG00000142945 \N -737255 2.64e-07 1.34e-07 4.47e-08 2.25e-07 9.01e-08 9.91e-08 1.42e-07 5.37e-08 1.45e-07 4.57e-08 1.57e-07 8.59e-08 1.59e-07 7.37e-08 6.17e-08 7.17e-08 3.98e-08 1.18e-07 5.82e-08 4.89e-08 1.08e-07 1.26e-07 1.34e-07 3.23e-08 1.5e-07 1.21e-07 1.07e-07 9.61e-08 1.05e-07 1.07e-07 9.7e-08 3.78e-08 3.26e-08 9.5e-08 3.71e-08 3.05e-08 1.13e-07 8.61e-08 6.45e-08 7.28e-08 5.28e-08 1.36e-07 5.12e-08 9.66e-08 4.92e-08 1.87e-08 1.26e-07 1.9e-09 4.94e-08
ENSG00000142949 \N 477376 3.1e-07 4e-07 8.02e-08 4.37e-07 1.07e-07 1.57e-07 2.74e-07 6.2e-08 2.6e-07 1.11e-07 2.98e-07 1.62e-07 5.81e-07 1.1e-07 8.45e-08 9.35e-08 8.64e-08 2.04e-07 8.68e-08 1.08e-07 1.39e-07 1.81e-07 1.86e-07 5.6e-08 4.54e-07 2.01e-07 1.72e-07 1.68e-07 1.39e-07 2e-07 1.71e-07 6.92e-08 3.38e-08 1.93e-07 3.38e-07 6.94e-08 5.22e-07 7.75e-08 8.61e-08 1.04e-07 4.78e-08 2.8e-07 3.55e-08 1.77e-07 5.49e-08 1.3e-08 8.81e-08 1.13e-08 4.61e-08
ENSG00000159214 CCDC24 11204 3.39e-05 3.25e-05 5.8e-06 1.53e-05 5.44e-06 1.37e-05 4.02e-05 4.5e-06 2.98e-05 1.45e-05 3.66e-05 1.7e-05 4.65e-05 1.36e-05 6.69e-06 1.73e-05 1.63e-05 2.39e-05 7.52e-06 6.5e-06 1.4e-05 3.06e-05 2.99e-05 8.53e-06 4.3e-05 7.55e-06 1.28e-05 1.18e-05 2.91e-05 2.37e-05 1.95e-05 1.64e-06 2.42e-06 6.71e-06 1.16e-05 5.45e-06 3.09e-06 3.14e-06 4.48e-06 3.15e-06 1.72e-06 3.78e-05 3.46e-06 3.55e-07 2.19e-06 3.59e-06 4.04e-06 1.48e-06 1.55e-06
ENSG00000178028 DMAP1 -210892 1.6e-06 2.88e-06 3.2e-07 2.14e-06 4.13e-07 8.16e-07 1.21e-06 4.16e-07 1.85e-06 6.94e-07 1.99e-06 1.28e-06 3.61e-06 1.43e-06 4.36e-07 9.61e-07 1.01e-06 1.13e-06 5.56e-07 1.21e-06 6.27e-07 1.92e-06 1.54e-06 9.6e-07 3.45e-06 1e-06 1.22e-06 1.15e-06 1.62e-06 1.61e-06 1.38e-06 5.08e-07 2.02e-07 1.35e-06 1.88e-06 7.22e-07 9.36e-07 4.46e-07 1.33e-06 3.62e-07 3.56e-07 3.37e-06 5.74e-07 1.76e-07 3.04e-07 3.06e-07 2.18e-07 1.83e-07 2.75e-07
ENSG00000230615 AL139220.2 -27880 2.1e-05 2.67e-05 3.38e-06 1.27e-05 3.16e-06 9.07e-06 2.37e-05 3.69e-06 2.08e-05 9.88e-06 2.63e-05 1.09e-05 3.74e-05 1.06e-05 5.37e-06 1.09e-05 1.11e-05 1.7e-05 5.69e-06 4.81e-06 9.03e-06 2.02e-05 1.98e-05 5.48e-06 3.29e-05 5.34e-06 8.18e-06 8.05e-06 1.79e-05 1.69e-05 1.45e-05 1.23e-06 1.44e-06 4.75e-06 9.6e-06 4.14e-06 2.27e-06 2.7e-06 3.56e-06 2.44e-06 1.28e-06 3e-05 2.67e-06 2.62e-07 1.37e-06 2.77e-06 3.21e-06 1.26e-06 9.71e-07